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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5557232..5559296+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006396-T1 ID=KJC3_006396-T1|Name=KJC3_006396-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2065bp|location=Sequence derived from alignment at ch4:5557232..5559296+ (Aspergillus niger KJC3)
GTCTCACAATGGACGATCGTTACCCAACCGTATAGATGCCGAACTTACAT
CGTTTCACCTCGCTGCCAGAATTCTACCGATGTTGGCAGCGACGGTCGTG
GCGGAGATGATTATATTCGGGTATTCCTGGGGTCATCCCCTTAGCATATT
TGCTTTGGGCTCGTTTAAGGCCTTTACCTATTTCTTCATTATCCACACCG
TAAGCTCCAGAGACCCACGATACGGTACAATACTGACCCTAATTAAGGTT
TGCTATACTTCCTGGAGCACAGCTGTCTTGGTGGAAACATTCAGTCTTCT
ATCTGCCAACAGCCCGTTCAACCAATCGTCAGACCTCAAAGCATTCTCAA
ATGTTGTCGCCTCATTGCTTGTGCTTTCTCAAATCACCCAAGTGCTTCCG
AGTAATTTAAAGGGTCGATGGATCCTGTGGGTATTTGGTCTGGCAACAAT
AATCCCATACATCGCAAACATATGGACCATATATATCTCGAACAACGCAA
TCGTCCAAAACCACCCCCTCGCAGAGATAATGGATAAAGCCAGACTCGAA
TTCGAAGAAACCATCCATAAGCAATCTCGCACGTACACAGCTGCATGCGA
TGAGTACCGACGGCGATACAAGATCGAGCCGCCACCAGGATTTGAGGAGT
GGTACCAATATGCATCTGCTCATCAGTCGCCGATAATTGACAATTACGAT
GCCATATACAACAGTATACTACCGATGTTGAAGTTGAGCGGCAAAGCGAT
CAACGAAAACATTAAAAATGCGCGTAACCTGCCGGTAAACGACCTTTGGA
TGTGTACGTTCTTTGGCAGCTCACGCAAAACAAAATGCTCGCATGATTTC
CGCGTGCTTGATCGGGATATTCAACATACATTCGACACCTTACTTGAGAA
TATACCCGCAAATCTACCTGACATTACCTTCCTGGTCAATCATCTCGATG
AGCCAAGGGTGATACACCCACCACCAGACAACATCCACAGCAGTCCAAGC
ATAAAGGACCAGTCCAGACAACCAACATGGGACACTGTATCAGCTCCCTG
CCTTTACCAAACCAATAGAACCCAGACTCAAGACCAACAACCACCATCCC
AAGCCCCCAACCTCCCATTCATCACCGATCCAACACAAGCAAAAAACCTC
TGCCTCCACGCGGAATACAGCACAATGCACGGCATCTTCCTCAGCCCAAC
CTCCTTTCGACCCCTAACCGGTCTCCTCCCGATCCTCTCCCCGGGCTCCC
TCTCCACCATGACCGACATCCTCTACCCCAGCCCGGCCTACCTACAACCC
GACTTCCAATACACCCCCGAAAAGGATATCTCCTGGTCCCAGAAGCAAAA
CACGTTGTACTGGGCCGGCTCTACCACCGGCGCCTTCGCCACAAACAACC
CCAAGAATAGCTGGCACAACTTCCACCGCCAACGCTTCGTGAACCTACTC
ACAAACCCTTCAAACCACCACCACACCTATACCTACCTTCACCAAAACAA
ACATAAGAAAGAAAAAGACACAAACAAAGACACTCCAATAACAACCCGCA
AATCCACCTTCCTCAACACCCGCCTCTACACCATCTCATTCACCCGCATC
TTCAACTGCGATGCCAACCCCTGCCGCGCCCAACGTCGCTACTTCCACCC
GCACTCCTGGGCCGACAAAGACCAGGGCCTACAATCGCGCTTGGTATTCG
ATCTCGATGGGAATGGAATCAGCGGGAGGTTCTATAGCCTTCTGGCGTCG
AATTCTGCGCCTATAAAGCAGACGCTGTTCAGGGAGTGGCATGATGAGAG
GCTGTGGCCGTGGGTGCATTATATCCCTGTGAGTTTGGGGATGGAGGAGA
TGCCGGAGGTGGTGAGGTATTTTACGTCGAGTGAGGAGGGGAGGAAGAGG
GCGGGGGAGATTGCGAGGAGTGGGAAGGAGTGGTTTGGGAGGGCGTTTCG
AGAGGTTGATTTAGGGGTTTGGGTTTGGAGGGTGTTGTTGGAGATGGGGA
GGGTTGGGGATGAGGGGAGGCCTGCTTTGCTGGTGATTGATGAGGAGAGT
GGGGAGGGAGTGTAA back to topCoding sequence (CDS) from alignment at ch4:5557232..5559296+ >KJC3_006396-T1 ID=KJC3_006396-T1|Name=KJC3_006396-T1|organism=Aspergillus niger KJC3|type=CDS|length=3876bp|location=Sequence derived from alignment at ch4:5557232..5559296+ (Aspergillus niger KJC3)
ATGTTGGCAGCGACGGTCGTGGCGGAGATGATTATATTCGGGTATTCCTG
GGGTCATCCCCTTAGCATATTTGCTTTGGGCTCGTTTAAGGCCTTTACCT
ATTTCTTCATTATCCACACCGTTTGCTATACTTCCTGGAGCACAGCTGTC
TTGGTGGAAACATTCAGTCTTCTATCTGCCAACAGCCCGTTCAACCAATC
GTCAGACCTCAAAGCATTCTCAAATGTTGTCGCCTCATTGCTTGTGCTTT
CTCAAATCACCCAAGTGCTTCCGAGTAATTTAAAGGGTCGATGGATCCTG
TGGGTATTTGGTCTGGCAACAATAATCCCATACATCGCAAACATATGGAC
CATATATATCTCGAACAACGCAATCGTCCAAAACCACCCCCTCGCAGAGA
TAATGGATAAAGCCAGACTCGAATTCGAAGAAACCATCCATAAGCAATCT
CGCACGTACACAGCTGCATGCGATGAGTACCGACGGCGATACAAGATCGA
GCCGCCACCAGGATTTGAGGAGTGGTACCAATATGCATCTGCTCATCAGT
CGCCGATAATTGACAATTACGATGCCATATACAACAGTATACTACCGATG
TTGAAGTTGAGCGGCAAAGCGATCAACGAAAACATTAAAAATGCGCGTAA
CCTGCCGGTAAACGACCTTTGGATGTGTACGTTCTTTGGCAGCTCACGCA
AAACAAAATGCTCGCATGATTTCCGCGTGCTTGATCGGGATATTCAACAT
ACATTCGACACCTTACTTGAGAATATACCCGCAAATCTACCTGACATTAC
CTTCCTGGTCAATCATCTCGATGAGCCAAGGGTGATACACCCACCACCAG
ACAACATCCACAGCAGTCCAAGCATAAAGGACCAGTCCAGACAACCAACA
TGGGACACTGTATCAGCTCCCTGCCTTTACCAAACCAATAGAACCCAGAC
TCAAGACCAACAACCACCATCCCAAGCCCCCAACCTCCCATTCATCACCG
ATCCAACACAAGCAAAAAACCTCTGCCTCCACGCGGAATACAGCACAATG
CACGGCATCTTCCTCAGCCCAACCTCCTTTCGACCCCTAACCGGTCTCCT
CCCGATCCTCTCCCCGGGCTCCCTCTCCACCATGACCGACATCCTCTACC
CCAGCCCGGCCTACCTACAACCCGACTTCCAATACACCCCCGAAAAGGAT
ATCTCCTGGTCCCAGAAGCAAAACACGTTGTACTGGGCCGGCTCTACCAC
CGGCGCCTTCGCCACAAACAACCCCAAGAATAGCTGGCACAACTTCCACC
GCCAACGCTTCGTGAACCTACTCACAAACCCTTCAAACCACCACCACACC
TATACCTACCTTCACCAAAACAAACATAAGAAAGAAAAAGACACAAACAA
AGACACTCCAATAACAACCCGCAAATCCACCTTCCTCAACACCCGCCTCT
ACACCATCTCATTCACCCGCATCTTCAACTGCGATGCCAACCCCTGCCGC
GCCCAACGTCGCTACTTCCACCCGCACTCCTGGGCCGACAAAGACCAGGG
CCTACAATCGCGCTTGGTATTCGATCTCGATGGGAATGGAATCAGCGGGA
GGTTCTATAGCCTTCTGGCGTCGAATTCTGCGCCTATAAAGCAGACGCTG
TTCAGGGAGTGGCATGATGAGAGGCTGTGGCCGTGGGTGCATTATATCCC
TGTGAGTTTGGGGATGGAGGAGATGCCGGAGGTGGTGAGGTATTTTACGT
CGAGTGAGGAGGGGAGGAAGAGGGCGGGGGAGATTGCGAGGAGTGGGAAG
GAGTGGTTTGGGAGGGCGTTTCGAGAGGTTGATTTAGGGGTTTGGGTTTG
GAGGGTGTTGTTGGAGATGGGGAGGGTTGGGGATGAGGGGAGGCCTGCTT
TGCTGGTGATTGATGAGGAGAGTGGGGAGGGAGTGTAAATGTTGGCAGCG
ACGGTCGTGGCGGAGATGATTATATTCGGGTATTCCTGGGGTCATCCCCT
TAGCATATTTGCTTTGGGCTCGTTTAAGGCCTTTACCTATTTCTTCATTA
TCCACACCGTTTGCTATACTTCCTGGAGCACAGCTGTCTTGGTGGAAACA
TTCAGTCTTCTATCTGCCAACAGCCCGTTCAACCAATCGTCAGACCTCAA
AGCATTCTCAAATGTTGTCGCCTCATTGCTTGTGCTTTCTCAAATCACCC
AAGTGCTTCCGAGTAATTTAAAGGGTCGATGGATCCTGTGGGTATTTGGT
CTGGCAACAATAATCCCATACATCGCAAACATATGGACCATATATATCTC
GAACAACGCAATCGTCCAAAACCACCCCCTCGCAGAGATAATGGATAAAG
CCAGACTCGAATTCGAAGAAACCATCCATAAGCAATCTCGCACGTACACA
GCTGCATGCGATGAGTACCGACGGCGATACAAGATCGAGCCGCCACCAGG
ATTTGAGGAGTGGTACCAATATGCATCTGCTCATCAGTCGCCGATAATTG
ACAATTACGATGCCATATACAACAGTATACTACCGATGTTGAAGTTGAGC
GGCAAAGCGATCAACGAAAACATTAAAAATGCGCGTAACCTGCCGGTAAA
CGACCTTTGGATGTGTACGTTCTTTGGCAGCTCACGCAAAACAAAATGCT
CGCATGATTTCCGCGTGCTTGATCGGGATATTCAACATACATTCGACACC
TTACTTGAGAATATACCCGCAAATCTACCTGACATTACCTTCCTGGTCAA
TCATCTCGATGAGCCAAGGGTGATACACCCACCACCAGACAACATCCACA
GCAGTCCAAGCATAAAGGACCAGTCCAGACAACCAACATGGGACACTGTA
TCAGCTCCCTGCCTTTACCAAACCAATAGAACCCAGACTCAAGACCAACA
ACCACCATCCCAAGCCCCCAACCTCCCATTCATCACCGATCCAACACAAG
CAAAAAACCTCTGCCTCCACGCGGAATACAGCACAATGCACGGCATCTTC
CTCAGCCCAACCTCCTTTCGACCCCTAACCGGTCTCCTCCCGATCCTCTC
CCCGGGCTCCCTCTCCACCATGACCGACATCCTCTACCCCAGCCCGGCCT
ACCTACAACCCGACTTCCAATACACCCCCGAAAAGGATATCTCCTGGTCC
CAGAAGCAAAACACGTTGTACTGGGCCGGCTCTACCACCGGCGCCTTCGC
CACAAACAACCCCAAGAATAGCTGGCACAACTTCCACCGCCAACGCTTCG
TGAACCTACTCACAAACCCTTCAAACCACCACCACACCTATACCTACCTT
CACCAAAACAAACATAAGAAAGAAAAAGACACAAACAAAGACACTCCAAT
AACAACCCGCAAATCCACCTTCCTCAACACCCGCCTCTACACCATCTCAT
TCACCCGCATCTTCAACTGCGATGCCAACCCCTGCCGCGCCCAACGTCGC
TACTTCCACCCGCACTCCTGGGCCGACAAAGACCAGGGCCTACAATCGCG
CTTGGTATTCGATCTCGATGGGAATGGAATCAGCGGGAGGTTCTATAGCC
TTCTGGCGTCGAATTCTGCGCCTATAAAGCAGACGCTGTTCAGGGAGTGG
CATGATGAGAGGCTGTGGCCGTGGGTGCATTATATCCCTGTGAGTTTGGG
GATGGAGGAGATGCCGGAGGTGGTGAGGTATTTTACGTCGAGTGAGGAGG
GGAGGAAGAGGGCGGGGGAGATTGCGAGGAGTGGGAAGGAGTGGTTTGGG
AGGGCGTTTCGAGAGGTTGATTTAGGGGTTTGGGTTTGGAGGGTGTTGTT
GGAGATGGGGAGGGTTGGGGATGAGGGGAGGCCTGCTTTGCTGGTGATTG
ATGAGGAGAGTGGGGAGGGAGTGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006396-T1.utr5p1 | KJC3_006396-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006598 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5557232..5559296 + |
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