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KJC3_006412-T1, KJC3_006412-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006412-T1
Unique NameKJC3_006412-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5597270..5598855-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006412-T1 ID=KJC3_006412-T1|Name=KJC3_006412-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1586bp|location=Sequence derived from alignment at ch4:5597270..5598855- (Aspergillus niger KJC3)
GTGCCAGCCCAGCTTTCTCCAAATCCGAGTTCCATTGCTAAGTTCCTCGT
ACCTTACCTCGCTTTGCGATTACCATCCTATATTCTCTGGGTACAGCCGG
TCTGTCCAGCCCAGTGCAATCCACTAAGCAGTCCACGTCAGCCGGAGCGG
GCAATGTCCCAGTGACCTATCAGTACTACTTCCGCGACACCCAAACCCAA
CCAACGAAACCACCCAGAGGACAAACACCATGGCCAGCGTACAACCACAC
TACACCCACGGGGACATCCGCGACGATGAATCGATCCTCGACGACGATGT
GATTGAAGCTGATGACGGTATGTGAACTACCTACCTACCTACCTAGCTAG
CTAGCTACCTTCCCTTTGTTTCCGATTCATCCCATACCCCATGTACCTAT
ACATACATCTTTTACTAACATGATGTGTCTAAAATCCCAGCCATCGAAGC
CGACGACCCCCTCCATGACACCTCCGATACCGCCCCCCTCCGTGGAAACA
TCCAGCCCGAAGCCTCGAGCTCCGCTCGCGGCGGCGGAAGCAACTTCTCC
AGCAATTACCTGACGTCCACGATCGGCGGCGAAGACCGCCGCGCGACACA
GAGCACCATCGACGAGACGGTATGGGAGACGCTGTCGCGCGACTTGCGGG
CCGTCTGGGAGAAGATGCGCCAGGTGTTGTGGCCTAAGTATCTCATTGGG
GGCATGTTGCAGCGCGGTGGGGGTGGAATTGGTGCCGCGGAGAGAGGTGA
GGCTACGGGCTTTGGGGGTGGATTGAGGAACATGGTAGGACGCTGGCCGG
ATGCCGATGTTGTGTTGCAGGGTGGGATGAGTGAGGGGTTGAGAGATTGG
GATCTTTGGTGAGTTTCTTTTTACATCTACTGTTGGGTGTGGGGGATGTG
CTAACGGGTGCTTCTAGGGGTCCCTTGATCTTCTGCCTCCTGCTGAGTAT
GTTCTTGTCGATGCGCGCCAAGGATGAGCAGTCGTCGCTGGTGTTCTCGG
GCGTTTTCTCCATCGTGTGGATTGGGGAGGCGGTCGTGACGTTGCAGATT
AAGTTGCTTGGTGGGAATATGTATGTTCTTTACCCAGATTGGTAGATGAA
GGGCAATTGCTAATGTTTTCTTCCGATAGCTCGTTCTTCCAGTCGGTTTG
TATTATCGGATACACGCTCTTCCCTCTGGTCATTGCCTCTCTATTGAGTG
CCTTTGGCCTTCCGACTATTGCGCGCATACCGGTGTATCTCGTGCTGATT
GCGTGGTCGCTGGCGGCGGGCGTGAGTATCCTGGGTGGTTCGGGCGTGTT
GCGCAACCGGGTCGGCATTGCGGTATACCCGCTGTTCGTGTTTTATATTG
CGATCGGGTGTCTCTGCTTTATCAGTTAGAATGGATTGATGGGAAGGGGC
CGATGTCGTAGGCATGGTATCGGTGGGTGAGGGTGTGGCTTGAGACAAGC
TGGAGGTACAAGATGAGGATGATGACGGAGGAGTCAGTCAGTCAGTCAGC
GTGGATTTCTATGTTGTATCAATTCCGGATGATTTCCCATTTGCGATTTG
TATGTTCAGAGCAATAGAACACTGTTCCAATATCTA
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Coding sequence (CDS) from alignment at ch4:5597270..5598855-

>KJC3_006412-T1 ID=KJC3_006412-T1|Name=KJC3_006412-T1|organism=Aspergillus niger KJC3|type=CDS|length=3636bp|location=Sequence derived from alignment at ch4:5597270..5598855- (Aspergillus niger KJC3)
CTCGTTCTTCCAGTCGGTTTGTATTATCGGATACACGCTCTTCCCTCTGG
TCATTGCCTCTCTATTGAGTGCCTTTGGCCTTCCGACTATTGCGCGCATA
CCGGTGTATCTCGTGCTGATTGCGTGGTCGCTGGCGGCGGGCGTGAGTAT
CCTGGGTGGTTCGGGCGTGTTGCGCAACCGGGTCGGCATTGCGGTATACC
CGCTGTTCGTGTTTTATATTGCGATCGGGTGTCTCTGCTTTATCAGTTAG
GGGTCCCTTGATCTTCTGCCTCCTGCTGAGTATGTTCTTGTCGATGCGCG
CCAAGGATGAGCAGTCGTCGCTGGTGTTCTCGGGCGTTTTCTCCATCGTG
TGGATTGGGGAGGCGGTCGTGACGTTGCAGATTAAGTTGCTTGGTGGGAA
TATCCATCGAAGCCGACGACCCCCTCCATGACACCTCCGATACCGCCCCC
CTCCGTGGAAACATCCAGCCCGAAGCCTCGAGCTCCGCTCGCGGCGGCGG
AAGCAACTTCTCCAGCAATTACCTGACGTCCACGATCGGCGGCGAAGACC
GCCGCGCGACACAGAGCACCATCGACGAGACGGTATGGGAGACGCTGTCG
CGCGACTTGCGGGCCGTCTGGGAGAAGATGCGCCAGGTGTTGTGGCCTAA
GTATCTCATTGGGGGCATGTTGCAGCGCGGTGGGGGTGGAATTGGTGCCG
CGGAGAGAGGTGAGGCTACGGGCTTTGGGGGTGGATTGAGGAACATGGTA
GGACGCTGGCCGGATGCCGATGTTGTGTTGCAGGGTGGGATGAGTGAGGG
GTTGAGAGATTGGGATCTTTGATGGCCAGCGTACAACCACACTACACCCA
CGGGGACATCCGCGACGATGAATCGATCCTCGACGACGATGTGATTGAAG
CTGATGACGCTCGTTCTTCCAGTCGGTTTGTATTATCGGATACACGCTCT
TCCCTCTGGTCATTGCCTCTCTATTGAGTGCCTTTGGCCTTCCGACTATT
GCGCGCATACCGGTGTATCTCGTGCTGATTGCGTGGTCGCTGGCGGCGGG
CGTGAGTATCCTGGGTGGTTCGGGCGTGTTGCGCAACCGGGTCGGCATTG
CGGTATACCCGCTGTTCGTGTTTTATATTGCGATCGGGTGTCTCTGCTTT
ATCAGTTAGGGGTCCCTTGATCTTCTGCCTCCTGCTGAGTATGTTCTTGT
CGATGCGCGCCAAGGATGAGCAGTCGTCGCTGGTGTTCTCGGGCGTTTTC
TCCATCGTGTGGATTGGGGAGGCGGTCGTGACGTTGCAGATTAAGTTGCT
TGGTGGGAATATCCATCGAAGCCGACGACCCCCTCCATGACACCTCCGAT
ACCGCCCCCCTCCGTGGAAACATCCAGCCCGAAGCCTCGAGCTCCGCTCG
CGGCGGCGGAAGCAACTTCTCCAGCAATTACCTGACGTCCACGATCGGCG
GCGAAGACCGCCGCGCGACACAGAGCACCATCGACGAGACGGTATGGGAG
ACGCTGTCGCGCGACTTGCGGGCCGTCTGGGAGAAGATGCGCCAGGTGTT
GTGGCCTAAGTATCTCATTGGGGGCATGTTGCAGCGCGGTGGGGGTGGAA
TTGGTGCCGCGGAGAGAGGTGAGGCTACGGGCTTTGGGGGTGGATTGAGG
AACATGGTAGGACGCTGGCCGGATGCCGATGTTGTGTTGCAGGGTGGGAT
GAGTGAGGGGTTGAGAGATTGGGATCTTTGATGGCCAGCGTACAACCACA
CTACACCCACGGGGACATCCGCGACGATGAATCGATCCTCGACGACGATG
TGATTGAAGCTGATGACGCTCGTTCTTCCAGTCGGTTTGTATTATCGGAT
ACACGCTCTTCCCTCTGGTCATTGCCTCTCTATTGAGTGCCTTTGGCCTT
CCGACTATTGCGCGCATACCGGTGTATCTCGTGCTGATTGCGTGGTCGCT
GGCGGCGGGCGTGAGTATCCTGGGTGGTTCGGGCGTGTTGCGCAACCGGG
TCGGCATTGCGGTATACCCGCTGTTCGTGTTTTATATTGCGATCGGGTGT
CTCTGCTTTATCAGTTAGGGGTCCCTTGATCTTCTGCCTCCTGCTGAGTA
TGTTCTTGTCGATGCGCGCCAAGGATGAGCAGTCGTCGCTGGTGTTCTCG
GGCGTTTTCTCCATCGTGTGGATTGGGGAGGCGGTCGTGACGTTGCAGAT
TAAGTTGCTTGGTGGGAATATCCATCGAAGCCGACGACCCCCTCCATGAC
ACCTCCGATACCGCCCCCCTCCGTGGAAACATCCAGCCCGAAGCCTCGAG
CTCCGCTCGCGGCGGCGGAAGCAACTTCTCCAGCAATTACCTGACGTCCA
CGATCGGCGGCGAAGACCGCCGCGCGACACAGAGCACCATCGACGAGACG
GTATGGGAGACGCTGTCGCGCGACTTGCGGGCCGTCTGGGAGAAGATGCG
CCAGGTGTTGTGGCCTAAGTATCTCATTGGGGGCATGTTGCAGCGCGGTG
GGGGTGGAATTGGTGCCGCGGAGAGAGGTGAGGCTACGGGCTTTGGGGGT
GGATTGAGGAACATGGTAGGACGCTGGCCGGATGCCGATGTTGTGTTGCA
GGGTGGGATGAGTGAGGGGTTGAGAGATTGGGATCTTTGATGGCCAGCGT
ACAACCACACTACACCCACGGGGACATCCGCGACGATGAATCGATCCTCG
ACGACGATGTGATTGAAGCTGATGACGCTCGTTCTTCCAGTCGGTTTGTA
TTATCGGATACACGCTCTTCCCTCTGGTCATTGCCTCTCTATTGAGTGCC
TTTGGCCTTCCGACTATTGCGCGCATACCGGTGTATCTCGTGCTGATTGC
GTGGTCGCTGGCGGCGGGCGTGAGTATCCTGGGTGGTTCGGGCGTGTTGC
GCAACCGGGTCGGCATTGCGGTATACCCGCTGTTCGTGTTTTATATTGCG
ATCGGGTGTCTCTGCTTTATCAGTTAGGGGTCCCTTGATCTTCTGCCTCC
TGCTGAGTATGTTCTTGTCGATGCGCGCCAAGGATGAGCAGTCGTCGCTG
GTGTTCTCGGGCGTTTTCTCCATCGTGTGGATTGGGGAGGCGGTCGTGAC
GTTGCAGATTAAGTTGCTTGGTGGGAATATCCATCGAAGCCGACGACCCC
CTCCATGACACCTCCGATACCGCCCCCCTCCGTGGAAACATCCAGCCCGA
AGCCTCGAGCTCCGCTCGCGGCGGCGGAAGCAACTTCTCCAGCAATTACC
TGACGTCCACGATCGGCGGCGAAGACCGCCGCGCGACACAGAGCACCATC
GACGAGACGGTATGGGAGACGCTGTCGCGCGACTTGCGGGCCGTCTGGGA
GAAGATGCGCCAGGTGTTGTGGCCTAAGTATCTCATTGGGGGCATGTTGC
AGCGCGGTGGGGGTGGAATTGGTGCCGCGGAGAGAGGTGAGGCTACGGGC
TTTGGGGGTGGATTGAGGAACATGGTAGGACGCTGGCCGGATGCCGATGT
TGTGTTGCAGGGTGGGATGAGTGAGGGGTTGAGAGATTGGGATCTTTGAT
GGCCAGCGTACAACCACACTACACCCACGGGGACATCCGCGACGATGAAT
CGATCCTCGACGACGATGTGATTGAAGCTGATGACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006412KJC3_006412Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006412-T1KJC3_006412-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006412-T1.cdsKJC3_006412-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006412-T1.utr3p1KJC3_006412-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006412-T1.exon4KJC3_006412-T1.exon4Aspergillus niger KJC3exon
KJC3_006412-T1.exon3KJC3_006412-T1.exon3Aspergillus niger KJC3exon
KJC3_006412-T1.exon2KJC3_006412-T1.exon2Aspergillus niger KJC3exon
KJC3_006412-T1.exon1KJC3_006412-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006412-T1.utr5p1KJC3_006412-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR006977
DBxrefPFAM:PF04893
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5597270..5598855 -
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