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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5489585..5490431- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006366-T1 ID=KJC3_006366-T1|Name=KJC3_006366-T1|organism=Aspergillus niger KJC3|type=mRNA|length=847bp|location=Sequence derived from alignment at ch4:5489585..5490431- (Aspergillus niger KJC3)
ATGAATCGTCAGTCAGTTTTACGGCTGGCTCGCCAGACCGGAGCTTTCCC
GCTGGCCGAATTGCCTCCTCCCTACCTCGCCCCGTCTCTCCATTTCTCTA
TGAACCGGTCGACCGTCCAGTGCTCGAACTTTTCTTCCACCGCCGCTGTT
GCCGCTGGCCGTGGTGATCTCAACAAAGTCCGCGGCGTGTCCGCTATTCA
CCGCACTGGCCCCAAGTACAAATTGGGTGTGTCCAAGTACCCATTGCCTA
AGCCGGTTTCCCCAGACGCTCTCCCGAAGCGAAATGCCACACCAGACCAT
GGACTCTGGGGTTTCTTCCCCACGGACCGGACCGCTTTGAGTACGCCGAC
ATACGACATTGAATGCGGTTAGTTTGGAACCATATAAGGCTGTGGTGACG
TTGTGATGCTTACTATTGATCGTTTAGGCCGCTCGTGGTCTATTCAGGAA
CTTCGTGAGAAGTCATGGGACGATCTCCATTCCCTGTGGTGGGTCTGCGT
CAAGGAGCGCAATCGCATAGCTACGAGCGATATGGAAAGGAAGAGATTGA
AGGCTGGTTATGGAGAGTGGGAATCCTCTGAGCGGGATCGTGTGGTAGGT
TCAGTCCTGTTGCTGGTTTATGTTTCAAGGCTCATGAAAGCTACAAACGT
CTTACTACGAAAATTATATACAACATTAATGGGCTGCTGCTCGCCTTGGT
GCTCAATGTGCTAATGAATGGCTTTCTTAGATCCGCGTCACGCAAAACGG
CATCAAGCACGTTCTTCGGGAAAGATGGTACGCCTGGGAGGAGGCACAGC
GTCTCTACAGAAAGGGCTACCGGCCTCAGGAGGATAGCCAGGAGTAA back to topCoding sequence (CDS) from alignment at ch4:5489585..5490431- >KJC3_006366-T1 ID=KJC3_006366-T1|Name=KJC3_006366-T1|organism=Aspergillus niger KJC3|type=CDS|length=1953bp|location=Sequence derived from alignment at ch4:5489585..5490431- (Aspergillus niger KJC3)
ATCCGCGTCACGCAAAACGGCATCAAGCACGTTCTTCGGGAAAGATGGTA
CGCCTGGGAGGAGGCACAGCGTCTCTACAGAAAGGGCTACCGGCCTCAGG
AGGATAGCCAGGAGTAAGCCGCTCGTGGTCTATTCAGGAACTTCGTGAGA
AGTCATGGGACGATCTCCATTCCCTGTGGTGGGTCTGCGTCAAGGAGCGC
AATCGCATAGCTACGAGCGATATGGAAAGGAAGAGATTGAAGGCTGGTTA
TGGAGAGTGGGAATCCTCTGAGCGGGATCGTGTGATGAATCGTCAGTCAG
TTTTACGGCTGGCTCGCCAGACCGGAGCTTTCCCGCTGGCCGAATTGCCT
CCTCCCTACCTCGCCCCGTCTCTCCATTTCTCTATGAACCGGTCGACCGT
CCAGTGCTCGAACTTTTCTTCCACCGCCGCTGTTGCCGCTGGCCGTGGTG
ATCTCAACAAAGTCCGCGGCGTGTCCGCTATTCACCGCACTGGCCCCAAG
TACAAATTGGGTGTGTCCAAGTACCCATTGCCTAAGCCGGTTTCCCCAGA
CGCTCTCCCGAAGCGAAATGCCACACCAGACCATGGACTCTGGGGTTTCT
TCCCCACGGACCGGACCGCTTTGAGTACGCCGACATACGACATTGAATGC
GATCCGCGTCACGCAAAACGGCATCAAGCACGTTCTTCGGGAAAGATGGT
ACGCCTGGGAGGAGGCACAGCGTCTCTACAGAAAGGGCTACCGGCCTCAG
GAGGATAGCCAGGAGTAAGCCGCTCGTGGTCTATTCAGGAACTTCGTGAG
AAGTCATGGGACGATCTCCATTCCCTGTGGTGGGTCTGCGTCAAGGAGCG
CAATCGCATAGCTACGAGCGATATGGAAAGGAAGAGATTGAAGGCTGGTT
ATGGAGAGTGGGAATCCTCTGAGCGGGATCGTGTGATGAATCGTCAGTCA
GTTTTACGGCTGGCTCGCCAGACCGGAGCTTTCCCGCTGGCCGAATTGCC
TCCTCCCTACCTCGCCCCGTCTCTCCATTTCTCTATGAACCGGTCGACCG
TCCAGTGCTCGAACTTTTCTTCCACCGCCGCTGTTGCCGCTGGCCGTGGT
GATCTCAACAAAGTCCGCGGCGTGTCCGCTATTCACCGCACTGGCCCCAA
GTACAAATTGGGTGTGTCCAAGTACCCATTGCCTAAGCCGGTTTCCCCAG
ACGCTCTCCCGAAGCGAAATGCCACACCAGACCATGGACTCTGGGGTTTC
TTCCCCACGGACCGGACCGCTTTGAGTACGCCGACATACGACATTGAATG
CGATCCGCGTCACGCAAAACGGCATCAAGCACGTTCTTCGGGAAAGATGG
TACGCCTGGGAGGAGGCACAGCGTCTCTACAGAAAGGGCTACCGGCCTCA
GGAGGATAGCCAGGAGTAAGCCGCTCGTGGTCTATTCAGGAACTTCGTGA
GAAGTCATGGGACGATCTCCATTCCCTGTGGTGGGTCTGCGTCAAGGAGC
GCAATCGCATAGCTACGAGCGATATGGAAAGGAAGAGATTGAAGGCTGGT
TATGGAGAGTGGGAATCCTCTGAGCGGGATCGTGTGATGAATCGTCAGTC
AGTTTTACGGCTGGCTCGCCAGACCGGAGCTTTCCCGCTGGCCGAATTGC
CTCCTCCCTACCTCGCCCCGTCTCTCCATTTCTCTATGAACCGGTCGACC
GTCCAGTGCTCGAACTTTTCTTCCACCGCCGCTGTTGCCGCTGGCCGTGG
TGATCTCAACAAAGTCCGCGGCGTGTCCGCTATTCACCGCACTGGCCCCA
AGTACAAATTGGGTGTGTCCAAGTACCCATTGCCTAAGCCGGTTTCCCCA
GACGCTCTCCCGAAGCGAAATGCCACACCAGACCATGGACTCTGGGGTTT
CTTCCCCACGGACCGGACCGCTTTGAGTACGCCGACATACGACATTGAAT
GCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005761 | mitochondrial ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264BWL |
| DBxref | InterPro:IPR038340 |
| DBxref | InterPro:IPR010729 |
| DBxref | PFAM:PF06984 |
| Product | 54S ribosomal protein L4 mitochondrial |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5489585..5490431 - |
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