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KJC3_006381-T1, KJC3_006381-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006381-T1
Unique NameKJC3_006381-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5518283..5519928-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006381-T1 ID=KJC3_006381-T1|Name=KJC3_006381-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1646bp|location=Sequence derived from alignment at ch4:5518283..5519928- (Aspergillus niger KJC3)
GCATAAAATCGAACATCAATTGATGAAGATGGACAATCCAACGTGCCGTC
CCGACACCAGGGCTGTGTGGATCACGACTGAAAGCTCACCCGAGCTCATC
AATTCCATTCCTGAGCTGACCTCCAAGGATCTCAGGTCCCAAGAGGGGTA
GCTGAATAGTACTTATCTGGATACTTATACTCACGAATCGGCCAGCACTC
CCATGACCGTGCAGCATCATTCCTCCATTGCTTCTATCATCAATTATCCC
ATCGAGTTGAAACTCACTCCACATCCACTATCCGCTAGACAGAACGGATA
GAATCTCTAGCACATCCAGTCACCATCTACTTCACTCACAACAGTGGAGA
TCACCGCGCAGCCCCACACATCCGACATCCGAGGCGTTGTTTCTTCGTTT
GTTCCTTCGTTTGTTCTTTCCAGCTGACAAAACATCGTCACGGAAACAAA
AAGGGGATATTCCCGTCGTCATTCACAGCACAAACCAGTGTGCGCACAAC
ACACCAGCGCGCACCACATAGCACCTAACAGCACTGCACAACACAGCAAA
CATGGCTCTTGAACTAAAAGAAAAGGGCAACCAGCTCTTTAAAGAAGGCG
ATTACAATGGCGCCGAGGAGATGTATTCACAAGCGTGAGCATATATCCCA
CTACCCCGCTAACACCCAAACCTCCACTAAATACCAAGCGTATACTAACC
ACCGAATACCTACAACAAACAGAATCCTCAAGAACCCTAAAGAACCCACC
TTCTTCTCCAACCGCGCCCTCACCCGCATCCGTCTCGAAAACTGGGCCGG
AGTTGAGCACGATGCCCGCGCCGCCATCGATCTGTACGGCGCCAAATCTC
CTACTAGTTTGAAATCCTCCTGGTATCTGGCACAAGCGCTGTTGGGCTTG
CAACGACCTCAGGAAGCATACGATGTAGCCATTGAAGGGTATAAGGCGAG
TCTGGCGGCGAAGAACATCCAGACGGAGAATTTGTCGCGGACGGTGCTGC
GCGCTAAGCAGGCAATTTGGGCGGCCAAGGAGACGGCGCGGATAAGGGAG
TTGGATGAGACGCTGGCGAGTGTGGAGGGGCTGATTGAGGCGGAGATGGA
GAGGGGGTTGACGGAGTTGAAGGGGCGGCTGGAGAAGGGCGAGATTGGGG
AGATTGGGTTTAGGGAGGATGAGAGGGAGATTAGAGAGGATGCTGAGCGG
AAGGTGCAGAGGGTGAGGGAGGCGTTTGCGATTGCGTCGGAGGGGAAGGT
GGTTGAGAGAGTAAGTTCTTCCTTCTTCCTTTTCGGTGAGTTACTAGTGA
GTTGTGCTGATAATATGGTATAGGTTGTGCCTGATTATCTGGTGGATGGA
ATTACGTTTGAGATTATGCATGACCCTGTTATCACTCCATCCGGGACCAG
CTTTGACCGGTTTGGCATCACCAAGTACGTGGAGCAGGCCAAGGTTGACC
CCATCACACGAGTGCCGATGACGGTGAATGATCTTCGGCCGAATTATGCG
TTGAAGGCGGCGTGCGAGGAGTTCCTGGATAAGAATGGCTGGGCAGTGGA
TTGGTGATTAATTGCACAATTAGTATGATTAGCATGGCGTTGGTAGTAGA
CTACTTGATACCATTAACAGGACATATGCTTGTATACTATATTCAG
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Coding sequence (CDS) from alignment at ch4:5518283..5519928-

>KJC3_006381-T1 ID=KJC3_006381-T1|Name=KJC3_006381-T1|organism=Aspergillus niger KJC3|type=CDS|length=2565bp|location=Sequence derived from alignment at ch4:5518283..5519928- (Aspergillus niger KJC3)
GTTGTGCCTGATTATCTGGTGGATGGAATTACGTTTGAGATTATGCATGA
CCCTGTTATCACTCCATCCGGGACCAGCTTTGACCGGTTTGGCATCACCA
AGTACGTGGAGCAGGCCAAGGTTGACCCCATCACACGAGTGCCGATGACG
GTGAATGATCTTCGGCCGAATTATGCGTTGAAGGCGGCGTGCGAGGAGTT
CCTGGATAAGAATGGCTGGGCAGTGGATTGGTGAAATCCTCAAGAACCCT
AAAGAACCCACCTTCTTCTCCAACCGCGCCCTCACCCGCATCCGTCTCGA
AAACTGGGCCGGAGTTGAGCACGATGCCCGCGCCGCCATCGATCTGTACG
GCGCCAAATCTCCTACTAGTTTGAAATCCTCCTGGTATCTGGCACAAGCG
CTGTTGGGCTTGCAACGACCTCAGGAAGCATACGATGTAGCCATTGAAGG
GTATAAGGCGAGTCTGGCGGCGAAGAACATCCAGACGGAGAATTTGTCGC
GGACGGTGCTGCGCGCTAAGCAGGCAATTTGGGCGGCCAAGGAGACGGCG
CGGATAAGGGAGTTGGATGAGACGCTGGCGAGTGTGGAGGGGCTGATTGA
GGCGGAGATGGAGAGGGGGTTGACGGAGTTGAAGGGGCGGCTGGAGAAGG
GCGAGATTGGGGAGATTGGGTTTAGGGAGGATGAGAGGGAGATTAGAGAG
GATGCTGAGCGGAAGGTGCAGAGGGTGAGGGAGGCGTTTGCGATTGCGTC
GGAGGGGAAGGTGGTTGAGAGAATGGCTCTTGAACTAAAAGAAAAGGGCA
ACCAGCTCTTTAAAGAAGGCGATTACAATGGCGCCGAGGAGATGTATTCA
CAAGCGTTGTGCCTGATTATCTGGTGGATGGAATTACGTTTGAGATTATG
CATGACCCTGTTATCACTCCATCCGGGACCAGCTTTGACCGGTTTGGCAT
CACCAAGTACGTGGAGCAGGCCAAGGTTGACCCCATCACACGAGTGCCGA
TGACGGTGAATGATCTTCGGCCGAATTATGCGTTGAAGGCGGCGTGCGAG
GAGTTCCTGGATAAGAATGGCTGGGCAGTGGATTGGTGAAATCCTCAAGA
ACCCTAAAGAACCCACCTTCTTCTCCAACCGCGCCCTCACCCGCATCCGT
CTCGAAAACTGGGCCGGAGTTGAGCACGATGCCCGCGCCGCCATCGATCT
GTACGGCGCCAAATCTCCTACTAGTTTGAAATCCTCCTGGTATCTGGCAC
AAGCGCTGTTGGGCTTGCAACGACCTCAGGAAGCATACGATGTAGCCATT
GAAGGGTATAAGGCGAGTCTGGCGGCGAAGAACATCCAGACGGAGAATTT
GTCGCGGACGGTGCTGCGCGCTAAGCAGGCAATTTGGGCGGCCAAGGAGA
CGGCGCGGATAAGGGAGTTGGATGAGACGCTGGCGAGTGTGGAGGGGCTG
ATTGAGGCGGAGATGGAGAGGGGGTTGACGGAGTTGAAGGGGCGGCTGGA
GAAGGGCGAGATTGGGGAGATTGGGTTTAGGGAGGATGAGAGGGAGATTA
GAGAGGATGCTGAGCGGAAGGTGCAGAGGGTGAGGGAGGCGTTTGCGATT
GCGTCGGAGGGGAAGGTGGTTGAGAGAATGGCTCTTGAACTAAAAGAAAA
GGGCAACCAGCTCTTTAAAGAAGGCGATTACAATGGCGCCGAGGAGATGT
ATTCACAAGCGTTGTGCCTGATTATCTGGTGGATGGAATTACGTTTGAGA
TTATGCATGACCCTGTTATCACTCCATCCGGGACCAGCTTTGACCGGTTT
GGCATCACCAAGTACGTGGAGCAGGCCAAGGTTGACCCCATCACACGAGT
GCCGATGACGGTGAATGATCTTCGGCCGAATTATGCGTTGAAGGCGGCGT
GCGAGGAGTTCCTGGATAAGAATGGCTGGGCAGTGGATTGGTGAAATCCT
CAAGAACCCTAAAGAACCCACCTTCTTCTCCAACCGCGCCCTCACCCGCA
TCCGTCTCGAAAACTGGGCCGGAGTTGAGCACGATGCCCGCGCCGCCATC
GATCTGTACGGCGCCAAATCTCCTACTAGTTTGAAATCCTCCTGGTATCT
GGCACAAGCGCTGTTGGGCTTGCAACGACCTCAGGAAGCATACGATGTAG
CCATTGAAGGGTATAAGGCGAGTCTGGCGGCGAAGAACATCCAGACGGAG
AATTTGTCGCGGACGGTGCTGCGCGCTAAGCAGGCAATTTGGGCGGCCAA
GGAGACGGCGCGGATAAGGGAGTTGGATGAGACGCTGGCGAGTGTGGAGG
GGCTGATTGAGGCGGAGATGGAGAGGGGGTTGACGGAGTTGAAGGGGCGG
CTGGAGAAGGGCGAGATTGGGGAGATTGGGTTTAGGGAGGATGAGAGGGA
GATTAGAGAGGATGCTGAGCGGAAGGTGCAGAGGGTGAGGGAGGCGTTTG
CGATTGCGTCGGAGGGGAAGGTGGTTGAGAGAATGGCTCTTGAACTAAAA
GAAAAGGGCAACCAGCTCTTTAAAGAAGGCGATTACAATGGCGCCGAGGA
GATGTATTCACAAGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006381KJC3_006381Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006381-T1KJC3_006381-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006381-T1.cdsKJC3_006381-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006381-T1.utr3p1KJC3_006381-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006381-T1.exon3KJC3_006381-T1.exon3Aspergillus niger KJC3exon
KJC3_006381-T1.exon2KJC3_006381-T1.exon2Aspergillus niger KJC3exon
KJC3_006381-T1.exon1KJC3_006381-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006381-T1.utr5p1KJC3_006381-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013026
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR003613
DBxrefInterPro:IPR019734
DBxrefPFAM:PF04564
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5518283..5519928 -
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