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KJC3_006356-T1, KJC3_006356-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006356-T1
Unique NameKJC3_006356-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5449650..5451419+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006356-T1 ID=KJC3_006356-T1|Name=KJC3_006356-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1770bp|location=Sequence derived from alignment at ch4:5449650..5451419+ (Aspergillus niger KJC3)
CATGGATTTCTGGCCTATCTGCCGTATAGTGTCGCAGTGCCTATCTGGTG
TAAGATGACTTCTTGCTGCACGAAGCTTCCCCAGCCAACCTTCCGTTCCT
TGTCGTTTGTCGGAAGAGGAAGGAGGTGCCCTCTCCTCCAATCCGGCAAT
CACGCCTGCTGCCTCGTCTTTTTCGGGAGAAACACCAGGACACTCGTAGG
CTTCCTCGACATCCTCTACTTATCCTTCTATCCCTAACCACGTATCATGG
CTCTTATTCCCACCTTTGGAACCGGCCTCTTCATTGGGGCCGGCCAAGCT
CTGGCTGCCGGTGGTCCAGCATCATTACTTGGTTCATATGTACTGGTATT
TTTCTTATCTTACTGCTTGACAACAGCCATTGCAGAGATTGCAGCCCACC
GACCTGCACTCAACGGTACCATGGTGGCTCACAGCTATGAATATGGCTCC
AACCATCTGGGGTTTTCTTTAGGCTACCTCAGATGGTACTCCCTGGCAAT
GATGGTTCCCTTCGAGATCACCACTGCCATGGTCAATCTCAGTTTGTGGA
CTCCTGAGCCCAGCATGGCGATCCGAATTGCAATGGTCGCGGTCCTGATC
CTTCTATTCAATATGCTCCCCCAGCGGGCTTTCCAGAGAACTGAAACTAT
TTTCACGGGTCTGAAGATCGTCACTACTGCGGGCCTGACAATTTGCTCGC
TGTTCCTAGCAATTCGAGGTATCCCAGGAACACCAATACGAGGATTTCGT
TACTGGCACGAACCTGGACCCATGAACGAGTATCTCATCCCCGGCGGTGG
GGGGCGGTGCCTTGGATTCCTACAATGCTTTCTATACAGCGTGATCTCTT
TCACCTTCACTCCCGAAATAACTGTTCAGAGGGCTGAGCGTTCCAACACG
GAAGGAGGTCCTAGCATCCTGAGCATGGCCCGAACGGACAGTGGCTATCT
TTTTGCCCTCTACATTCTAAGCGCGTTCATGATGACCTTTGTTAGTCCAT
TTGATGAGCCTCGACTGACCAATTATGGCACGGGCGCCGGCACATCGCCC
TTCGTCGTGGGCTTCGTTCGCGCGGGCATCCCGGCGTTACGGATCCTGGT
GACCGTGTTGATATTCCTTTCATCGGTCGCCTCTGGGCGCTCTTTCCTCT
ACATATCCTCTCGCACACTCTACACCTTGGCCGAATCTGGACATGCTCCA
GCAATGCTTACGAGATGCAACCGATATGACGTGCCCTATGTGGCCATACT
GACATCTGCGCAATTCTCAATGTTTGCTTTCCTGTCGCTGGCAGAGTCCA
GCTCGGCCCTTTTCAATTCACTTATGTACTTTATTACTACGTCCGGCTCC
ATCTCATGGCTCTGCTCGAGTATCATCTACCTTCGATTTCGGAGGAAGAC
CGAGGAACAGGGCTTTATTCGAGTCCACCAGTCCCGCGTCCAGCCCTACG
GGGTATATGTTGGGATCCTAGGCTGCACCCTGCTGCCAATTGCCAATGCT
CTCGTTCTTGCGTTTCCCCCACCATCATCCGAGGAACTCCCGGTTCAGTC
CTGGTCACAACTGCGAATGAGAAACGCTATTCCTGTATACCTTGGGGTCT
TGTCATTCCTCTCGCTCTATTTCGGTCACCAAGCGAGAACTGCCATTATA
CAACGGAGACTGAAGTCGGAGGATGAGCTGACCAGTCGTCGAAGATGGTG
GAGAATAATCTGGCCGAAGCGCATTGAACCGTCATCCAGTGCCCCCGTCT
CGAGTCCCCCGGAGCCGTGA
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Coding sequence (CDS) from alignment at ch4:5449650..5451419+

>KJC3_006356-T1 ID=KJC3_006356-T1|Name=KJC3_006356-T1|organism=Aspergillus niger KJC3|type=CDS|length=1524bp|location=Sequence derived from alignment at ch4:5449650..5451419+ (Aspergillus niger KJC3)
ATGGCTCTTATTCCCACCTTTGGAACCGGCCTCTTCATTGGGGCCGGCCA
AGCTCTGGCTGCCGGTGGTCCAGCATCATTACTTGGTTCATATGTACTGG
TATTTTTCTTATCTTACTGCTTGACAACAGCCATTGCAGAGATTGCAGCC
CACCGACCTGCACTCAACGGTACCATGGTGGCTCACAGCTATGAATATGG
CTCCAACCATCTGGGGTTTTCTTTAGGCTACCTCAGATGGTACTCCCTGG
CAATGATGGTTCCCTTCGAGATCACCACTGCCATGGTCAATCTCAGTTTG
TGGACTCCTGAGCCCAGCATGGCGATCCGAATTGCAATGGTCGCGGTCCT
GATCCTTCTATTCAATATGCTCCCCCAGCGGGCTTTCCAGAGAACTGAAA
CTATTTTCACGGGTCTGAAGATCGTCACTACTGCGGGCCTGACAATTTGC
TCGCTGTTCCTAGCAATTCGAGGTATCCCAGGAACACCAATACGAGGATT
TCGTTACTGGCACGAACCTGGACCCATGAACGAGTATCTCATCCCCGGCG
GTGGGGGGCGGTGCCTTGGATTCCTACAATGCTTTCTATACAGCGTGATC
TCTTTCACCTTCACTCCCGAAATAACTGTTCAGAGGGCTGAGCGTTCCAA
CACGGAAGGAGGTCCTAGCATCCTGAGCATGGCCCGAACGGACAGTGGCT
ATCTTTTTGCCCTCTACATTCTAAGCGCGTTCATGATGACCTTTGTTAGT
CCATTTGATGAGCCTCGACTGACCAATTATGGCACGGGCGCCGGCACATC
GCCCTTCGTCGTGGGCTTCGTTCGCGCGGGCATCCCGGCGTTACGGATCC
TGGTGACCGTGTTGATATTCCTTTCATCGGTCGCCTCTGGGCGCTCTTTC
CTCTACATATCCTCTCGCACACTCTACACCTTGGCCGAATCTGGACATGC
TCCAGCAATGCTTACGAGATGCAACCGATATGACGTGCCCTATGTGGCCA
TACTGACATCTGCGCAATTCTCAATGTTTGCTTTCCTGTCGCTGGCAGAG
TCCAGCTCGGCCCTTTTCAATTCACTTATGTACTTTATTACTACGTCCGG
CTCCATCTCATGGCTCTGCTCGAGTATCATCTACCTTCGATTTCGGAGGA
AGACCGAGGAACAGGGCTTTATTCGAGTCCACCAGTCCCGCGTCCAGCCC
TACGGGGTATATGTTGGGATCCTAGGCTGCACCCTGCTGCCAATTGCCAA
TGCTCTCGTTCTTGCGTTTCCCCCACCATCATCCGAGGAACTCCCGGTTC
AGTCCTGGTCACAACTGCGAATGAGAAACGCTATTCCTGTATACCTTGGG
GTCTTGTCATTCCTCTCGCTCTATTTCGGTCACCAAGCGAGAACTGCCAT
TATACAACGGAGACTGAAGTCGGAGGATGAGCTGACCAGTCGTCGAAGAT
GGTGGAGAATAATCTGGCCGAAGCGCATTGAACCGTCATCCAGTGCCCCC
GTCTCGAGTCCCCCGGAGCCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006356KJC3_006356Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006356-T1.utr5p1KJC3_006356-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006356-T1.exon1KJC3_006356-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006356-T1.cdsKJC3_006356-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006356-T1KJC3_006356-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR004841
DBxrefPFAM:PF13520
DBxrefPFAM:PF00324
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5449650..5451419 +
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