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KJC3_006342-T1, KJC3_006342-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006342-T1
Unique NameKJC3_006342-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5400110..5401431+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006342-T1 ID=KJC3_006342-T1|Name=KJC3_006342-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1322bp|location=Sequence derived from alignment at ch4:5400110..5401431+ (Aspergillus niger KJC3)
ATGACCGTTCACGGACGCGAATTCCAACAATATTCGATTGATAATGAGAT
ATCATTCCAGCCAGTTGATCGCGTAGAAACCAAGAACCTTGCACTACCGA
GAACCATGACTGACATCCCACATTACTAGGACGAAGCGAAGCGGCTCGAG
CTCCAGAATCACGTCTTCAACATGATCTTTGATAATCGGCTGATCTTCCC
GCGAGACTGTGAGCCTCAAAGAGTTCTTGATTGCGGTCACGGCGCGGGGT
CCTGGGCCATTCAGGTGGCAGAAGATTTTCCAGAATGCGAGGTCAGACCG
GGGCAAATAGCGCTGCCGTTTTTGACTGACTGACGACATAACTGAAAAGG
TTATCGGTGTTGATATATCTCCTCATATGATACCAGATGACGAAGATGAC
GATTATGATGTGGCGGAAAACTTGGAGTTTCAGGTAAGACTCCTTCCTTT
CTCTCCTGATACCTATGAACGTGCGTCTGCCTAGTGTCAAAGCACAAGAT
TCGCAAGATTCGTCTCAAATACGGATTTTCCTGTCTCTCGAGCTGTTCCC
GTCCAGATAATCTAATTTTTGATTCCGTAGGTCGACGACTTGAACCGCCC
CTTTACCTTTCCCCCTGGATATTTCGATCTCGTCAATTCGAGGATGATGG
CAGCAGGTATCGACGGATCCCGATGGTCGTCATATATACAAGACATCAAA
AGGTCCGGTTGGAAGGAGCGGGCCCTAGGGTCACGAATGCTGTGAAGATA
ATGCGAGACTGACTTCAAGGTGTAATAGAGTTTTGAAACCAGGCGGTTGG
GTGCAGTTGGTTGAAATTTACTTCAACGTCCAGTCGGATAACGGTTCGCT
CACGGAGAATCACGCATTGAGACAGTGGAGTACAAAGCTCATGAGCTCAG
TCGAAGGCGTCAAGGATCTTCGTATAGGCACCCGCCTGAGAGATCTCCTG
TTAGCAGCAGGGCTGAAGGAAGTTGAATCAACAATGATACCTGTCCCCCT
TTGCGAATGGCCTAGCGGTGAGTTCTTCCAAGCCAGTATTAGTGAGTGAA
TTTCTGACAATTCAGTAGAACCGAAAATGCGAGACATAGGCAAAGCCAAC
CGCAAGATCACCCGACGCCTGCTCGCCGCAGTAGCACTCTATCCATTGAC
CCAACGCCTGCATATGTCGCATGACGAGTTCCAGCAGCTGATCGACCAAG
CACAAAAAGAAGCGGAAAACCCAAGCTTGAAAACATATTTCCCTTTGTAA
GTAGGTCGTTCGAATGATCCGAACAGATGCTGACGGTTCAGGTACGTTGC
TATCGGACGAAAGCCGACATAG
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Coding sequence (CDS) from alignment at ch4:5400110..5401431+

>KJC3_006342-T1 ID=KJC3_006342-T1|Name=KJC3_006342-T1|organism=Aspergillus niger KJC3|type=CDS|length=6216bp|location=Sequence derived from alignment at ch4:5400110..5401431+ (Aspergillus niger KJC3)
ATGACCGTTCACGGACGCGAATTCCAACAATATTCGATTGATAATGAGAT
ATCATTCCAGCCAGTTGATCGCGACGAAGCGAAGCGGCTCGAGCTCCAGA
ATCACGTCTTCAACATGATCTTTGATAATCGGCTGATCTTCCCGCGAGAC
TGTGAGCCTCAAAGAGTTCTTGATTGCGGTCACGGCGCGGGGTCCTGGGC
CATTCAGGTGGCAGAAGATTTTCCAGAATGCGAGGTTATCGGTGTTGATA
TATCTCCTCATATGATACCAGATGACGAAGATGACGATTATGATGTGGCG
GAAAACTTGGAGTTTCAGGTCGACGACTTGAACCGCCCCTTTACCTTTCC
CCCTGGATATTTCGATCTCGTCAATTCGAGGATGATGGCAGCAGGTATCG
ACGGATCCCGATGGTCGTCATATATACAAGACATCAAAAGAGTTTTGAAA
CCAGGCGGTTGGGTGCAGTTGGTTGAAATTTACTTCAACGTCCAGTCGGA
TAACGGTTCGCTCACGGAGAATCACGCATTGAGACAGTGGAGTACAAAGC
TCATGAGCTCAGTCGAAGGCGTCAAGGATCTTCGTATAGGCACCCGCCTG
AGAGATCTCCTGTTAGCAGCAGGGCTGAAGGAAGTTGAATCAACAATGAT
ACCTGTCCCCCTTTGCGAATGGCCTAGCGAACCGAAAATGCGAGACATAG
GCAAAGCCAACCGCAAGATCACCCGACGCCTGCTCGCCGCAGTAGCACTC
TATCCATTGACCCAACGCCTGCATATGTCGCATGACGAGTTCCAGCAGCT
GATCGACCAAGCACAAAAAGAAGCGGAAAACCCAAGCTTGAAAACATATT
TCCCTTTGTACGTTGCTATCGGACGAAAGCCGACATAGATGACCGTTCAC
GGACGCGAATTCCAACAATATTCGATTGATAATGAGATATCATTCCAGCC
AGTTGATCGCGACGAAGCGAAGCGGCTCGAGCTCCAGAATCACGTCTTCA
ACATGATCTTTGATAATCGGCTGATCTTCCCGCGAGACTGTGAGCCTCAA
AGAGTTCTTGATTGCGGTCACGGCGCGGGGTCCTGGGCCATTCAGGTGGC
AGAAGATTTTCCAGAATGCGAGGTTATCGGTGTTGATATATCTCCTCATA
TGATACCAGATGACGAAGATGACGATTATGATGTGGCGGAAAACTTGGAG
TTTCAGGTCGACGACTTGAACCGCCCCTTTACCTTTCCCCCTGGATATTT
CGATCTCGTCAATTCGAGGATGATGGCAGCAGGTATCGACGGATCCCGAT
GGTCGTCATATATACAAGACATCAAAAGAGTTTTGAAACCAGGCGGTTGG
GTGCAGTTGGTTGAAATTTACTTCAACGTCCAGTCGGATAACGGTTCGCT
CACGGAGAATCACGCATTGAGACAGTGGAGTACAAAGCTCATGAGCTCAG
TCGAAGGCGTCAAGGATCTTCGTATAGGCACCCGCCTGAGAGATCTCCTG
TTAGCAGCAGGGCTGAAGGAAGTTGAATCAACAATGATACCTGTCCCCCT
TTGCGAATGGCCTAGCGAACCGAAAATGCGAGACATAGGCAAAGCCAACC
GCAAGATCACCCGACGCCTGCTCGCCGCAGTAGCACTCTATCCATTGACC
CAACGCCTGCATATGTCGCATGACGAGTTCCAGCAGCTGATCGACCAAGC
ACAAAAAGAAGCGGAAAACCCAAGCTTGAAAACATATTTCCCTTTGTACG
TTGCTATCGGACGAAAGCCGACATAGATGACCGTTCACGGACGCGAATTC
CAACAATATTCGATTGATAATGAGATATCATTCCAGCCAGTTGATCGCGA
CGAAGCGAAGCGGCTCGAGCTCCAGAATCACGTCTTCAACATGATCTTTG
ATAATCGGCTGATCTTCCCGCGAGACTGTGAGCCTCAAAGAGTTCTTGAT
TGCGGTCACGGCGCGGGGTCCTGGGCCATTCAGGTGGCAGAAGATTTTCC
AGAATGCGAGGTTATCGGTGTTGATATATCTCCTCATATGATACCAGATG
ACGAAGATGACGATTATGATGTGGCGGAAAACTTGGAGTTTCAGGTCGAC
GACTTGAACCGCCCCTTTACCTTTCCCCCTGGATATTTCGATCTCGTCAA
TTCGAGGATGATGGCAGCAGGTATCGACGGATCCCGATGGTCGTCATATA
TACAAGACATCAAAAGAGTTTTGAAACCAGGCGGTTGGGTGCAGTTGGTT
GAAATTTACTTCAACGTCCAGTCGGATAACGGTTCGCTCACGGAGAATCA
CGCATTGAGACAGTGGAGTACAAAGCTCATGAGCTCAGTCGAAGGCGTCA
AGGATCTTCGTATAGGCACCCGCCTGAGAGATCTCCTGTTAGCAGCAGGG
CTGAAGGAAGTTGAATCAACAATGATACCTGTCCCCCTTTGCGAATGGCC
TAGCGAACCGAAAATGCGAGACATAGGCAAAGCCAACCGCAAGATCACCC
GACGCCTGCTCGCCGCAGTAGCACTCTATCCATTGACCCAACGCCTGCAT
ATGTCGCATGACGAGTTCCAGCAGCTGATCGACCAAGCACAAAAAGAAGC
GGAAAACCCAAGCTTGAAAACATATTTCCCTTTGTACGTTGCTATCGGAC
GAAAGCCGACATAGATGACCGTTCACGGACGCGAATTCCAACAATATTCG
ATTGATAATGAGATATCATTCCAGCCAGTTGATCGCGACGAAGCGAAGCG
GCTCGAGCTCCAGAATCACGTCTTCAACATGATCTTTGATAATCGGCTGA
TCTTCCCGCGAGACTGTGAGCCTCAAAGAGTTCTTGATTGCGGTCACGGC
GCGGGGTCCTGGGCCATTCAGGTGGCAGAAGATTTTCCAGAATGCGAGGT
TATCGGTGTTGATATATCTCCTCATATGATACCAGATGACGAAGATGACG
ATTATGATGTGGCGGAAAACTTGGAGTTTCAGGTCGACGACTTGAACCGC
CCCTTTACCTTTCCCCCTGGATATTTCGATCTCGTCAATTCGAGGATGAT
GGCAGCAGGTATCGACGGATCCCGATGGTCGTCATATATACAAGACATCA
AAAGAGTTTTGAAACCAGGCGGTTGGGTGCAGTTGGTTGAAATTTACTTC
AACGTCCAGTCGGATAACGGTTCGCTCACGGAGAATCACGCATTGAGACA
GTGGAGTACAAAGCTCATGAGCTCAGTCGAAGGCGTCAAGGATCTTCGTA
TAGGCACCCGCCTGAGAGATCTCCTGTTAGCAGCAGGGCTGAAGGAAGTT
GAATCAACAATGATACCTGTCCCCCTTTGCGAATGGCCTAGCGAACCGAA
AATGCGAGACATAGGCAAAGCCAACCGCAAGATCACCCGACGCCTGCTCG
CCGCAGTAGCACTCTATCCATTGACCCAACGCCTGCATATGTCGCATGAC
GAGTTCCAGCAGCTGATCGACCAAGCACAAAAAGAAGCGGAAAACCCAAG
CTTGAAAACATATTTCCCTTTGTACGTTGCTATCGGACGAAAGCCGACAT
AGATGACCGTTCACGGACGCGAATTCCAACAATATTCGATTGATAATGAG
ATATCATTCCAGCCAGTTGATCGCGACGAAGCGAAGCGGCTCGAGCTCCA
GAATCACGTCTTCAACATGATCTTTGATAATCGGCTGATCTTCCCGCGAG
ACTGTGAGCCTCAAAGAGTTCTTGATTGCGGTCACGGCGCGGGGTCCTGG
GCCATTCAGGTGGCAGAAGATTTTCCAGAATGCGAGGTTATCGGTGTTGA
TATATCTCCTCATATGATACCAGATGACGAAGATGACGATTATGATGTGG
CGGAAAACTTGGAGTTTCAGGTCGACGACTTGAACCGCCCCTTTACCTTT
CCCCCTGGATATTTCGATCTCGTCAATTCGAGGATGATGGCAGCAGGTAT
CGACGGATCCCGATGGTCGTCATATATACAAGACATCAAAAGAGTTTTGA
AACCAGGCGGTTGGGTGCAGTTGGTTGAAATTTACTTCAACGTCCAGTCG
GATAACGGTTCGCTCACGGAGAATCACGCATTGAGACAGTGGAGTACAAA
GCTCATGAGCTCAGTCGAAGGCGTCAAGGATCTTCGTATAGGCACCCGCC
TGAGAGATCTCCTGTTAGCAGCAGGGCTGAAGGAAGTTGAATCAACAATG
ATACCTGTCCCCCTTTGCGAATGGCCTAGCGAACCGAAAATGCGAGACAT
AGGCAAAGCCAACCGCAAGATCACCCGACGCCTGCTCGCCGCAGTAGCAC
TCTATCCATTGACCCAACGCCTGCATATGTCGCATGACGAGTTCCAGCAG
CTGATCGACCAAGCACAAAAAGAAGCGGAAAACCCAAGCTTGAAAACATA
TTTCCCTTTGTACGTTGCTATCGGACGAAAGCCGACATAGATGACCGTTC
ACGGACGCGAATTCCAACAATATTCGATTGATAATGAGATATCATTCCAG
CCAGTTGATCGCGACGAAGCGAAGCGGCTCGAGCTCCAGAATCACGTCTT
CAACATGATCTTTGATAATCGGCTGATCTTCCCGCGAGACTGTGAGCCTC
AAAGAGTTCTTGATTGCGGTCACGGCGCGGGGTCCTGGGCCATTCAGGTG
GCAGAAGATTTTCCAGAATGCGAGGTTATCGGTGTTGATATATCTCCTCA
TATGATACCAGATGACGAAGATGACGATTATGATGTGGCGGAAAACTTGG
AGTTTCAGGTCGACGACTTGAACCGCCCCTTTACCTTTCCCCCTGGATAT
TTCGATCTCGTCAATTCGAGGATGATGGCAGCAGGTATCGACGGATCCCG
ATGGTCGTCATATATACAAGACATCAAAAGAGTTTTGAAACCAGGCGGTT
GGGTGCAGTTGGTTGAAATTTACTTCAACGTCCAGTCGGATAACGGTTCG
CTCACGGAGAATCACGCATTGAGACAGTGGAGTACAAAGCTCATGAGCTC
AGTCGAAGGCGTCAAGGATCTTCGTATAGGCACCCGCCTGAGAGATCTCC
TGTTAGCAGCAGGGCTGAAGGAAGTTGAATCAACAATGATACCTGTCCCC
CTTTGCGAATGGCCTAGCGAACCGAAAATGCGAGACATAGGCAAAGCCAA
CCGCAAGATCACCCGACGCCTGCTCGCCGCAGTAGCACTCTATCCATTGA
CCCAACGCCTGCATATGTCGCATGACGAGTTCCAGCAGCTGATCGACCAA
GCACAAAAAGAAGCGGAAAACCCAAGCTTGAAAACATATTTCCCTTTGTA
CGTTGCTATCGGACGAAAGCCGACATAGATGACCGTTCACGGACGCGAAT
TCCAACAATATTCGATTGATAATGAGATATCATTCCAGCCAGTTGATCGC
GACGAAGCGAAGCGGCTCGAGCTCCAGAATCACGTCTTCAACATGATCTT
TGATAATCGGCTGATCTTCCCGCGAGACTGTGAGCCTCAAAGAGTTCTTG
ATTGCGGTCACGGCGCGGGGTCCTGGGCCATTCAGGTGGCAGAAGATTTT
CCAGAATGCGAGGTTATCGGTGTTGATATATCTCCTCATATGATACCAGA
TGACGAAGATGACGATTATGATGTGGCGGAAAACTTGGAGTTTCAGGTCG
ACGACTTGAACCGCCCCTTTACCTTTCCCCCTGGATATTTCGATCTCGTC
AATTCGAGGATGATGGCAGCAGGTATCGACGGATCCCGATGGTCGTCATA
TATACAAGACATCAAAAGAGTTTTGAAACCAGGCGGTTGGGTGCAGTTGG
TTGAAATTTACTTCAACGTCCAGTCGGATAACGGTTCGCTCACGGAGAAT
CACGCATTGAGACAGTGGAGTACAAAGCTCATGAGCTCAGTCGAAGGCGT
CAAGGATCTTCGTATAGGCACCCGCCTGAGAGATCTCCTGTTAGCAGCAG
GGCTGAAGGAAGTTGAATCAACAATGATACCTGTCCCCCTTTGCGAATGG
CCTAGCGAACCGAAAATGCGAGACATAGGCAAAGCCAACCGCAAGATCAC
CCGACGCCTGCTCGCCGCAGTAGCACTCTATCCATTGACCCAACGCCTGC
ATATGTCGCATGACGAGTTCCAGCAGCTGATCGACCAAGCACAAAAAGAA
GCGGAAAACCCAAGCTTGAAAACATATTTCCCTTTGTACGTTGCTATCGG
ACGAAAGCCGACATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006342KJC3_006342Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006342-T1KJC3_006342-T1-proteinAspergillus niger KJC3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006342-T1.exon1KJC3_006342-T1.exon1Aspergillus niger KJC3exon
KJC3_006342-T1.exon2KJC3_006342-T1.exon2Aspergillus niger KJC3exon
KJC3_006342-T1.exon3KJC3_006342-T1.exon3Aspergillus niger KJC3exon
KJC3_006342-T1.exon4KJC3_006342-T1.exon4Aspergillus niger KJC3exon
KJC3_006342-T1.exon5KJC3_006342-T1.exon5Aspergillus niger KJC3exon
KJC3_006342-T1.exon6KJC3_006342-T1.exon6Aspergillus niger KJC3exon
KJC3_006342-T1.exon7KJC3_006342-T1.exon7Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006342-T1.cdsKJC3_006342-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR041698
DBxrefPFAM:PF01209
DBxrefPFAM:PF13847
DBxrefPFAM:PF13649
DBxrefPFAM:PF13489
DBxrefPFAM:PF08242
DBxrefPFAM:PF08241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5400110..5401431 +
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