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KJC3_006407-T1, KJC3_006407-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006407-T1
Unique NameKJC3_006407-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5587248..5590859-

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006407-T1 ID=KJC3_006407-T1|Name=KJC3_006407-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3612bp|location=Sequence derived from alignment at ch4:5587248..5590859- (Aspergillus niger KJC3)
CTGCATCCACAATGGGGTGTCGTTATGGCCGGCTCGAAAGCACAAGCGGA
CACTGCAGATATATCATTAGGTCGGAAACGTGCCCAAGATGAGCCAGATC
CAGACCAAGATGCCTCCGAGCATCCCGACCCCATATCCAACAGCGCGTCG
ACAGACCTAGCGCCAAAGAAAAGGCAACGCCGCCAGCCCCCTTTGAAGTC
ACTGGTAGAGACGCCAGAGACGGAAGACAGCGCCAGTGCTAGCTCAACCG
CAGAGAAATCTCGCAAAGGAAAACGCAAACCCGCTCAACCGAAGCGAACT
CCGTCCGCCCCATGGCCCGAGGCGTTCAAGAGCCTCTCCCGGACACACCG
CGCCCTGAACCTCGTGTATACCTTCTGCTGCACGCGAAAGCACTTTGCCA
CCACATTCGGCAACATTAAGAATGCGGTGCAGGCGCAATTGCAAGGTCAA
GAGCTGACAGTGGAGGATGTTGCGCGGGTGAAAGTCCTCGTGCCACGCGC
GGTGCGCTTCGAGTATGTCGATGAAGCCAAGCTGGAGGTCATGACGACTG
GAGAGCGTGAAGCAGCACAAATAGGCTTTGGAAGGGATACACCCGGTGAT
GCGGGCATGCCCACAACAAAGACGCTCCTCTTCGAGCTGCTGGACGGAGA
TTTGAAGAGACAAGTGAGGCATCCGCAGACGGGGGAGCCAACCAAGCCCG
TGCGGCGCATGAAGAACGAGGATCTGAAGATGCCGGTATACAGCCAGAAG
CAGATGCTAGACTTGATCGAGAAGCGAAACAAGAAGTTCACGGATGCAAT
CGATGCCTTTCTCGTCCAGTGCGAAGACGAAGCCGTCGACCCAGTCGAGA
AACTGGAGACGGAAAAGAACGCCTGGATTCCTCAGCAGCCGGAGGAAGAT
ACCACCATCACTGCACCCTCCACTCTCCCACAGCAAATCCCCAAAGAACG
CAAATCTATGTCAGAGATTGTGGAGGAGATCCGCCAAATGGACTGGTACA
CAGCGCAGATCGTTCCCGAAGGACACCGAGTCTTCGACCCCCAGCCAGCC
ATCTACGGCGAACTCACCTTCCCACTCTCCCAGAACCTAGTTAACGCCCT
ATACAACACCAAGAACATCACACAATTCTACTCCCACCAAGCAGAGGCCA
TCAACCACCTCCAAGCCGGCCACCACGTCATCGTATCCACCTCCACCAGC
TCCGGCAAATCCCTCATCTACCAAGTCCCCATGCTGCACGAACTCGAAAA
GGACCCCTCCAGCCGCGGCCTATACATTTTTCCAACCAAAGCCCTAGCAC
AAGACCAACGCCGCAGCATGCAAGAGCTCCTTCAATTCATGGACGGCCTA
CAAGGCACCCTAGTCGAGACCTTCGACGGCGACACTCCAATGCCCAGCCG
CAACCTCATCCGCGACGAAGCCCGCATCATCTTCACCAACCCCGACATGC
TGCACATTACCATTCTCCCCCAAGAAGCCGCCTGGCGGACCTTTCTCCAG
AACCTTAAATTCGTCGTTGTCGACGAACTCCACGTCTACAACGGCCTCTT
CGGCACCCACGTCGCCTTCATCATGCGTCGTCTCCGCCGCATCTGTGCCG
CCGTCGGCAACCACACCGTCCAATTCATCTCCTGCTCCGCCACCGTCGCT
AACCCTTCCCAACACATGCGCGCCATCTTCGGTGTTGACCCCAACTCCAT
CCATCTCATCGACTCCGACGGCTCCCCCTCCGGCCGCAAGGAATTCCTCT
GCTGGAACACCCCCTACAAAGACCCCAACGACCCCTCTTCCGGCCGCGCC
GACAGCGTCACCGAAACAGCCCGCCTCTTCTCCCAACTCATCCTGCGCGG
CGCCCGTGTCATCGCGTTCTGCCGCATCCGCAAGCTCTGCGAAGTCCTTC
TCCAAGCCGTCCGCACCGAACTCACCTCCCTTGAGCGTCCCGAAATCGCC
AACATGGTCATGGGCTACCGCGGCGGCTACAGCCCGCAAGACCGCCGCAA
TATCGAGAAAGACATGTTCGAGGGCCGTCTCCTCGGCATCGTAGCCACCA
ATGCCCTAGAGCTAGGAGTCGACATCGGCTCCCTCGACGCAGTCATCACC
CTGGGCTTTCCCTACTCCATCTCCAATCTCCGCCAACAGAGCGGCCGCGC
CGGCCGACGTAACAAGGACTCCCTGTCTATCCTCGTCGGTGACCGCTACG
CCACAGACCAGCATTACATGCGTAACCCGGACGAACTGTTCACGAAACCA
AACACAGAGCTACAAATCGACCTGTCGAACGACCTCATCCTCGAAGCGCA
TCTCCAATGCGCGGCTTACGAAAAGCCCCTTTCCCTTGCCCTCGACGAAA
CCTACTTCGGTCCTCAGCTCCCTTCCCTCCTAGAAACCCGCCTCCTCCAA
GATAAATACATCCCCTCCCTCTACCACACCCACCCGCGCTTCCTCCCCTC
TCCATCCCGATCCATCGCCATCCGCGATACCGAGGACCAGCACTTCGCCG
TCATAGACACCACAAACGCCCGCAACACCGTCCTCGAAGAAGTCGAGGCC
TCTCGCGCCTTCTTCACCATCTACGAGGGCGGCATCTTCCTCCACCAGGG
GCAGACGTATCTCGTGCACGAACTAAACACATCGATGTACTTCGCCCGCG
TCTCCCGTGTCCATGTGGACTATACGACCCAGCAACGCGATTACACTGAT
ATCGACCCCATCGAGACGGAGAACATCCGTCTGCTTTCTTCCCCCACCAC
ACCCACATCCACCTCATCCTCAGACTCAACCTCTACTTCACAAACCAATA
CCAAAAGTAACCATACCACCGTAAGTAAAGCCTACTTCGGCTCCATCCTC
ATCCACGCCGTGGTGTACGGCTTCTTCAAAATCGACAAACGAGGGCGTAT
CCTCGACGCCGTACCGGTGGACAACAACCCACCGATCGACATCCACACGA
AAGGCATGTGGATCGACATACCCCCGCTAGCTCTGGAAATCCTCCAATCA
AGAAACCTAAACATAGCAGCGGCGATACACGCAGCCGAGCACGCGATCTT
ATCACTCTTACCGACCTTCGTGGTATCTTCGCCCGGGGACGTGCGCACGG
AATGTAAGGTTGCGAAGAAGGAGTTGGGGAGGAAGTTACAAATGGCTGTG
CAAGAGGCAGGAGGGGTAGGTGGGCTGGATAATAAGCAGAAGAAGGAAAA
GTTGCAGAAGATTCTACAGCCCCCTGCGAGACAGCGGCCCGCGAGATTGA
CGTTCTACGATGCCAAGGGGGGAGCCTGTGGGTCGGGGATTGCGGCTAAG
GCGTTTGAGTTTGTGGATGTGTTGTTGGAAAGGGCTGTGAGGCGGATCGA
GGCGTGTGGGTGTGTGATGCCGCAGGGGTGTTTGGAGTGTTGTTGTGATG
AGCGGTGTAAGGAGATGAATGAGGTGATGAGTAAGGCTGGGGCGGGGGTG
GTGCTGAGGTGTTTGCTGGGGTGGGAGGTGGATGTAGATGCTTTGCCGTG
GGGGGAGGAGATGGGGGTGGGAGTTGGAGATGGTGTTGGGGAGTTGAGGG
GGGGTTTGGAGACGGTGGTGCCTGCTGTTGAGGTGCCGGGGAGGGTTGGA
TTATCTAGATAG
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Coding sequence (CDS) from alignment at ch4:5587248..5590859-

>KJC3_006407-T1 ID=KJC3_006407-T1|Name=KJC3_006407-T1|organism=Aspergillus niger KJC3|type=CDS|length=3588bp|location=Sequence derived from alignment at ch4:5587248..5590859- (Aspergillus niger KJC3)
ATGGCCGGCTCGAAAGCACAAGCGGACACTGCAGATATATCATTAGGTCG
GAAACGTGCCCAAGATGAGCCAGATCCAGACCAAGATGCCTCCGAGCATC
CCGACCCCATATCCAACAGCGCGTCGACAGACCTAGCGCCAAAGAAAAGG
CAACGCCGCCAGCCCCCTTTGAAGTCACTGGTAGAGACGCCAGAGACGGA
AGACAGCGCCAGTGCTAGCTCAACCGCAGAGAAATCTCGCAAAGGAAAAC
GCAAACCCGCTCAACCGAAGCGAACTCCGTCCGCCCCATGGCCCGAGGCG
TTCAAGAGCCTCTCCCGGACACACCGCGCCCTGAACCTCGTGTATACCTT
CTGCTGCACGCGAAAGCACTTTGCCACCACATTCGGCAACATTAAGAATG
CGGTGCAGGCGCAATTGCAAGGTCAAGAGCTGACAGTGGAGGATGTTGCG
CGGGTGAAAGTCCTCGTGCCACGCGCGGTGCGCTTCGAGTATGTCGATGA
AGCCAAGCTGGAGGTCATGACGACTGGAGAGCGTGAAGCAGCACAAATAG
GCTTTGGAAGGGATACACCCGGTGATGCGGGCATGCCCACAACAAAGACG
CTCCTCTTCGAGCTGCTGGACGGAGATTTGAAGAGACAAGTGAGGCATCC
GCAGACGGGGGAGCCAACCAAGCCCGTGCGGCGCATGAAGAACGAGGATC
TGAAGATGCCGGTATACAGCCAGAAGCAGATGCTAGACTTGATCGAGAAG
CGAAACAAGAAGTTCACGGATGCAATCGATGCCTTTCTCGTCCAGTGCGA
AGACGAAGCCGTCGACCCAGTCGAGAAACTGGAGACGGAAAAGAACGCCT
GGATTCCTCAGCAGCCGGAGGAAGATACCACCATCACTGCACCCTCCACT
CTCCCACAGCAAATCCCCAAAGAACGCAAATCTATGTCAGAGATTGTGGA
GGAGATCCGCCAAATGGACTGGTACACAGCGCAGATCGTTCCCGAAGGAC
ACCGAGTCTTCGACCCCCAGCCAGCCATCTACGGCGAACTCACCTTCCCA
CTCTCCCAGAACCTAGTTAACGCCCTATACAACACCAAGAACATCACACA
ATTCTACTCCCACCAAGCAGAGGCCATCAACCACCTCCAAGCCGGCCACC
ACGTCATCGTATCCACCTCCACCAGCTCCGGCAAATCCCTCATCTACCAA
GTCCCCATGCTGCACGAACTCGAAAAGGACCCCTCCAGCCGCGGCCTATA
CATTTTTCCAACCAAAGCCCTAGCACAAGACCAACGCCGCAGCATGCAAG
AGCTCCTTCAATTCATGGACGGCCTACAAGGCACCCTAGTCGAGACCTTC
GACGGCGACACTCCAATGCCCAGCCGCAACCTCATCCGCGACGAAGCCCG
CATCATCTTCACCAACCCCGACATGCTGCACATTACCATTCTCCCCCAAG
AAGCCGCCTGGCGGACCTTTCTCCAGAACCTTAAATTCGTCGTTGTCGAC
GAACTCCACGTCTACAACGGCCTCTTCGGCACCCACGTCGCCTTCATCAT
GCGTCGTCTCCGCCGCATCTGTGCCGCCGTCGGCAACCACACCGTCCAAT
TCATCTCCTGCTCCGCCACCGTCGCTAACCCTTCCCAACACATGCGCGCC
ATCTTCGGTGTTGACCCCAACTCCATCCATCTCATCGACTCCGACGGCTC
CCCCTCCGGCCGCAAGGAATTCCTCTGCTGGAACACCCCCTACAAAGACC
CCAACGACCCCTCTTCCGGCCGCGCCGACAGCGTCACCGAAACAGCCCGC
CTCTTCTCCCAACTCATCCTGCGCGGCGCCCGTGTCATCGCGTTCTGCCG
CATCCGCAAGCTCTGCGAAGTCCTTCTCCAAGCCGTCCGCACCGAACTCA
CCTCCCTTGAGCGTCCCGAAATCGCCAACATGGTCATGGGCTACCGCGGC
GGCTACAGCCCGCAAGACCGCCGCAATATCGAGAAAGACATGTTCGAGGG
CCGTCTCCTCGGCATCGTAGCCACCAATGCCCTAGAGCTAGGAGTCGACA
TCGGCTCCCTCGACGCAGTCATCACCCTGGGCTTTCCCTACTCCATCTCC
AATCTCCGCCAACAGAGCGGCCGCGCCGGCCGACGTAACAAGGACTCCCT
GTCTATCCTCGTCGGTGACCGCTACGCCACAGACCAGCATTACATGCGTA
ACCCGGACGAACTGTTCACGAAACCAAACACAGAGCTACAAATCGACCTG
TCGAACGACCTCATCCTCGAAGCGCATCTCCAATGCGCGGCTTACGAAAA
GCCCCTTTCCCTTGCCCTCGACGAAACCTACTTCGGTCCTCAGCTCCCTT
CCCTCCTAGAAACCCGCCTCCTCCAAGATAAATACATCCCCTCCCTCTAC
CACACCCACCCGCGCTTCCTCCCCTCTCCATCCCGATCCATCGCCATCCG
CGATACCGAGGACCAGCACTTCGCCGTCATAGACACCACAAACGCCCGCA
ACACCGTCCTCGAAGAAGTCGAGGCCTCTCGCGCCTTCTTCACCATCTAC
GAGGGCGGCATCTTCCTCCACCAGGGGCAGACGTATCTCGTGCACGAACT
AAACACATCGATGTACTTCGCCCGCGTCTCCCGTGTCCATGTGGACTATA
CGACCCAGCAACGCGATTACACTGATATCGACCCCATCGAGACGGAGAAC
ATCCGTCTGCTTTCTTCCCCCACCACACCCACATCCACCTCATCCTCAGA
CTCAACCTCTACTTCACAAACCAATACCAAAAGTAACCATACCACCGTAA
GTAAAGCCTACTTCGGCTCCATCCTCATCCACGCCGTGGTGTACGGCTTC
TTCAAAATCGACAAACGAGGGCGTATCCTCGACGCCGTACCGGTGGACAA
CAACCCACCGATCGACATCCACACGAAAGGCATGTGGATCGACATACCCC
CGCTAGCTCTGGAAATCCTCCAATCAAGAAACCTAAACATAGCAGCGGCG
ATACACGCAGCCGAGCACGCGATCTTATCACTCTTACCGACCTTCGTGGT
ATCTTCGCCCGGGGACGTGCGCACGGAATGTAAGGTTGCGAAGAAGGAGT
TGGGGAGGAAGTTACAAATGGCTGTGCAAGAGGCAGGAGGGGTAGGTGGG
CTGGATAATAAGCAGAAGAAGGAAAAGTTGCAGAAGATTCTACAGCCCCC
TGCGAGACAGCGGCCCGCGAGATTGACGTTCTACGATGCCAAGGGGGGAG
CCTGTGGGTCGGGGATTGCGGCTAAGGCGTTTGAGTTTGTGGATGTGTTG
TTGGAAAGGGCTGTGAGGCGGATCGAGGCGTGTGGGTGTGTGATGCCGCA
GGGGTGTTTGGAGTGTTGTTGTGATGAGCGGTGTAAGGAGATGAATGAGG
TGATGAGTAAGGCTGGGGCGGGGGTGGTGCTGAGGTGTTTGCTGGGGTGG
GAGGTGGATGTAGATGCTTTGCCGTGGGGGGAGGAGATGGGGGTGGGAGT
TGGAGATGGTGTTGGGGAGTTGAGGGGGGGTTTGGAGACGGTGGTGCCTG
CTGTTGAGGTGCCGGGGAGGGTTGGATTATCTAGATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006407KJC3_006407Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006407-T1.cdsKJC3_006407-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006407-T1.exon1KJC3_006407-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006407-T1.utr5p1KJC3_006407-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006407-T1KJC3_006407-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09260DXP
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR018973
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR014939
DBxrefInterPro:IPR001650
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF09369
DBxrefPFAM:PF00270
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5587248..5590859 -
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