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KJC3_006348-T1, KJC3_006348-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006348-T1
Unique NameKJC3_006348-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5414109..5415242-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006348-T1 ID=KJC3_006348-T1|Name=KJC3_006348-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1134bp|location=Sequence derived from alignment at ch4:5414109..5415242- (Aspergillus niger KJC3)
CAGGGACATATTTACCTTCGTATATCGGCTCAGGGCAACGCGAGCTAATT
CCAGCCGCTGAACTTCGCCAGTATATAAGCAGTTTACAGTCTTTACGCCC
GCTTCTTCCCTGTTTCCTGAACCATGGCGGCTCCGGCCGTATCATACAAG
GTAATATCCCGAGGTTTCCCCTCCTCATTGACAGCAGTCACTAACCATAT
ACACCACATCTAGGACCGGCAGTTCCTTGCGGTCATAGGAGATGAAGAGT
GAGCCACACCACTACTACCTGATGAGAGAGGCACTTCCGCTGACTGTTTA
TTTCCAGCTCCGTAACAGGCCTCCTCCTTGCCGGTGTCGGTGTACGTATC
CTCAAAGCACAACAGCCAGATAACGACAAACATGCGACCACAACTAACAT
GATACATTGAAGCATGTCACGGATGGCGCAGATGCCCAGCGAAACTTCCT
TGTGGTAGACTCGAAGACTGAGACTGCCACGATCGAGAAAGCGTTCCAGA
ACTTCACTCAGGAGAGGAAAGATATCGCCATTGTCCTTATCAACCAGCAT
GTATGTGTCTTGTTACAACTTCGCAGTGTCCCTAACCTGCGACGCCTGCG
TATTATACAATTATTTGAGTGCTTTCATACGGCCGCTTACAATTGGATAT
AGATTGCAGAGCGTATCCGGCACAGCGTCGATTCCTACGCCGAGGCTTTC
CCTGCCGTTCTCGAGATCCCGAGCAAGGACCACCCATATGACCCTGAAAA
GGATAGTGTACTCAAGCGGGTGCGACGGCTGTTTGGAGAGTAGAGATAGC
GCGCTGTTCATTTCGATTTGAGGTTTCATATGTATTACCATCTGGTGGTG
TTAACTCATTGCACAGTCTCTTGTTTGCCGTTTCGCGGAAGTATACACAT
GGAATGAGAGTTAGCTCGAAGGCGGAGGGGAAGATACCCAATCATATCAC
TTATGCATGATAACACCAAGTTCACAGCAGCCATTCTGGGTTGTTGTTCG
ATACGCTGGTCACTAAGCCTGGCTACCTGTACGTTTCATTAGACTATGCT
GTCAATGAGATCAATGTTTCGAATGCATTTTAGTACAGATGCTGATTAAT
GCCAGTGAAAGGAGGCCACGAGTTATAAGAACAA
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Coding sequence (CDS) from alignment at ch4:5414109..5415242-

>KJC3_006348-T1 ID=KJC3_006348-T1|Name=KJC3_006348-T1|organism=Aspergillus niger KJC3|type=CDS|length=1875bp|location=Sequence derived from alignment at ch4:5414109..5415242- (Aspergillus niger KJC3)
ATTGCAGAGCGTATCCGGCACAGCGTCGATTCCTACGCCGAGGCTTTCCC
TGCCGTTCTCGAGATCCCGAGCAAGGACCACCCATATGACCCTGAAAAGG
ATAGTGTACTCAAGCGGGTGCGACGGCTGTTTGGAGAGTAGCATGTCACG
GATGGCGCAGATGCCCAGCGAAACTTCCTTGTGGTAGACTCGAAGACTGA
GACTGCCACGATCGAGAAAGCGTTCCAGAACTTCACTCAGGAGAGGAAAG
ATATCGCCATTGTCCTTATCAACCAGCATCTCCGTAACAGGCCTCCTCCT
TGCCGGTGTCGGTGACCGGCAGTTCCTTGCGGTCATAGGAGATGAAGAAT
GGCGGCTCCGGCCGTATCATACAAGATTGCAGAGCGTATCCGGCACAGCG
TCGATTCCTACGCCGAGGCTTTCCCTGCCGTTCTCGAGATCCCGAGCAAG
GACCACCCATATGACCCTGAAAAGGATAGTGTACTCAAGCGGGTGCGACG
GCTGTTTGGAGAGTAGCATGTCACGGATGGCGCAGATGCCCAGCGAAACT
TCCTTGTGGTAGACTCGAAGACTGAGACTGCCACGATCGAGAAAGCGTTC
CAGAACTTCACTCAGGAGAGGAAAGATATCGCCATTGTCCTTATCAACCA
GCATCTCCGTAACAGGCCTCCTCCTTGCCGGTGTCGGTGACCGGCAGTTC
CTTGCGGTCATAGGAGATGAAGAATGGCGGCTCCGGCCGTATCATACAAG
ATTGCAGAGCGTATCCGGCACAGCGTCGATTCCTACGCCGAGGCTTTCCC
TGCCGTTCTCGAGATCCCGAGCAAGGACCACCCATATGACCCTGAAAAGG
ATAGTGTACTCAAGCGGGTGCGACGGCTGTTTGGAGAGTAGCATGTCACG
GATGGCGCAGATGCCCAGCGAAACTTCCTTGTGGTAGACTCGAAGACTGA
GACTGCCACGATCGAGAAAGCGTTCCAGAACTTCACTCAGGAGAGGAAAG
ATATCGCCATTGTCCTTATCAACCAGCATCTCCGTAACAGGCCTCCTCCT
TGCCGGTGTCGGTGACCGGCAGTTCCTTGCGGTCATAGGAGATGAAGAAT
GGCGGCTCCGGCCGTATCATACAAGATTGCAGAGCGTATCCGGCACAGCG
TCGATTCCTACGCCGAGGCTTTCCCTGCCGTTCTCGAGATCCCGAGCAAG
GACCACCCATATGACCCTGAAAAGGATAGTGTACTCAAGCGGGTGCGACG
GCTGTTTGGAGAGTAGCATGTCACGGATGGCGCAGATGCCCAGCGAAACT
TCCTTGTGGTAGACTCGAAGACTGAGACTGCCACGATCGAGAAAGCGTTC
CAGAACTTCACTCAGGAGAGGAAAGATATCGCCATTGTCCTTATCAACCA
GCATCTCCGTAACAGGCCTCCTCCTTGCCGGTGTCGGTGACCGGCAGTTC
CTTGCGGTCATAGGAGATGAAGAATGGCGGCTCCGGCCGTATCATACAAG
ATTGCAGAGCGTATCCGGCACAGCGTCGATTCCTACGCCGAGGCTTTCCC
TGCCGTTCTCGAGATCCCGAGCAAGGACCACCCATATGACCCTGAAAAGG
ATAGTGTACTCAAGCGGGTGCGACGGCTGTTTGGAGAGTAGCATGTCACG
GATGGCGCAGATGCCCAGCGAAACTTCCTTGTGGTAGACTCGAAGACTGA
GACTGCCACGATCGAGAAAGCGTTCCAGAACTTCACTCAGGAGAGGAAAG
ATATCGCCATTGTCCTTATCAACCAGCATCTCCGTAACAGGCCTCCTCCT
TGCCGGTGTCGGTGACCGGCAGTTCCTTGCGGTCATAGGAGATGAAGAAT
GGCGGCTCCGGCCGTATCATACAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033180proton-transporting V-type ATPase, V1 domain
Vocabulary: Biological Process
TermDefinition
GO:0034220ion transmembrane transport
GO:1902600proton transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0046961proton-transporting ATPase activity, rotational mechanism
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VMA7KJC3_006348Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006348-T1KJC3_006348-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006348-T1.cdsKJC3_006348-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006348-T1.utr3p2KJC3_006348-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_006348-T1.utr3p1KJC3_006348-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006348-T1.exon6KJC3_006348-T1.exon6Aspergillus niger KJC3exon
KJC3_006348-T1.exon5KJC3_006348-T1.exon5Aspergillus niger KJC3exon
KJC3_006348-T1.exon4KJC3_006348-T1.exon4Aspergillus niger KJC3exon
KJC3_006348-T1.exon3KJC3_006348-T1.exon3Aspergillus niger KJC3exon
KJC3_006348-T1.exon2KJC3_006348-T1.exon2Aspergillus niger KJC3exon
KJC3_006348-T1.exon1KJC3_006348-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006348-T1.utr5p1KJC3_006348-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265FI4
DBxrefInterPro:IPR008218
DBxrefInterPro:IPR036906
DBxrefInterPro:IPR005772
DBxrefPFAM:PF01990
ProductH( )-transporting V1 sector ATPase subunit F
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5414109..5415242 -
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