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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5413008..5413809+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006347-T1 ID=KJC3_006347-T1|Name=KJC3_006347-T1|organism=Aspergillus niger KJC3|type=mRNA|length=802bp|location=Sequence derived from alignment at ch4:5413008..5413809+ (Aspergillus niger KJC3)
ATCCTCTCTTGCCTCGTCTCTTATCTGTACCTCTGGTGATTCTTCGTCCG
TCAATACTTTCTCGAATATACTTCATATTAGCTTAGCTAGTCCTTCGCTA
TTACTTGATTCTTATACGCAACGAAAGCTGCTGCTTTGTGTCCTCTTTGC
GACCATGAAGCTCTTATCAACCGCCGCTACATTCCTCCTTTGCGTCGCCC
CCTTCTCTACCGCCCGGTCTTTGGACTTCTTCAACTCTCAAACCCCCATC
AAAGCAGAGAATGAGGCTGTGAAGGGCGATAACCCTCTGGTGTACTGCAA
TAATCCTTCAAACTATATTCTGCAAATAGAGCGTGTGGACCTCACGCCTA
ACCCTCCTCTGCCGTACGCTTCAATTAGCCTGCCTTCCCCGAACCGGATC
GCATACTGATCGCTCTATAGTGGAAAGACACTCACCATCCAAGCTACGGG
TACTTTGAATGAGAAGATTGAACAGGGGGCTTATGTGAATTTGGAAGTCA
AATATGGCCTGATTACTCTGGTCAGGCAGACGGCCGACCTGTGTGAGCAG
ATCGTCAATGTTGACCTCGAATGTCCTCTGGAGAAGGGCGAGATGACCTT
GACTAAACAAGTTGAGCTGCCCAGACAGATCCCTCCGGTATGTGATTCCC
TATGCTATACCGCTATCGATATCGAGATTAACCAGGTCATGATCAATCAA
CAGGGCAAGTACACTGTGCATGCCGACGTTTACACCAAAGACGATAAGCA
TGTTACCTGCCTTGAGGCGCATAACATCGAGTTCAAGGCGGGCTTTATCT
GA back to topCoding sequence (CDS) from alignment at ch4:5413008..5413809+ >KJC3_006347-T1 ID=KJC3_006347-T1|Name=KJC3_006347-T1|organism=Aspergillus niger KJC3|type=CDS|length=1575bp|location=Sequence derived from alignment at ch4:5413008..5413809+ (Aspergillus niger KJC3)
ATGAAGCTCTTATCAACCGCCGCTACATTCCTCCTTTGCGTCGCCCCCTT
CTCTACCGCCCGGTCTTTGGACTTCTTCAACTCTCAAACCCCCATCAAAG
CAGAGAATGAGGCTGTGAAGGGCGATAACCCTCTGGTGTACTGCAATAAT
CCTTCAAACTATATTCTGCAAATAGAGCGTGTGGACCTCACGCCTAACCC
TCCTCTGCCTGGAAAGACACTCACCATCCAAGCTACGGGTACTTTGAATG
AGAAGATTGAACAGGGGGCTTATGTGAATTTGGAAGTCAAATATGGCCTG
ATTACTCTGGTCAGGCAGACGGCCGACCTGTGTGAGCAGATCGTCAATGT
TGACCTCGAATGTCCTCTGGAGAAGGGCGAGATGACCTTGACTAAACAAG
TTGAGCTGCCCAGACAGATCCCTCCGGGCAAGTACACTGTGCATGCCGAC
GTTTACACCAAAGACGATAAGCATGTTACCTGCCTTGAGGCGCATAACAT
CGAGTTCAAGGCGGGCTTTATCTGAATGAAGCTCTTATCAACCGCCGCTA
CATTCCTCCTTTGCGTCGCCCCCTTCTCTACCGCCCGGTCTTTGGACTTC
TTCAACTCTCAAACCCCCATCAAAGCAGAGAATGAGGCTGTGAAGGGCGA
TAACCCTCTGGTGTACTGCAATAATCCTTCAAACTATATTCTGCAAATAG
AGCGTGTGGACCTCACGCCTAACCCTCCTCTGCCTGGAAAGACACTCACC
ATCCAAGCTACGGGTACTTTGAATGAGAAGATTGAACAGGGGGCTTATGT
GAATTTGGAAGTCAAATATGGCCTGATTACTCTGGTCAGGCAGACGGCCG
ACCTGTGTGAGCAGATCGTCAATGTTGACCTCGAATGTCCTCTGGAGAAG
GGCGAGATGACCTTGACTAAACAAGTTGAGCTGCCCAGACAGATCCCTCC
GGGCAAGTACACTGTGCATGCCGACGTTTACACCAAAGACGATAAGCATG
TTACCTGCCTTGAGGCGCATAACATCGAGTTCAAGGCGGGCTTTATCTGA
ATGAAGCTCTTATCAACCGCCGCTACATTCCTCCTTTGCGTCGCCCCCTT
CTCTACCGCCCGGTCTTTGGACTTCTTCAACTCTCAAACCCCCATCAAAG
CAGAGAATGAGGCTGTGAAGGGCGATAACCCTCTGGTGTACTGCAATAAT
CCTTCAAACTATATTCTGCAAATAGAGCGTGTGGACCTCACGCCTAACCC
TCCTCTGCCTGGAAAGACACTCACCATCCAAGCTACGGGTACTTTGAATG
AGAAGATTGAACAGGGGGCTTATGTGAATTTGGAAGTCAAATATGGCCTG
ATTACTCTGGTCAGGCAGACGGCCGACCTGTGTGAGCAGATCGTCAATGT
TGACCTCGAATGTCCTCTGGAGAAGGGCGAGATGACCTTGACTAAACAAG
TTGAGCTGCCCAGACAGATCCCTCCGGGCAAGTACACTGTGCATGCCGAC
GTTTACACCAAAGACGATAAGCATGTTACCTGCCTTGAGGCGCATAACAT
CGAGTTCAAGGCGGGCTTTATCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0032366 | intracellular sterol transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006347-T1.utr5p1 | KJC3_006347-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| Note | BUSCO:EOG09264UJF |
| DBxref | InterPro:IPR014756 |
| DBxref | InterPro:IPR033917 |
| DBxref | InterPro:IPR003172 |
| DBxref | PFAM:PF02221 |
| Product | Phosphatidylglycerol/phosphatidylinositol transfer protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5413008..5413809 + |
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