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KJC3_006397-T1, KJC3_006397-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006397-T1
Unique NameKJC3_006397-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5559295..5561091-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006397-T1 ID=KJC3_006397-T1|Name=KJC3_006397-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1797bp|location=Sequence derived from alignment at ch4:5559295..5561091- (Aspergillus niger KJC3)
CAACTATCATGAACTGGAACGCAATCATTTTCTAGGGATGATTGAATCTA
TCGAGATAGTTGCACCCACAACAACGGCGTCGTCCATGACAGAAGTCACA
GCCGACGAACAGCACGCGGCCAGTGTTTCAGGCAATGCAGACAATAATGA
ATTAGCCGGTTCTACGGGCAGGCCGGCAACTACCTTCGACGCGATAACCG
ATCATGTCAGCTTGCGTGGAGAATTTGAGTATTCAAGCGGAGCGAAATTC
TGGCTCCTCATGCTCACCCTGGCTGCTGTCCTGATTTTAAGCAGCATAGA
CATGAACATCGTCGCTACAGCCGTGCCTAGCATTACTGACTATTTCCACA
CTGTTGCAGATGTCGGGTGGTATTCCTCTGCGTTCAGGCTCTGTCAGTGC
TCCTTTCAGTTTGTTTTTGGCAAGGCATACAAGCTCTTCTCTATCAAGGC
CGTCTTTTTGCTTGCCAATGCCATTTCTATAGCAGGTTCGCTGCTCTGCG
GGGCAGCCAGTACGTCGACCATGCTCGTCGTTGGTCGGGCCGTAGCTGGA
CTAGGATCTGCCGGTCTTCTTTCAGGGTGCTTCGTTATCCTCGTGCAATC
CATGCCTTTACACAAACGACCTATGTTCACCGGCATGATGGGTGCCGTCG
AAGGCCTGGCTACGCTATCCGCACCACTTCTCGGCGGAGCCATTGTGCAG
TCTGTTGGCTGGCGATGGTGTTTTTACATCAACGCACCTCTTGGTGCTGC
TACACTGGTATTAACAATGTATTGTTTCTCAGATCCGGCGAAACCCAGCG
ACATTTCCCGCATGGGACTTAAGCAGAAGCTCATGCAACTCGACCTGATA
AGCAACCTACTGTTCATCCCAGCGCTGACGGCCCTATTTCTGGCCTTTTC
ATGGGCCGGTACCAAGTTTTCCTGGGGCAGTGGCCCAGTGATAGGCCCTA
TTATTGCCTTTGCCGTCCTCATGGCCGCCTTTATCTACAATCAAAAACGA
CGAGGAGACGCCGCCGCTCTCCCTTTCCGCATTATGAAACGCCGCAGCGT
TATCGCCGGATGCATATTCATCATGTGCGGTAATAGCACCGGCAACGTTC
TCGAATATTATTTACCTACTTACTATCAAGTCGTACGTGGATATACTCCC
GCCAAAAGCGGCTACATGATGCTCCCTATCATCATCGCCGGCACCATTGG
CGCACTCATCCACGGCTTCGGGACCAGCGCCACTGGCTACTACGCACCGT
TCATGCTTTTCGCCTCAATCATAATGCCCGTCGCCGCGGGCCTCATCACC
ACTATCAAAATCAACACTAGCTTTGCAGAACTGATCACATACACCGCCTT
CTCTGGCCTGGCCTACGGTATCGGCTTCTCTGGACCGCAGAACGCTGTCC
AAACGGTGTTACCCGTGGAGGACGTGCCGCTTGGTACATCTATCATGCTA
TTCGCCCAGTCTTTTGGACCAGCAGTGGCGATCGCAATTGCTCAGGTCCT
ATTCGTAAATCAGCTCTCGATGAATCTAAGTGGTCTCGTGTCAGGCTTGA
ATGGAGCAAGGATCGAAAACAGTGGCCTAACACAAATCGTGACGAGCATG
CCACCGGCCAAGGCTCGAGAAGCCCTCGTGGCTATCGATAAAAGCCTGAT
ACAGACGTGGTATCTGGTGGTGGGACTTGCATGCGCAACGATGGTTGGGA
GCTTGATGATAGAATGGCGGTCGGTGAAATCGAGACGCGACTAGTAGTAG
AACAAAGCAGCAATACCTTACATGACGCCAATTATATATAATCCGTT
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Coding sequence (CDS) from alignment at ch4:5559295..5561091-

>KJC3_006397-T1 ID=KJC3_006397-T1|Name=KJC3_006397-T1|organism=Aspergillus niger KJC3|type=CDS|length=2634bp|location=Sequence derived from alignment at ch4:5559295..5561091- (Aspergillus niger KJC3)
ATCCGGCGAAACCCAGCGACATTTCCCGCATGGGACTTAAGCAGAAGCTC
ATGCAACTCGACCTGATAAGCAACCTACTGTTCATCCCAGCGCTGACGGC
CCTATTTCTGGCCTTTTCATGGGCCGGTACCAAGTTTTCCTGGGGCAGTG
GCCCAGTGATAGGCCCTATTATTGCCTTTGCCGTCCTCATGGCCGCCTTT
ATCTACAATCAAAAACGACGAGGAGACGCCGCCGCTCTCCCTTTCCGCAT
TATGAAACGCCGCAGCGTTATCGCCGGATGCATATTCATCATGTGCGGTA
ATAGCACCGGCAACGTTCTCGAATATTATTTACCTACTTACTATCAAGTC
GTACGTGGATATACTCCCGCCAAAAGCGGCTACATGATGCTCCCTATCAT
CATCGCCGGCACCATTGGCGCACTCATCCACGGCTTCGGGACCAGCGCCA
CTGGCTACTACGCACCGTTCATGCTTTTCGCCTCAATCATAATGCCCGTC
GCCGCGGGCCTCATCACCACTATCAAAATCAACACTAGCTTTGCAGAACT
GATCACATACACCGCCTTCTCTGGCCTGGCCTACGGTATCGGCTTCTCTG
GACCGCAGAACGCTGTCCAAACGGTGTTACCCGTGGAGGACGTGCCGCTT
GGTACATCTATCATGCTATTCGCCCAGTCTTTTGGACCAGCAGTGGCGAT
CGCAATTGCTCAGGTCCTATTCGTAAATCAGCTCTCGATGAATCTAAGTG
GTCTCGTGTCAGGCTTGAATGGAGCAAGGATCGAAAACAGTGGCCTAACA
CAAATCGTGACGAGCATGCCACCGGCCAAGGCTCGAGAAGCCCTCGTGGC
TATCGATAAAAGCCTGATACAGACGTGGTATCTGGTGGTGGGACTTGCAT
GCGCAACGATGGTTGGGAGCTTGATGATAGAATGGCGGTCGGTGAAATCG
AGACGCGACTAGATGATTGAATCTATCGAGATAGTTGCACCCACAACAAC
GGCGTCGTCCATGACAGAAGTCACAGCCGACGAACAGCACGCGGCCAGTG
TTTCAGGCAATGCAGACAATAATGAATTAGCCGGTTCTACGGGCAGGCCG
GCAACTACCTTCGACGCGATAACCGATCATGTCAGCTTGCGTGGAGAATT
TGAGTATTCAAGCGGAGCGAAATTCTGGCTCCTCATGCTCACCCTGGCTG
CTGTCCTGATTTTAAGCAGCATAGACATGAACATCGTCGCTACAGCCGTG
CCTAGCATTACTGACTATTTCCACACTGTTGCAGATGTCGGGTGGTATTC
CTCTGCGTTCAGGCTCTATCCGGCGAAACCCAGCGACATTTCCCGCATGG
GACTTAAGCAGAAGCTCATGCAACTCGACCTGATAAGCAACCTACTGTTC
ATCCCAGCGCTGACGGCCCTATTTCTGGCCTTTTCATGGGCCGGTACCAA
GTTTTCCTGGGGCAGTGGCCCAGTGATAGGCCCTATTATTGCCTTTGCCG
TCCTCATGGCCGCCTTTATCTACAATCAAAAACGACGAGGAGACGCCGCC
GCTCTCCCTTTCCGCATTATGAAACGCCGCAGCGTTATCGCCGGATGCAT
ATTCATCATGTGCGGTAATAGCACCGGCAACGTTCTCGAATATTATTTAC
CTACTTACTATCAAGTCGTACGTGGATATACTCCCGCCAAAAGCGGCTAC
ATGATGCTCCCTATCATCATCGCCGGCACCATTGGCGCACTCATCCACGG
CTTCGGGACCAGCGCCACTGGCTACTACGCACCGTTCATGCTTTTCGCCT
CAATCATAATGCCCGTCGCCGCGGGCCTCATCACCACTATCAAAATCAAC
ACTAGCTTTGCAGAACTGATCACATACACCGCCTTCTCTGGCCTGGCCTA
CGGTATCGGCTTCTCTGGACCGCAGAACGCTGTCCAAACGGTGTTACCCG
TGGAGGACGTGCCGCTTGGTACATCTATCATGCTATTCGCCCAGTCTTTT
GGACCAGCAGTGGCGATCGCAATTGCTCAGGTCCTATTCGTAAATCAGCT
CTCGATGAATCTAAGTGGTCTCGTGTCAGGCTTGAATGGAGCAAGGATCG
AAAACAGTGGCCTAACACAAATCGTGACGAGCATGCCACCGGCCAAGGCT
CGAGAAGCCCTCGTGGCTATCGATAAAAGCCTGATACAGACGTGGTATCT
GGTGGTGGGACTTGCATGCGCAACGATGGTTGGGAGCTTGATGATAGAAT
GGCGGTCGGTGAAATCGAGACGCGACTAGATGATTGAATCTATCGAGATA
GTTGCACCCACAACAACGGCGTCGTCCATGACAGAAGTCACAGCCGACGA
ACAGCACGCGGCCAGTGTTTCAGGCAATGCAGACAATAATGAATTAGCCG
GTTCTACGGGCAGGCCGGCAACTACCTTCGACGCGATAACCGATCATGTC
AGCTTGCGTGGAGAATTTGAGTATTCAAGCGGAGCGAAATTCTGGCTCCT
CATGCTCACCCTGGCTGCTGTCCTGATTTTAAGCAGCATAGACATGAACA
TCGTCGCTACAGCCGTGCCTAGCATTACTGACTATTTCCACACTGTTGCA
GATGTCGGGTGGTATTCCTCTGCGTTCAGGCTCT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006397KJC3_006397Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006397-T1KJC3_006397-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006397-T1.cdsKJC3_006397-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006397-T1.utr3p1KJC3_006397-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006397-T1.exon2KJC3_006397-T1.exon2Aspergillus niger KJC3exon
KJC3_006397-T1.exon1KJC3_006397-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006397-T1.utr5p1KJC3_006397-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5559295..5561091 -
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