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KJC3_006404-T1, KJC3_006404-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006404-T1
Unique NameKJC3_006404-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5578075..5579472+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006404-T1 ID=KJC3_006404-T1|Name=KJC3_006404-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1398bp|location=Sequence derived from alignment at ch4:5578075..5579472+ (Aspergillus niger KJC3)
AGCCCAACCCCGGCGAGAGTCCCGCATCTCCGCCCCTCGGCTGACTCAGC
CCACCGCAGCTCATCACCCCGCGTCTCCTGCCATCCACTGGCTCATTACG
CACTTGGGATGTGCTTTGAAGTCTGATTCTCGTAGGCCTAAACTCCGCGC
CATTGGTAAGACACCCTGCGTGCCTGATGCGCGAAATTTACCCCTCACCG
TGGGATCAATTGGGTGAAGCTTGCTGATCCTCTACAGCTAGGGAAAAACA
AAAGAACCCACTCCAGAAATTTTCCGACCTACCCCGCTACAAGACCAGAA
CACCACCGATCCTAGTCCCTCAATCCTTTTCCAAAATAACGCCCCCCTCT
CCCAATCAACAGAAAGAACAAAAATATTAGAAAGGCCAATATGGACACAC
CCGTGCGCCTTACCGTTCTCATATCCGGCAATGGCTCCAACCTCCAAGCA
GTGATAGACAAGACGCAGCAAGGACAACTCTCGACGCAGATCGTGCGCGT
CATCTCCAATCGCCAGAATGCGTATGGTCTCGAGCGGGCTCGACAGGCCA
ACATCCCCACGCAATACCACAACTTGGTGAAATACAAGAAACAGCACCCT
GCTACACCGGAGGGCATCCAGGCGGCGCGGGAAGAATACGACGCCGAATT
GGCCCGATTGGTACTGGCTGATAAGCCGGAAATGGTGGCTTGTTTGGGAT
TCATGCATGTTTTGTCTCCGAGGTTCTTGGAGCCGTTGGAGGAAGCTAAG
ATTAATATCATTAATCTGCATCCGGCTTTGCCCGGAGCGTTTAATGGGGC
GGTATGTTTATTGTTTGTTTTCTTACGTCCTTCTCTTTTAACTTGTGCCT
CTAAAATTCATCCGTGGGCAAGAAGAAATCATGCTGACGTAATTCTGGGA
TGGGTGGGTGAAATAGAACGCTATCGAGCGTGCGCATGCTGCTTGGTTGG
AAGGGAAAATCGATAAGACGGGTGTTATGATTCATAAGGTCATTTCGGAG
GTGGATATGGGGCAGCCCATTTTGGTCAGAGAGATTCCGTTTGTGAAGGG
GGAGGATGAAGATCTGCATAGATTTGAGCAGAAGGTGCATGAGGTCGAGT
GGGGAGTGGTTATTGAGGGGGTGAAGCTTACGATCCAGGAGGTCCAGGAG
GCAAGGTAGACTTTATTGCTATTACGTGGGCGAGTGTGGCTGGTGGATCA
GTGTTTCTGGCTATGAGTGATGATTGTTACTAACTATTGGGGTCTAAGAT
ACCATATACTACTACGAAATAAATTGAGGCATATAATGTCCCACTGGGAG
TCGATGAACACTACTACTACTAAATGCTTCTCCAGTGATGGACACGCGCT
CTTCATACGAGGACATTTGACGTTTGACATTCCTCATATGGTTGTTGG
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Coding sequence (CDS) from alignment at ch4:5578075..5579472+

>KJC3_006404-T1 ID=KJC3_006404-T1|Name=KJC3_006404-T1|organism=Aspergillus niger KJC3|type=CDS|length=1308bp|location=Sequence derived from alignment at ch4:5578075..5579472+ (Aspergillus niger KJC3)
ATGGACACACCCGTGCGCCTTACCGTTCTCATATCCGGCAATGGCTCCAA
CCTCCAAGCAGTGATAGACAAGACGCAGCAAGGACAACTCTCGACGCAGA
TCGTGCGCGTCATCTCCAATCGCCAGAATGCGTATGGTCTCGAGCGGGCT
CGACAGGCCAACATCCCCACGCAATACCACAACTTGGTGAAATACAAGAA
ACAGCACCCTGCTACACCGGAGGGCATCCAGGCGGCGCGGGAAGAATACG
ACGCCGAATTGGCCCGATTGGTACTGGCTGATAAGCCGGAAATGGTGGCT
TGTTTGGGATTCATGCATGTTTTGTCTCCGAGGTTCTTGGAGCCGTTGGA
GGAAGCTAAGATTAATATCATTAATCTGCATCCGGCTTTGCCCGGAGCGT
TTAATGGGGCGAACGCTATCGAGCGTGCGCATGCTGCTTGGTTGGAAGGG
AAAATCGATAAGACGGGTGTTATGATTCATAAGGTCATTTCGGAGGTGGA
TATGGGGCAGCCCATTTTGGTCAGAGAGATTCCGTTTGTGAAGGGGGAGG
ATGAAGATCTGCATAGATTTGAGCAGAAGGTGCATGAGGTCGAGTGGGGA
GTGGTTATTGAGGGGGTGAAGCTTACGATCCAGGAGGTCCAGGAGGCAAG
GTAGATGGACACACCCGTGCGCCTTACCGTTCTCATATCCGGCAATGGCT
CCAACCTCCAAGCAGTGATAGACAAGACGCAGCAAGGACAACTCTCGACG
CAGATCGTGCGCGTCATCTCCAATCGCCAGAATGCGTATGGTCTCGAGCG
GGCTCGACAGGCCAACATCCCCACGCAATACCACAACTTGGTGAAATACA
AGAAACAGCACCCTGCTACACCGGAGGGCATCCAGGCGGCGCGGGAAGAA
TACGACGCCGAATTGGCCCGATTGGTACTGGCTGATAAGCCGGAAATGGT
GGCTTGTTTGGGATTCATGCATGTTTTGTCTCCGAGGTTCTTGGAGCCGT
TGGAGGAAGCTAAGATTAATATCATTAATCTGCATCCGGCTTTGCCCGGA
GCGTTTAATGGGGCGAACGCTATCGAGCGTGCGCATGCTGCTTGGTTGGA
AGGGAAAATCGATAAGACGGGTGTTATGATTCATAAGGTCATTTCGGAGG
TGGATATGGGGCAGCCCATTTTGGTCAGAGAGATTCCGTTTGTGAAGGGG
GAGGATGAAGATCTGCATAGATTTGAGCAGAAGGTGCATGAGGTCGAGTG
GGGAGTGGTTATTGAGGGGGTGAAGCTTACGATCCAGGAGGTCCAGGAGG
CAAGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016742hydroxymethyl-, formyl- and related transferase activity
GO:0004644phosphoribosylglycinamide formyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006189'de novo' IMP biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006404KJC3_006404Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006404-T1KJC3_006404-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006404-T1.utr5p1KJC3_006404-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_006404-T1.utr5p2KJC3_006404-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006404-T1.exon1KJC3_006404-T1.exon1Aspergillus niger KJC3exon
KJC3_006404-T1.exon2KJC3_006404-T1.exon2Aspergillus niger KJC3exon
KJC3_006404-T1.exon3KJC3_006404-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006404-T1.cdsKJC3_006404-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006404-T1.utr3p1KJC3_006404-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264G7L
DBxrefInterPro:IPR036477
DBxrefInterPro:IPR002376
DBxrefInterPro:IPR004607
DBxrefPFAM:PF00551
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5578075..5579472 +
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