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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5482222..5485734- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006363-T1 ID=KJC3_006363-T1|Name=KJC3_006363-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3513bp|location=Sequence derived from alignment at ch4:5482222..5485734- (Aspergillus niger KJC3)
CTGACTTATCGGTTCCTTTCTTGGTAACACTTGTTTGTCTTTAACTTCAT
CGATCTCTTTGGTTGGGAGATTCAACGTGGGTATTTGCCCCGGAATTCGG
GCCATGATATACAAGTTATGCCATGATGCTTGTGATCCTGACCGGTGGAA
TATTCGTCATGGACCTATTCTTATCCCACTTTCAGAGAGATAACCTCAGA
GAAGTCGGAGATAGTCTATACAGGTCTGTAGTGATTCTGGAAGGATGTTG
CTAGTATGTATTTTTCATTATGTTCTTCTTCAGCTTGTCTGTCGAGAATG
ATGCACCTGACCTCGCATCATGCAGGCTGCCTCAGGCATGATAGGCTCCC
GTGCCTGGCCCGACTCCGAGAGACTCTCCGTCAACAATCAATACAATTCT
TTCATTGAACCGGCCCAGTCCATGTGAATAGCTGGCAGTGGCTCCTATCA
AATCTATCTTAAATATATTTTCTGCTTAACCAAACACCTAATTTCTTGTT
CCCTCTTCCCGACCAGTGATCTCATCGAATCTCCCCGGTCGCAGTCCAAA
AATATTTCCTTCTCCGCATCTATCCCTCCGCTCCCAGTGCCGTACCTCTG
ATGTTTGCTATGCGCGCCATTGACCTTTCCTAATAATATACCCTGAAACG
ATAGACGATTGACACAACACTGCACCCGCAGTTACGGGTGGTGCAGCCAA
ATCTCCCCCACCAGCGCAATACCCATTTCGAAACAATGAAGGACCCGCGC
GCCAGCAAGAGGAGAAGGGTGTCGGACGCACAAGTGGTTGACGAAGATGG
AGATACTACCATGGGCGAGGGCGCTCAAGACGCACCCACCTCGCCAGTAA
TCGAACAGACGAAAGCCGCGTCTCCTGCAGCCGAAGAGCCAGAAACGCCC
GCTACATCGAGATCAAAGCGGCGGCGATCTTCGCCGGGCGCCGCTGTGAT
TGAAAAGGAGAACGACGAGGTACAAGCTACAGATACACCTACGAGGGGTG
GAGTACGGTCGAGTGGGCGACAGCGCCGAGCGCCGCAGAGGTACGGAGAC
GAGGTCGTGAACACGCCATCGGGCAGGAGAAACGCTTCTACACCAGGTGC
GAACGGGTCAACGACGAGGAGCGCCCGCAGGGCTAAATATGTCTCGGAAA
CGGAGGGTGACGAGGAAGAGGAGGAAGCAGAAGTCGACGACGATGACGAC
GAGGACGAACCGTCTCCGCAACCGAAAAGACGACCGGCACGGACGCGGTC
GAAGAAGGCCACAGTTCGGTTCGAAACGGATAAGGACGATGCGTCCAAGA
AACGGGATGAGTCGCAGATATCTCCTACGCCGGATGATTATCAGGATGGG
CTAGAAGATCTCGTGTCGATGCAGTTACAACAGGATCTTGCCAGCAATGA
CTTGACCAGCACTGAGCAAACCGTTCCCGCCAACGGGGAGCCGCTTCCAG
ACTATGCTGCGAAACTCCAAGCGCTTGTGCAAGAAGGTCTGACAGAGGAG
CTGCGGTTACTGACAGGATATGTTACGCAGAAGCTGAACGGCAAGAGACG
GGTGCCACTGAAAGGGCTCGAGACTGAGTACCACAAGGTCAACCATTTGA
TCGAACAAACTGTTGCTGTCGGTGAAGGTAACTCAATGCTACTTCTCGGA
TCTCGCGGAAGCGGGAAAACTGCGATCGTTGAGACGATTATCTCGACGTT
GGGAAAGTCGTACAAGAATGACTTCCACGTTGTCCGTCTTAATGGCTTCC
TTCATACAGACGACCGATTGGCGCTCCGCGAAATGTGGCGTCAGCTTGGC
CGTGAGACAAACACTGAAGACGAAGCTGGCAAAGTTAGCAGCTATGCTGA
TACCATGGCTACACTCCTTGCTCTTCTGTCGCACCCAGAGGAGCTCTATG
GTCCGTCCAATGAATCAGGTACTGCGACCGCTGCAAAATCCATCGTCATT
GTTCTGGATGAATTCGATTTGTTTGTTACACACCCTCGCCAAACACTGCT
GTACAACTTGTTTGATATCGCGCAGGCGCGCAAGGCCCCAATTGCAGTGA
TTGGGCTTACTACCAAGGTGGATGTGACGGAAATGTTGGAGAAGCGAGTC
AAAAGTCGCTTCAGCCACCGATACGTCTACGTTCCACTACCACGATCCCT
GGAAACCTTTTCTGACATTTGCTTCGCCGGACTTAACCTGGAAGACGAGG
AAATTTCGGAACTGCTTGAATTGGCTGATGCCAAAGAGCGAGCCGTCCTC
CACTCTGACAGCTGGGGCCGCTTACTGGAAGGATGGAGAGCTTATCTGCA
GGTAAGTGCGCCTCATTGCGCGACAAATAACCACACAGACCACGTTTTGC
TGACCCTAGCGGGCAATTCCAGGGCCTATGGATCGACGAGGCGTTCACAT
CCCACCTACGAAGGATATACCATCAAACTAAATCCGTGAAGGAATTCTTC
ACGAGCGCTTTGATTGGACTGAGCGACCTCTATCACAGCACCCACTTTCT
TACTACTCCCGAAGGAACGTCTTCCCTGGAGATCCCCACCGCTACCACCT
TCACCAGTCACCTCCTATCCTGCCCGGACCCTGCCCCTCTCCCATTCTCC
GCGTCGACCACCGCCTCCGCAAGTCCCTCATCTCTCCCGCTTTCGCTTCT
CCTAGCCGCAACCCGCTTAGCAGCCCTGTACGAACCAGGCCTCGAGACGA
CGCAGCTCCAGAGCGCTGCGCCACTAGCGCTCTCCTTCCCCGCAGCCTAC
GCAGAGTACGTGCGACTGCTAACGACCGCCAAGACGTCAGCCTCGGTGTC
CGGCGCAGCGGTGACTCCGGGACGAGTCTGGGGTCGGGACGTGGCGCGCG
AGGCATGGGAGAAGCTCGTCAGCTGGGGGCTGATCAGCCCCGTTGGCGGG
GGCAGTGGCACTGCAGACGGACGGATGTTCCGGGTGGAAATCAGCTTCGA
CGAGGTGGTCGAGATGGCCGGCACGGGAGGATCATTAGGACGGTGGTGGC
GGGATGGCTGAGCAGGAAAAAAAAGCGAACGTTGCCCTGCACGGTGCAGG
GAACTGTCCGTGTGAGGTGAGGGGGGAAAAAGGAAGGAAGGAAGGAAGGG
AAACTCAGCCTTGCTTAGGTTCAACAACGGGATGTAGGTGTCTTAGACTA
CTTACTTGTACTAGTAGTACTATGTTGCATTGCATGAAGAGGAATCTTAC
ACACATTGTCACATTGCACGTTGCACATTGCACATTCCATTACTCCACAG
GTTGAGGGTGGGACGGACGGGTGGAAGGTACTTACTTTCTTTGTTTATTT
CGTACGAAGCATTCATCTGCCTATCCCCATCATACTAGGCAGCAGCAGCA
GCAGCAGCAGCTAGCTACCCAGTTGCCTAGACACAAACAAACAAGTAAAA
TATAGATGGGAATCTGCCTAGACGTCTGCCTAGGCGCGGGGGAGAGAAAC
AAGAAAACAGACAAAAGATGATGGAGGGGAAAAAGGAAACTGAAAATCCA
CCTTGCAGAAAGC back to topCoding sequence (CDS) from alignment at ch4:5482222..5485734- >KJC3_006363-T1 ID=KJC3_006363-T1|Name=KJC3_006363-T1|organism=Aspergillus niger KJC3|type=CDS|length=4410bp|location=Sequence derived from alignment at ch4:5482222..5485734- (Aspergillus niger KJC3)
GGCCTATGGATCGACGAGGCGTTCACATCCCACCTACGAAGGATATACCA
TCAAACTAAATCCGTGAAGGAATTCTTCACGAGCGCTTTGATTGGACTGA
GCGACCTCTATCACAGCACCCACTTTCTTACTACTCCCGAAGGAACGTCT
TCCCTGGAGATCCCCACCGCTACCACCTTCACCAGTCACCTCCTATCCTG
CCCGGACCCTGCCCCTCTCCCATTCTCCGCGTCGACCACCGCCTCCGCAA
GTCCCTCATCTCTCCCGCTTTCGCTTCTCCTAGCCGCAACCCGCTTAGCA
GCCCTGTACGAACCAGGCCTCGAGACGACGCAGCTCCAGAGCGCTGCGCC
ACTAGCGCTCTCCTTCCCCGCAGCCTACGCAGAGTACGTGCGACTGCTAA
CGACCGCCAAGACGTCAGCCTCGGTGTCCGGCGCAGCGGTGACTCCGGGA
CGAGTCTGGGGTCGGGACGTGGCGCGCGAGGCATGGGAGAAGCTCGTCAG
CTGGGGGCTGATCAGCCCCGTTGGCGGGGGCAGTGGCACTGCAGACGGAC
GGATGTTCCGGGTGGAAATCAGCTTCGACGAGGTGGTCGAGATGGCCGGC
ACGGGAGGATCATTAGGACGGTGGTGGCGGGATGGCTGAATGAAGGACCC
GCGCGCCAGCAAGAGGAGAAGGGTGTCGGACGCACAAGTGGTTGACGAAG
ATGGAGATACTACCATGGGCGAGGGCGCTCAAGACGCACCCACCTCGCCA
GTAATCGAACAGACGAAAGCCGCGTCTCCTGCAGCCGAAGAGCCAGAAAC
GCCCGCTACATCGAGATCAAAGCGGCGGCGATCTTCGCCGGGCGCCGCTG
TGATTGAAAAGGAGAACGACGAGGTACAAGCTACAGATACACCTACGAGG
GGTGGAGTACGGTCGAGTGGGCGACAGCGCCGAGCGCCGCAGAGGTACGG
AGACGAGGTCGTGAACACGCCATCGGGCAGGAGAAACGCTTCTACACCAG
GTGCGAACGGGTCAACGACGAGGAGCGCCCGCAGGGCTAAATATGTCTCG
GAAACGGAGGGTGACGAGGAAGAGGAGGAAGCAGAAGTCGACGACGATGA
CGACGAGGACGAACCGTCTCCGCAACCGAAAAGACGACCGGCACGGACGC
GGTCGAAGAAGGCCACAGTTCGGTTCGAAACGGATAAGGACGATGCGTCC
AAGAAACGGGATGAGTCGCAGATATCTCCTACGCCGGATGATTATCAGGA
TGGGCTAGAAGATCTCGTGTCGATGCAGTTACAACAGGATCTTGCCAGCA
ATGACTTGACCAGCACTGAGCAAACCGTTCCCGCCAACGGGGAGCCGCTT
CCAGACTATGCTGCGAAACTCCAAGCGCTTGTGCAAGAAGGTCTGACAGA
GGAGCTGCGGTTACTGACAGGATATGTTACGCAGAAGCTGAACGGCAAGA
GACGGGTGCCACTGAAAGGGCTCGAGACTGAGTACCACAAGGTCAACCAT
TTGATCGAACAAACTGTTGCTGTCGGTGAAGGTAACTCAATGCTACTTCT
CGGATCTCGCGGAAGCGGGAAAACTGCGATCGTTGAGACGATTATCTCGA
CGTTGGGAAAGTCGTACAAGAATGACTTCCACGTTGTCCGTCTTAATGGC
TTCCTTCATACAGACGACCGATTGGCGCTCCGCGAAATGTGGCGTCAGCT
TGGCCGTGAGACAAACACTGAAGACGAAGCTGGCAAAGTTAGCAGCTATG
CTGATACCATGGCTACACTCCTTGCTCTTCTGTCGCACCCAGAGGAGCTC
TATGGTCCGTCCAATGAATCAGGTACTGCGACCGCTGCAAAATCCATCGT
CATTGTTCTGGATGAATTCGATTTGTTTGTTACACACCCTCGCCAAACAC
TGCTGTACAACTTGTTTGATATCGCGCAGGCGCGCAAGGCCCCAATTGCA
GTGATTGGGCTTACTACCAAGGTGGATGTGACGGAAATGTTGGAGAAGCG
AGTCAAAAGTCGCTTCAGCCACCGATACGTCTACGTTCCACTACCACGAT
CCCTGGAAACCTTTTCTGACATTTGCTTCGCCGGACTTAACCTGGAAGAC
GAGGAAATTTCGGAACTGCTTGAATTGGCTGATGCCAAAGAGCGAGCCGT
CCTCCACTCTGACAGCTGGGGCCGCTTACTGGAAGGATGGAGAGCTTATC
TGCAGGGCCTATGGATCGACGAGGCGTTCACATCCCACCTACGAAGGATA
TACCATCAAACTAAATCCGTGAAGGAATTCTTCACGAGCGCTTTGATTGG
ACTGAGCGACCTCTATCACAGCACCCACTTTCTTACTACTCCCGAAGGAA
CGTCTTCCCTGGAGATCCCCACCGCTACCACCTTCACCAGTCACCTCCTA
TCCTGCCCGGACCCTGCCCCTCTCCCATTCTCCGCGTCGACCACCGCCTC
CGCAAGTCCCTCATCTCTCCCGCTTTCGCTTCTCCTAGCCGCAACCCGCT
TAGCAGCCCTGTACGAACCAGGCCTCGAGACGACGCAGCTCCAGAGCGCT
GCGCCACTAGCGCTCTCCTTCCCCGCAGCCTACGCAGAGTACGTGCGACT
GCTAACGACCGCCAAGACGTCAGCCTCGGTGTCCGGCGCAGCGGTGACTC
CGGGACGAGTCTGGGGTCGGGACGTGGCGCGCGAGGCATGGGAGAAGCTC
GTCAGCTGGGGGCTGATCAGCCCCGTTGGCGGGGGCAGTGGCACTGCAGA
CGGACGGATGTTCCGGGTGGAAATCAGCTTCGACGAGGTGGTCGAGATGG
CCGGCACGGGAGGATCATTAGGACGGTGGTGGCGGGATGGCTGAATGAAG
GACCCGCGCGCCAGCAAGAGGAGAAGGGTGTCGGACGCACAAGTGGTTGA
CGAAGATGGAGATACTACCATGGGCGAGGGCGCTCAAGACGCACCCACCT
CGCCAGTAATCGAACAGACGAAAGCCGCGTCTCCTGCAGCCGAAGAGCCA
GAAACGCCCGCTACATCGAGATCAAAGCGGCGGCGATCTTCGCCGGGCGC
CGCTGTGATTGAAAAGGAGAACGACGAGGTACAAGCTACAGATACACCTA
CGAGGGGTGGAGTACGGTCGAGTGGGCGACAGCGCCGAGCGCCGCAGAGG
TACGGAGACGAGGTCGTGAACACGCCATCGGGCAGGAGAAACGCTTCTAC
ACCAGGTGCGAACGGGTCAACGACGAGGAGCGCCCGCAGGGCTAAATATG
TCTCGGAAACGGAGGGTGACGAGGAAGAGGAGGAAGCAGAAGTCGACGAC
GATGACGACGAGGACGAACCGTCTCCGCAACCGAAAAGACGACCGGCACG
GACGCGGTCGAAGAAGGCCACAGTTCGGTTCGAAACGGATAAGGACGATG
CGTCCAAGAAACGGGATGAGTCGCAGATATCTCCTACGCCGGATGATTAT
CAGGATGGGCTAGAAGATCTCGTGTCGATGCAGTTACAACAGGATCTTGC
CAGCAATGACTTGACCAGCACTGAGCAAACCGTTCCCGCCAACGGGGAGC
CGCTTCCAGACTATGCTGCGAAACTCCAAGCGCTTGTGCAAGAAGGTCTG
ACAGAGGAGCTGCGGTTACTGACAGGATATGTTACGCAGAAGCTGAACGG
CAAGAGACGGGTGCCACTGAAAGGGCTCGAGACTGAGTACCACAAGGTCA
ACCATTTGATCGAACAAACTGTTGCTGTCGGTGAAGGTAACTCAATGCTA
CTTCTCGGATCTCGCGGAAGCGGGAAAACTGCGATCGTTGAGACGATTAT
CTCGACGTTGGGAAAGTCGTACAAGAATGACTTCCACGTTGTCCGTCTTA
ATGGCTTCCTTCATACAGACGACCGATTGGCGCTCCGCGAAATGTGGCGT
CAGCTTGGCCGTGAGACAAACACTGAAGACGAAGCTGGCAAAGTTAGCAG
CTATGCTGATACCATGGCTACACTCCTTGCTCTTCTGTCGCACCCAGAGG
AGCTCTATGGTCCGTCCAATGAATCAGGTACTGCGACCGCTGCAAAATCC
ATCGTCATTGTTCTGGATGAATTCGATTTGTTTGTTACACACCCTCGCCA
AACACTGCTGTACAACTTGTTTGATATCGCGCAGGCGCGCAAGGCCCCAA
TTGCAGTGATTGGGCTTACTACCAAGGTGGATGTGACGGAAATGTTGGAG
AAGCGAGTCAAAAGTCGCTTCAGCCACCGATACGTCTACGTTCCACTACC
ACGATCCCTGGAAACCTTTTCTGACATTTGCTTCGCCGGACTTAACCTGG
AAGACGAGGAAATTTCGGAACTGCTTGAATTGGCTGATGCCAAAGAGCGA
GCCGTCCTCCACTCTGACAGCTGGGGCCGCTTACTGGAAGGATGGAGAGC
TTATCTGCAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006363-T1.utr3p1 | KJC3_006363-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092630MJ |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR041664 |
| DBxref | InterPro:IPR032705 |
| DBxref | InterPro:IPR003593 |
| DBxref | PFAM:PF14629 |
| DBxref | PFAM:PF13191 |
| DBxref | PFAM:PF00004 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5482222..5485734 - |
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