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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5561469..5563011+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006398-T1 ID=KJC3_006398-T1|Name=KJC3_006398-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1543bp|location=Sequence derived from alignment at ch4:5561469..5563011+ (Aspergillus niger KJC3)
ATTGGGGACTTTCTTCTGCTCGTACGTAAGTTACAGATGATTGACGGCTA
TGTTGCGCAATGTCAATCCAAGCTGATCCCATCAATCGACGAGCTGATGG
ACCATCTCTCTACTGGTTGTCACCGGTCAGCACTAGTCATCCCGACCAGC
GTGGACCAGAGTGAAGGAATGGGTCCCAATACTTGCAACTGCCCGAATTA
AATCTGCTTGGTCAAGGGTTGCTGCGTAAATGAGTCGAAAGGCTTAGGTT
GGCTGGAAGATAATCCCCATGGCTGCCTAACCCCTCGATCTGGTTAGGGC
GATCTGGCCTCGTGTTGTTGAAGTATCATATTAACTCGCCTATTCCCTAC
GTATGCGGGTGCCCACAACAGCCAATAGGCATTGCAACCAGCATCGCAGA
CTAGGGGTCGCCGCGCCACTGTCATAACTGCCAGGGCCTTATTTCATCAT
CTTGCGGATGAGCGTCATCAGCTGCATCCATCAAATCTTCGATTTCCCGG
GTTCATTGGTTGCGGGTTGTGGTACCATCTTGGTTTCAGGACACGATGAT
ATCATAGGGGGATGGAGCGTCCCGTGGCGACTTTGAATATTGGATACTTG
TGCTGTGTACCTTGTATATAAAAAGGAAAACTTATCGCAACAGTTGGCAA
TTAGTTCGATTCATCTGCAAGATCAGCTTGGTTTAACAATCATCTTGACC
TTTCGAAAGACAAAATCATCTTTCTTCCGAATTATTTCCGCTGAAGGTTA
GTTTGCCTCGCACGATACTGAAACCATGTCTTCTGGCAACGATAACAACG
ACAACCGTAAGTGATATCGGCCTTCGCACCCACTGTTCTTATGTTCTATT
CTCGCCTTGTTTGTGCTTTGACTTAACTAGTCGGTCGCGTTCTGAAGTTC
TCGCACCCCTGGGTACCTAATCCCAACACACCTCGATGCCATGTACACCC
GTTGCTAATATGTAAGTATATAGCCAACCTCGTTGGAGGTCTCGGTGATA
CCCTAGGAAAGACCGTGGGCGGACTCGGAGACACCGTCGGAAGCACTGTG
GGTGGACTCGGACAGACTGTCGGCGGCGCAACCCAGGGTCTAGGCAAGAC
TGTCGGCGGTGCTACTGAAGGCCTGGGCAACACCACCCGGGGCGTCGGAC
AGTCGACTGGAGATATCCTCAGCAGCATCAATGGCGACAGATCGGGTGCG
AATGCTGAGCGCAAGTAAGGATGGCGGCGAGGTCCGGCTGATAATGACAT
GACTTGATGAATATGCTTTGTAATGAAATCGGCGGATGTTAACATTCTTT
TCGCTCCATTGGATATGGCTTGCAATGACTGATTGGATTGTATCTATACG
AGTTGCGTGCTTGTAAAACAAATTGACGTTTTGACAATGAGTATGGAACA
TGAAGCGTAAAGCCTGAACGCGATCGGAACCGAGCGGGAGGGTATTCCGA
GGCATCTGCCGCTCGGATTCAACTCCACTAGGAGAATCTCGCTCCGCTTC
GGAGGGCGGAGCTTTCCGCGGGGAAGTCCCCGTGGCATCTGAC back to topCoding sequence (CDS) from alignment at ch4:5561469..5563011+ >KJC3_006398-T1 ID=KJC3_006398-T1|Name=KJC3_006398-T1|organism=Aspergillus niger KJC3|type=CDS|length=552bp|location=Sequence derived from alignment at ch4:5561469..5563011+ (Aspergillus niger KJC3)
ATGTCTTCTGGCAACGATAACAACGACAACCCCAACCTCGTTGGAGGTCT
CGGTGATACCCTAGGAAAGACCGTGGGCGGACTCGGAGACACCGTCGGAA
GCACTGTGGGTGGACTCGGACAGACTGTCGGCGGCGCAACCCAGGGTCTA
GGCAAGACTGTCGGCGGTGCTACTGAAGGCCTGGGCAACACCACCCGGGG
CGTCGGACAGTCGACTGGAGATATCCTCAGCAGCATCAATGGCGACAGAT
CGGGTGCGAATGCTGAGCGCAAGTAAATGTCTTCTGGCAACGATAACAAC
GACAACCCCAACCTCGTTGGAGGTCTCGGTGATACCCTAGGAAAGACCGT
GGGCGGACTCGGAGACACCGTCGGAAGCACTGTGGGTGGACTCGGACAGA
CTGTCGGCGGCGCAACCCAGGGTCTAGGCAAGACTGTCGGCGGTGCTACT
GAAGGCCTGGGCAACACCACCCGGGGCGTCGGACAGTCGACTGGAGATAT
CCTCAGCAGCATCAATGGCGACAGATCGGGTGCGAATGCTGAGCGCAAGT
AA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006398-T1.utr5p1 | KJC3_006398-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006398-T1.utr3p1 | KJC3_006398-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5561469..5563011 + |
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