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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5452387..5457994+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006357-T1 ID=KJC3_006357-T1|Name=KJC3_006357-T1|organism=Aspergillus niger KJC3|type=mRNA|length=5608bp|location=Sequence derived from alignment at ch4:5452387..5457994+ (Aspergillus niger KJC3)
CTCCCCCCTTTACCCTTCCTATCGAAAGCAGGGCCGAAATCATGTTATCT
GAGCACGCCTATCATCATATTTCGTCCTTATGACCCCGATCTGCTCCCCC
TCCGTCAATTATTGTTCTTCCTTCCCTGGCAGTCAGGCCCTCGTCCGCTG
CCTCTGACAACCACAACCCCCCCCCCCCCCCCCCCCCTCTCTCTCCCTCT
GCCTCTCTCCCTTCAGCGTAATGCTCAATACCTGATTACCACCCATCTTG
CCCCCTCCCCACTGGACGGGTAAATGGGGTAATTTTTCATGAGGCTAGCA
AGCCATGGAGGATCCCCAACTAAACTAACCAGCATCTTTCGGGGTTTTTT
TGATTTTGATTCTGGATTCGGATTTCAATTTTCCTTTCCAAAATCATCAG
TCCTGCTCACAGACCATTCCCTTCTCTTTTTCCCCTTCCAGCCCTTTCTC
CCCTTTTCCCATTAACCTGCCGGAACAACCCTTCACGGTGGACGATACCT
CATAAATCTCTGGGGGACCCCGGTGACTCTGTCACATAACTAACTCTCTC
TCATTGCTTTCTCCTCACCTTTCTCTCCCAGCCCACCAGATCCTCCGGGT
ACGATATCCTCGGATATTGCATGCACCGGGGCCTCGTGACGGTGACTTGG
GCTTGCTTTCGTTTCACTATATGACTGACAACTTTTCCATTCTCCTGGGA
CTACAGCGCCTTCGACGGACACTTTAATTCGGTGTGGCTTCACTGTGAAG
CATGCAGCCGCTCGTCGGTGTTGCCGCCTGGAGCCAGGTACAATAAGCGA
CCAAAGATAACCAGTTGATTTTGCTCATCACTTGACATTGCTCTGATGCT
AACTAGTTTTCTCGTGACTAACATTATCCTTTTGCTTTGCTTTGCTTTGC
TTTGCTTTTCTACTTTCTTTCTTTCTTTCTTTTCTATATTTATCTGGATG
TCACCGGCCTGTTGCTTTTACTTCGTCTGCATTGTTTCCTGACCGCTAGG
ACGGCTAGACAACGCATGCATGCGTTGTAAGGCGGCTTCACTGACCTACG
ACAGGCGAGACTTTGGCCCGAAAGTGCTGCTAAGAGATCCACAGCCAAGT
GAAGTCTGGTTTTTCCCTCCCCTTGATTTTGTCCGTCTGTCCTTTCTTTT
TATTTTCTTTTTTTCTTTTTTCTTCCTTTTCGTTTCCACTCCGTCCTTCA
CAATGCTGGCATTGGGTATGGGTATTGGAGACTTGAGTCTCCTTTGCCTC
CCGGGGAAGCCTGGGATGTGCCTGGATGGAGAGTGACTCTCTCTCTCTCT
CTGTCTCTGATAACAGTCAGATTGGTATTTCCACCCGCTATGCCCGAATG
GGACTTGGCATGATGTCTACCCCGATTGGGGGCTGAGAGGCACTGCTCCT
GCCGGAACCAGACAAGTGGGATTCTCCACCCGAGGTTCCCTCAAGGCAGC
AGTTCCAGTGCTGCCTGAGCCCTCAGGTGTTCACCATGGATTGCCAGAGT
CTCCAGGCTAGATGGTCAAGGGTTGTTGCCAGGTAAGAAAGAGTGCCTTC
AGTCTACTGTGGTTCCTCTTCCCCCCCCCCCTTCTGGGAGCTCAGCCTGG
GTTGGCGTGGGTTCGTTTCCGGCCGGCCTCGCAATCTTGCCTTTTTTCCT
TTGGTTCCCCATGGTCTCCCTCCCCCCCCCCCTCCCTTTCGTCCCCTCGA
GCTTCCAATTCGTTCCTCGACCGGCCTGTCCGTCGTCGGTTCTGTCCCTT
TCGCTCTTCCACGATTTCCCCCCCCTCATTCTTCAATTCTGCCGTGTGGA
TTATTAACCTTCCCCAACGGGGGTTACAAGGGTGAAATCGCCCCCAAAAG
AAAAACATAAAAAAAGGAAAGGGACGAAAATTACAGGCGAGGGAAATTTA
GGTGCAAACCATCTCGAAGCTGTTCCCCAAGCACACTCACCAACCCAGAC
ATCGGCTCCCCCAGAACCTGGACGGGTGGGAGAAAAAATTCCACGCCATT
CCCTTTTCACTCTGGGTCTTGGACGCGCCGCTTGAATGGCCCATCCGTGG
CTTTAGCCTCTCGCTCGCTCTCGCTCGCTCTCTCTCTCTCTCTCTCTCTT
ACGCTCTCCCTCCCTCTGATCCTCGCTTCCTCTCTTCTGCTCTCCTTTCT
CCCTCTCTCGCTTGCTTGCCCTCGCCTCTTCCCGATTCACCTTCTCGTGT
CTCGACTCTAATCCTCCCTCGCCCACCTTTCCGTCATCTCATTCACCTCT
TCCCTCCCGACCTTGTCATCCTTTCCTTGTCCTTCTCCCCCTACTGCTGA
CCATCCTTCCGAGTGTCATCCTCCTTGATCCCTCCACCCTCTCTACTCTC
CTTCTCACCTTCCAGCCTCTCCGTTCCTCCATGCGATTCGTGGTCCGTCC
GCCTTCTCACAATCATCGGCTACCGATCCTCGATTTCTTACTTGCCCACG
GTCGCACGCGCCACCGAGGAAGACGACTTTACTGAGACTTGGACCACTTC
GTCCCATTTCGAACCTGATATCCCTATACGATCTTTCGCCGTAATACGAT
CCTCCTATCGCCGAGCAACCTTTATCGGATTTCCTACTTTCACGGGCTCA
TTCCTTCCCGGTTCATTCCATCGATAAAGAGGGTGGCACATTGTGGACTT
TATCACCTGCTTCATCATATTCTAAGGTCGACCATCCCTTTTTGTCACTG
TGGACTGTCGTGAGAGTTTAAGCCAGGCGACGACTACCAGTGAGCAACAG
GTGATATGCGTGCTGGGTTTTGACAGGTTCCCGTAAAACCGTTCGTCCCC
TCGAACCCTCAACAGCGCATTTTTTTCTGTTCAGCTTAAGAGGGGGTATT
CTGTCGGATTATGACAGATACCTCCCCAGTCGCCATCACGCATCCAACCA
CGGAGCCCCCTTCGGTCACCGTCCCTCTGAACTCGCCCATCGTAAACGGC
GCTGTTTCTGACTCGGTCGCCCCTGAAGAAGAAGAGCCGTACACCATCAA
GTGCATCTGCGCTTTCGAGGATGACGATGGTAATACGGTCTTCTGCGAAG
GGTGCGAAACCTGGCAGCATATTGAATGCTACTACCATGGCCGGGATGTG
CCAGAAGTCCATAATTGCGTGGAATGCGAGCCACGTTCCCTCGATGGCCG
GCGCGCCACGGAACGGCAGAGGCGCCTCAGAGAACAGAACGACGGCGGTG
ACCGGAAAGCGAAACGGTCCGGTGCGAAGAGTCACAAGAAAAAGGTCAAG
GAGCATGGTGATCAGGTAAACGGCTTTCATCACCGGTCAGAATCCAACAC
CCGGGATCAGCCCCTTGCGAAGAAAGTCAAGACCAATCATCGTTCCTCGG
GGTCGGTGAGTTCCGTGTCTAATGCACCCAACTTGCCCTCTGATGCGCGC
AAGCGGGCAGCACCCTCAATGAGCCCGACCAAGACATCAGGGCCTTCCAT
TCCTTTGTATTCGCACGAGTTTCTTCATCTTTACGACCAGGGGAAAGATT
ATGCCAACATAGACAGCAACCTGTTTGTCAATCTGCACCTGGCGGCGGAC
TTTGCTGCCTGGGTCACGGAGCCGGATGCTGTTGCCCGTATTGCGAATGG
GCGCTCTCCAAAAGAGATCTTCACGTGGTCTGGTGCAACGCTCGACAAAT
CACGCTGGCCGACATTGTCTACCGAAACGATCACGGACTCGAGCATTGAG
GTGGAAGGTCAACATCCAACTTGGAAAATCCTCAAGACTCGCGATCGTGT
GGGCAAAGACGAGATTGTCGGTGAAATCACGGGCAAGCTTGGTTTCTTAC
GGGACTATTGTCTTGACCCCAGTAATCGATGGCAAGAGCTTCGTCATCCT
GAGCCCTTTGTCTTTTTCCACCCTCAGCTCCCGATTTACATCGATAGTCG
ACATGAGGGAAGCGTGCTCCGCTACGTGCGGCGCTCATGCCGGCCGAACG
TGACCATGAAAACCTACATCACGAATCAGGTCGAGTACCACTTCTGCTTC
GTTGCGAAGGAAGAGATCGCTGCGGACTCGGAAATCACGGCCATGTGGTA
CCTAGATCCTCAACTCTTTGAGTCCACCAATGGTATAGTCAAGCAGGAGG
CCACTGACAGCGCGCACGACGCGCCTGCGATCTGCATCAGTAATGTCCTC
GCCCACTTTGGTGGATGCGCCTGTGTCCCTCCCGCGAACTGTTTGCTGTC
TAGCGTTGATCGACGACGTCACCCAAAGTTGATGGATGTGAACGCGAAAC
AAGCGAGTGCTAAGCGAAAGAAGACAAAGCCCAAGGCGAATATCTCTCCG
CCTGCCACCACAAGCCGGGCGGGTAGTGAGACCACTAAGAACCTTGATGA
GGATGATCAGGCTGACAGCCGTTCTGCATCGGGCTCTATCCGAGGTCAAA
CTCGCAGTCGGGATCTCACCCCTACGTTACAGACTCCTACCGAAGCGTTC
TTGCTCGGGGAATCGGAACTCTCGGCTCGAGACAAGCGTAAGATTGCTGC
AGCAGAGAAGAAGTTTCAACAACTGGAACAAGACCAAGCCTCACACAGAA
AGAAGAAACGGGCTAGTGGCCAATCCAGCCATGGTCCGCGCGAACGCCAG
TCACATTCTCCCCCCTCGGGCGGACCTGTGGGCTCGCTTCCAGGAATGCG
TCACGGATCACCGCGCAAGACATCCGGCAGTCACAGCACACCTAGGCGGT
CTCCTCTGGGGCGTCAACAATACGTGGATTCCGCTATACAGACCGAGCCG
GATGCTAGCGATGGTGTGGTTTCACCTTCTCTGCCCTCCCCTCGTCGACC
CTGTTTTGTGCCCCTAACTCAACGTTTACTGAAAAGATGCTATTCCGATC
GCATCAAGCTCGAGCAAAGCAGCCCATCGCCTGTCACTCCTCGAAGTACT
CTTCTTGAGCATTCTGACTCTTCACCGACTTCCACGAGCCCGCATGAAGC
AGCTCCACTAACAGCCACAACCCCCAGCGTATCTGCCGACAACCAAGATA
CAGAGATGAGGGATGTTGATTCGCCTGTGGAGACCTCGCCATCCCTGTCC
GTTACACATTTCGATGCATCTCCCCTATCTGGACGGGGATCGGTCAAGCC
GCCCTTGCCGCCTCCCTGGCCATCAACTGCAGCGCATAACGCTCGGATAC
CTAGTAATGTTGTGCATAAACAGCGTAACACTGATCTCCGCGTTCCGCTG
CCTCCTGCAACGCTACCTCCGCCCCCTTCAGCCACCAGCCCAGGGTCCAC
AGCCCCGTCGGTGTTGTCCTCACCTTCAACTGCAACTGATGTGACTTCGC
AACCCCACGTTCCCACCACACCGGTGTCTGGCGTGGCAGGCCCTAGCCCA
GTGAAAAAGAAGCTCAGTTTGGGTGACTATCTCATCCGCCGCGGCACCAT
GACTACGCCTACGTCTGAGAAGACTCAAGCGCAGGCAACCGCAATGCTAC
CGCCCACACAACCCGTGCCGCCTCCGGCTAGCCGTGATGGAGCTGCTGCG
GGGCACAACTCTTCTGCGGAGGCCAAGCCAGAACGGGGCCCTCAGGATGT
CACCATGAAGGATATTCGCGGAGCTACGCAGACTTCACACATACCCTCAG
CGACGTGA back to topCoding sequence (CDS) from alignment at ch4:5452387..5457994+ >KJC3_006357-T1 ID=KJC3_006357-T1|Name=KJC3_006357-T1|organism=Aspergillus niger KJC3|type=CDS|length=2748bp|location=Sequence derived from alignment at ch4:5452387..5457994+ (Aspergillus niger KJC3)
ATGACAGATACCTCCCCAGTCGCCATCACGCATCCAACCACGGAGCCCCC
TTCGGTCACCGTCCCTCTGAACTCGCCCATCGTAAACGGCGCTGTTTCTG
ACTCGGTCGCCCCTGAAGAAGAAGAGCCGTACACCATCAAGTGCATCTGC
GCTTTCGAGGATGACGATGGTAATACGGTCTTCTGCGAAGGGTGCGAAAC
CTGGCAGCATATTGAATGCTACTACCATGGCCGGGATGTGCCAGAAGTCC
ATAATTGCGTGGAATGCGAGCCACGTTCCCTCGATGGCCGGCGCGCCACG
GAACGGCAGAGGCGCCTCAGAGAACAGAACGACGGCGGTGACCGGAAAGC
GAAACGGTCCGGTGCGAAGAGTCACAAGAAAAAGGTCAAGGAGCATGGTG
ATCAGGTAAACGGCTTTCATCACCGGTCAGAATCCAACACCCGGGATCAG
CCCCTTGCGAAGAAAGTCAAGACCAATCATCGTTCCTCGGGGTCGGTGAG
TTCCGTGTCTAATGCACCCAACTTGCCCTCTGATGCGCGCAAGCGGGCAG
CACCCTCAATGAGCCCGACCAAGACATCAGGGCCTTCCATTCCTTTGTAT
TCGCACGAGTTTCTTCATCTTTACGACCAGGGGAAAGATTATGCCAACAT
AGACAGCAACCTGTTTGTCAATCTGCACCTGGCGGCGGACTTTGCTGCCT
GGGTCACGGAGCCGGATGCTGTTGCCCGTATTGCGAATGGGCGCTCTCCA
AAAGAGATCTTCACGTGGTCTGGTGCAACGCTCGACAAATCACGCTGGCC
GACATTGTCTACCGAAACGATCACGGACTCGAGCATTGAGGTGGAAGGTC
AACATCCAACTTGGAAAATCCTCAAGACTCGCGATCGTGTGGGCAAAGAC
GAGATTGTCGGTGAAATCACGGGCAAGCTTGGTTTCTTACGGGACTATTG
TCTTGACCCCAGTAATCGATGGCAAGAGCTTCGTCATCCTGAGCCCTTTG
TCTTTTTCCACCCTCAGCTCCCGATTTACATCGATAGTCGACATGAGGGA
AGCGTGCTCCGCTACGTGCGGCGCTCATGCCGGCCGAACGTGACCATGAA
AACCTACATCACGAATCAGGTCGAGTACCACTTCTGCTTCGTTGCGAAGG
AAGAGATCGCTGCGGACTCGGAAATCACGGCCATGTGGTACCTAGATCCT
CAACTCTTTGAGTCCACCAATGGTATAGTCAAGCAGGAGGCCACTGACAG
CGCGCACGACGCGCCTGCGATCTGCATCAGTAATGTCCTCGCCCACTTTG
GTGGATGCGCCTGTGTCCCTCCCGCGAACTGTTTGCTGTCTAGCGTTGAT
CGACGACGTCACCCAAAGTTGATGGATGTGAACGCGAAACAAGCGAGTGC
TAAGCGAAAGAAGACAAAGCCCAAGGCGAATATCTCTCCGCCTGCCACCA
CAAGCCGGGCGGGTAGTGAGACCACTAAGAACCTTGATGAGGATGATCAG
GCTGACAGCCGTTCTGCATCGGGCTCTATCCGAGGTCAAACTCGCAGTCG
GGATCTCACCCCTACGTTACAGACTCCTACCGAAGCGTTCTTGCTCGGGG
AATCGGAACTCTCGGCTCGAGACAAGCGTAAGATTGCTGCAGCAGAGAAG
AAGTTTCAACAACTGGAACAAGACCAAGCCTCACACAGAAAGAAGAAACG
GGCTAGTGGCCAATCCAGCCATGGTCCGCGCGAACGCCAGTCACATTCTC
CCCCCTCGGGCGGACCTGTGGGCTCGCTTCCAGGAATGCGTCACGGATCA
CCGCGCAAGACATCCGGCAGTCACAGCACACCTAGGCGGTCTCCTCTGGG
GCGTCAACAATACGTGGATTCCGCTATACAGACCGAGCCGGATGCTAGCG
ATGGTGTGGTTTCACCTTCTCTGCCCTCCCCTCGTCGACCCTGTTTTGTG
CCCCTAACTCAACGTTTACTGAAAAGATGCTATTCCGATCGCATCAAGCT
CGAGCAAAGCAGCCCATCGCCTGTCACTCCTCGAAGTACTCTTCTTGAGC
ATTCTGACTCTTCACCGACTTCCACGAGCCCGCATGAAGCAGCTCCACTA
ACAGCCACAACCCCCAGCGTATCTGCCGACAACCAAGATACAGAGATGAG
GGATGTTGATTCGCCTGTGGAGACCTCGCCATCCCTGTCCGTTACACATT
TCGATGCATCTCCCCTATCTGGACGGGGATCGGTCAAGCCGCCCTTGCCG
CCTCCCTGGCCATCAACTGCAGCGCATAACGCTCGGATACCTAGTAATGT
TGTGCATAAACAGCGTAACACTGATCTCCGCGTTCCGCTGCCTCCTGCAA
CGCTACCTCCGCCCCCTTCAGCCACCAGCCCAGGGTCCACAGCCCCGTCG
GTGTTGTCCTCACCTTCAACTGCAACTGATGTGACTTCGCAACCCCACGT
TCCCACCACACCGGTGTCTGGCGTGGCAGGCCCTAGCCCAGTGAAAAAGA
AGCTCAGTTTGGGTGACTATCTCATCCGCCGCGGCACCATGACTACGCCT
ACGTCTGAGAAGACTCAAGCGCAGGCAACCGCAATGCTACCGCCCACACA
ACCCGTGCCGCCTCCGGCTAGCCGTGATGGAGCTGCTGCGGGGCACAACT
CTTCTGCGGAGGCCAAGCCAGAACGGGGCCCTCAGGATGTCACCATGAAG
GATATTCGCGGAGCTACGCAGACTTCACACATACCCTCAGCGACGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011011 |
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR001214 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5452387..5457994 + |
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