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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5415488..5416901+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006349-T1 ID=KJC3_006349-T1|Name=KJC3_006349-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1414bp|location=Sequence derived from alignment at ch4:5415488..5416901+ (Aspergillus niger KJC3)
ATGCCCCGGCTTGTCCGTCGCCGACCATTGACGGAGCGCATCAAGTCCTA
CTTGAATCCTCTGGACTTTCTCTTGTGGCTGTCGGAGGAGATCGATACTC
ATGACTGGGACCAGTTTGAGAAGAACTGGGCGCTCCCCCTGGGGATAGCT
CTGAATGTTGTCTTTTTGATCGCCAGGGCCAATAGTCAATCATACAGCAG
TCAAGCCATAGATGATGTCTTTGGCGATGATGGAAGCACTCCATGGCTCA
GTTGGTTTGTATGTGACGCCGAATCGACTTTGACTTTGCCTTGAATATAC
GCTCCATGTGCTGCATTGCTAACGCAACGGGTGATAGTCTTCCTTCATCG
TCCACCTCCTCACCACCTTTACCGCGTTCAACGCCTTCTATACATTTTAC
CGGAAGCGACACTATCGCATGTTTGAAGCATCGATCGATCAGGCTCCTGC
AACTCCCTCCGCTCATCGAGTCCGCGTTAATTCGACTCCTGTAACCGCTT
CGCCACTGAAATATCTGGCGGATACGATAGCCAGATCAGCCCAGTCGAGA
GCCCACCCAGACGCACAGCGAGATGTATGGGAACTTGCCGTCTGGGACCC
TCTACCTATTTGCATTCGATTGTTCTGCCTCTTCAGTCCTGGACATGTCT
TAGTATACTGGGTTTTCCTGCCCACCCAGCTATCCGATCCCCGACCAAGT
GTGACTATTGTGACCACCATCTTCATAGCGGCACTCCTCTCGGTACAGAT
GACGTTCCTTTCCTCGTCCTATACCCAGCAAGCGAAGGATTCAATGGTGG
TTCATAAGGAGGTGCTTCGTGAATACGACACCAAATACGTTCACCCTCGT
ACCCAGCCTCTGATGAGAGACGTGGCCACTCAGTTCTCCGAGTCCGATCC
CGATGTTAAGCAGAATAAGGTTGATACCTTCACGCCCACTGTCGTACTTC
ATAGAGGCTTCAAGACGAGCCCAAATCCCAATTACGTCAGCCATGTGGAC
CCCGAGGGCCGCTCTTCCGTGCGCCAGTCCTTTGCAGCGACACCTACTGG
AGTGTCTCATCGTGCAGCCGCGTTGCAGACCCCGAGCCATCTGCGAGATG
CTTCCCCTATTGTGCGAAGCTCGATCTCTGCAATTCGCCAGCCTCAGTTC
CGGCAGACACCGACGACTACAGGTGATGGTGGAAGCCTTGGCATTTACTC
GCATGCCAACTCGCCTCTGAAGAAGTCTACACCAGCCAATCTTGAACGTC
GTCTTCAGAGCAATGGTGACTTCTTTTACAAAGAACGGGGAACAAGTGCG
ATGAGAAGGCCATCTAGTCCCCTCAAAAGAAGTAATGTCCCCGCAGGCAG
TCCCTTAACTCCGGGACCGAGGCGGAGTCAAGTGGACGCACGCCGCGACA
GTGGACGGTTTTAG back to topCoding sequence (CDS) from alignment at ch4:5415488..5416901+ >KJC3_006349-T1 ID=KJC3_006349-T1|Name=KJC3_006349-T1|organism=Aspergillus niger KJC3|type=CDS|length=2670bp|location=Sequence derived from alignment at ch4:5415488..5416901+ (Aspergillus niger KJC3)
ATGCCCCGGCTTGTCCGTCGCCGACCATTGACGGAGCGCATCAAGTCCTA
CTTGAATCCTCTGGACTTTCTCTTGTGGCTGTCGGAGGAGATCGATACTC
ATGACTGGGACCAGTTTGAGAAGAACTGGGCGCTCCCCCTGGGGATAGCT
CTGAATGTTGTCTTTTTGATCGCCAGGGCCAATAGTCAATCATACAGCAG
TCAAGCCATAGATGATGTCTTTGGCGATGATGGAAGCACTCCATGGCTCA
GTTGGTTTTCTTCCTTCATCGTCCACCTCCTCACCACCTTTACCGCGTTC
AACGCCTTCTATACATTTTACCGGAAGCGACACTATCGCATGTTTGAAGC
ATCGATCGATCAGGCTCCTGCAACTCCCTCCGCTCATCGAGTCCGCGTTA
ATTCGACTCCTGTAACCGCTTCGCCACTGAAATATCTGGCGGATACGATA
GCCAGATCAGCCCAGTCGAGAGCCCACCCAGACGCACAGCGAGATGTATG
GGAACTTGCCGTCTGGGACCCTCTACCTATTTGCATTCGATTGTTCTGCC
TCTTCAGTCCTGGACATGTCTTAGTATACTGGGTTTTCCTGCCCACCCAG
CTATCCGATCCCCGACCAAGTGTGACTATTGTGACCACCATCTTCATAGC
GGCACTCCTCTCGGTACAGATGACGTTCCTTTCCTCGTCCTATACCCAGC
AAGCGAAGGATTCAATGGTGGTTCATAAGGAGGTGCTTCGTGAATACGAC
ACCAAATACGTTCACCCTCGTACCCAGCCTCTGATGAGAGACGTGGCCAC
TCAGTTCTCCGAGTCCGATCCCGATGTTAAGCAGAATAAGGTTGATACCT
TCACGCCCACTGTCGTACTTCATAGAGGCTTCAAGACGAGCCCAAATCCC
AATTACGTCAGCCATGTGGACCCCGAGGGCCGCTCTTCCGTGCGCCAGTC
CTTTGCAGCGACACCTACTGGAGTGTCTCATCGTGCAGCCGCGTTGCAGA
CCCCGAGCCATCTGCGAGATGCTTCCCCTATTGTGCGAAGCTCGATCTCT
GCAATTCGCCAGCCTCAGTTCCGGCAGACACCGACGACTACAGGTGATGG
TGGAAGCCTTGGCATTTACTCGCATGCCAACTCGCCTCTGAAGAAGTCTA
CACCAGCCAATCTTGAACGTCGTCTTCAGAGCAATGGTGACTTCTTTTAC
AAAGAACGGGGAACAAGTGCGATGAGAAGGCCATCTAGTCCCCTCAAAAG
AAGTAATGTCCCCGCAGGCAGTCCCTTAACTCCGGGACCGAGGCGGAGTC
AAGTGGACGCACGCCGCGACAGTGGACGGTTTTAGATGCCCCGGCTTGTC
CGTCGCCGACCATTGACGGAGCGCATCAAGTCCTACTTGAATCCTCTGGA
CTTTCTCTTGTGGCTGTCGGAGGAGATCGATACTCATGACTGGGACCAGT
TTGAGAAGAACTGGGCGCTCCCCCTGGGGATAGCTCTGAATGTTGTCTTT
TTGATCGCCAGGGCCAATAGTCAATCATACAGCAGTCAAGCCATAGATGA
TGTCTTTGGCGATGATGGAAGCACTCCATGGCTCAGTTGGTTTTCTTCCT
TCATCGTCCACCTCCTCACCACCTTTACCGCGTTCAACGCCTTCTATACA
TTTTACCGGAAGCGACACTATCGCATGTTTGAAGCATCGATCGATCAGGC
TCCTGCAACTCCCTCCGCTCATCGAGTCCGCGTTAATTCGACTCCTGTAA
CCGCTTCGCCACTGAAATATCTGGCGGATACGATAGCCAGATCAGCCCAG
TCGAGAGCCCACCCAGACGCACAGCGAGATGTATGGGAACTTGCCGTCTG
GGACCCTCTACCTATTTGCATTCGATTGTTCTGCCTCTTCAGTCCTGGAC
ATGTCTTAGTATACTGGGTTTTCCTGCCCACCCAGCTATCCGATCCCCGA
CCAAGTGTGACTATTGTGACCACCATCTTCATAGCGGCACTCCTCTCGGT
ACAGATGACGTTCCTTTCCTCGTCCTATACCCAGCAAGCGAAGGATTCAA
TGGTGGTTCATAAGGAGGTGCTTCGTGAATACGACACCAAATACGTTCAC
CCTCGTACCCAGCCTCTGATGAGAGACGTGGCCACTCAGTTCTCCGAGTC
CGATCCCGATGTTAAGCAGAATAAGGTTGATACCTTCACGCCCACTGTCG
TACTTCATAGAGGCTTCAAGACGAGCCCAAATCCCAATTACGTCAGCCAT
GTGGACCCCGAGGGCCGCTCTTCCGTGCGCCAGTCCTTTGCAGCGACACC
TACTGGAGTGTCTCATCGTGCAGCCGCGTTGCAGACCCCGAGCCATCTGC
GAGATGCTTCCCCTATTGTGCGAAGCTCGATCTCTGCAATTCGCCAGCCT
CAGTTCCGGCAGACACCGACGACTACAGGTGATGGTGGAAGCCTTGGCAT
TTACTCGCATGCCAACTCGCCTCTGAAGAAGTCTACACCAGCCAATCTTG
AACGTCGTCTTCAGAGCAATGGTGACTTCTTTTACAAAGAACGGGGAACA
AGTGCGATGAGAAGGCCATCTAGTCCCCTCAAAAGAAGTAATGTCCCCGC
AGGCAGTCCCTTAACTCCGGGACCGAGGCGGAGTCAAGTGGACGCACGCC
GCGACAGTGGACGGTTTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018819 |
| DBxref | PFAM:PF10332 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5415488..5416901 + |
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