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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5604073..5607151- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006414-T1 ID=KJC3_006414-T1|Name=KJC3_006414-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3079bp|location=Sequence derived from alignment at ch4:5604073..5607151- (Aspergillus niger KJC3)
AATCGAACCATTTTTTCCTCCGTCTTGAATTTAGGGTGACTGTGCTACTT
GCGTTGCCACCTAGATCGAGGCATCGTTTTCTTAGCGCTATCGCGGATTT
GACCTGGTGGAATCTTATTTGATTATTACTCGTTTTTGTTCGTCCCGGCC
AAAGAGACTATTTTGGCCCTGCCCTGGCTGCTTTCTAAACCCTCACCACT
CCCCCCCCCTCCCTTTCCCCTCCAACCCAAAGCTTGCCCGAGCGCAGACA
GGACCGTCCCTTTCCATCCTCCCGCGGGTTCCTCGTGCTGTCGTGCGTGC
TTACCGCCACCTGCAAGGCCATTCTCCGTCACCCTAACAGGCGACTAAGG
CAATTAAGCATCACGATCCAGCGCTACTTTTTCCCCCGAAGACCAAATAC
CTCGTCTCGGTTTCCCTGGTCCTTATTTGCGATACATTATTTTTTTACCC
TTCACCATTTTCTTTTCTCATTATACCTACTATTCTTCTTCTTTTCTTCT
TGCGACTCTTTCCGCTCGCGCTCTCTTTCACACTTTGTCAGTGTATTGAA
AAAAAAGAGAGTCCAAAAATCCATACGCGCCAGATCACGCGTTGGTTCTT
TCTTTTCTGTTCCACTTCACTTTCCGTCTCCTTCAACACAACGCGCCCAT
TTCAGGACGTGCAGGACCTGCTGTGGAATTTTCCATTGATCACATCGGTC
TTCTATCCTGAATTCACTAAATAGTACGTTCCAACAAGAAAAAAAAAGAA
ACAAGAAAAAGAGAAGAGGGAGGGAAGAAAAAAAAAGAAAAGAAGAACGA
GGATCTTACCACTCCATCCTGATCTTCCTGCTGTTAGAAAGCAATCTTCT
TTCTCCCCTCCCATTCCATCCACTACGACGTCTCTTTTTCATTTTCCTTT
CTTGTGAAATCACCAAGCTCATTGTGTTCTCTCGACGCGTCTGTATAGGC
TCGCGTGTTTAGTTTTCTTTCTTTTTTGGAGGATTGTCAGGGATCTCTCA
ACCCGTTCGCGGCGAAAATTGTATTATATGGACAACAGACCTGCCTCGGA
GTACGCGCAGTCAGGTTCGCATTATCCATATCCACCGTCTGCTGCGACCC
ATTCTGAACTCCCAGTTGCAGACCAGGCTTCTGCTGCTGCCACTGCTCAA
TACACCCCTCAGACTGAGGTCCGCCCTACTCCTCAGTACACCCCCCAACC
CGAGGTCCGCCCCGCCGCCAATATTTCGTCTTCCAACACGCCGCAGTCAG
ACTACGGTCTGAATCAGCCGCCCGCCGCGCGCTCTCCTGCTTACCACGAG
TACATCGGCCGCCCGCCTCAATACCACCACGCGCCTAACACCCAAGCCGG
TGGAGCGGCAGGTATGGCTCAAGCAACAAGTCCGTCCATACACACCCTCA
GTGATGGGCAGCACCATGACCATCGCAATCACACGAACCTGAAGTCTGAC
GCGGCCGTTCCTATAGATCCCTCAATCGCGGCATCCAGCCCCACCTATCC
TCCTCCCTACTCTCCCTACCAGCCCCAAGGTCACGATATGGCACAATACC
AGGGGCACCCCCCTCCGCCCCCGCCTCAGATGTATACGCGTCCGGAATGG
TCGCATGGGTATGGACAACATCAACACGGTCTGCCTGGACCCTATACCAC
TCCTGCCACAACGGTTGGTCCCGCCTCCCCTGCTGCGACCGCAGGGCCGC
GCCCTGGCCAGGTATGTTTTTGATGATTTTGGCGTCTGTTTCCAAGGGCT
GCGCACTTGCGTTGGTTTGTTGTCTTGGACGTCCCGCGAGGTAAGGTCAG
GGGCTTGCTAGCTACGTAGGCTGCCTCGCGGGACGTAGGAAGCGGCGCGC
TTTTTCATCTGTTTTTGTCACAAAAAGATCCCAGGCTCATCCACATGCTT
TCTCTAGGTATACTCCTTTGTTCCCATTCCTGGCGCGCAGCAGCACAAGC
GGCCCCGTCGTCGGTATGAGGAGATTGAGCGGATGTACAAGTGTGGGTGG
AACGGATGTGAGAAGGCGTATGGTACGCTGAACCATCTGAACGCCCACGT
CACGATGCAGTCTCATGGCGCCAAGCGCACACCCGAAGGTGAGTTTGTTT
GTTGGTCGTCTTTGCGCCTTTTTTTGCAAGTTGGATCCGCCAGCTCTCGC
ATCTGTTGTTTTTGTTGGTCGCGAAACTCTGGATGGGGCTAGTGCGGGTG
GCACGCGCTAGTCGTGTTACACTACCTTAGCGCCGCGGATCGCAGTAGCG
TGACAAGCCGGTGCGGAGGTTAAGCGTCTTCGACGACTCAGTAGCTCCTA
TCTATCTCTTGACTTGTTCCGACCATCCCCTCGTGCTGCTTCTGTCCCAT
CCCCACCATGCATCCTACCCACCAACCCTGTCCCCTTTCAACACACTTCT
TTTCATCATCTGTTTGTTGCATCTCATGCTAATCTCTCCGTCATACAGAA
TTCAAGGAGATTCGCAAAGAGTGGAAAGCTCGAAAGAAGGAGGAAGAGGC
CCAGCGCAAGGCTGCTGAGGAGCGCGAGCGTGCTGCCGCTGCTCAAGCTG
CCCAGGCCAACCAGGTCGACGCACCCAATCCTGCGGATCCCGCTCAGGCT
GGGCAACCACCTGCCTACCCGGGTGGTGTTCGTCCTCAATTACCTCCCAT
TGGATATCAACCTGCCGACGGTCAGGTACCGGGGCAGTACGGAGCTGGAG
CCGGAGGTATGGTGTATCAGGGCAATGGGCAGATGGCATACCCGCCAAAC
TACCCTCACTCCCCTTATGGACAGACCGGTCAAGTGTACCAGCCACGTAA
GTAGTCAGTCCTTTGTTATGTTTGCCTTCTCGGCACCGGGTCATGAGCAA
GTCTCGCATGCGACATGAAAGAAACCACCCCCAAAAAAGAAAGAAAAGAA
GAAACAAAAAGGGACACACGACCACCATACCCGGCTGCAAAAGCTCAAGA
AAAGTTGAGAAGGAGGTCTTCGGATCTATTGCTATAAGGTCTGTAGCTGA
TCGATGACGGCTTCGCAGAAAACCAATCGACCAGCTACCCGCAATAGATG
CCCAGCTTCCCTTACTTCTTTCAGGTTGC back to topCoding sequence (CDS) from alignment at ch4:5604073..5607151- >KJC3_006414-T1 ID=KJC3_006414-T1|Name=KJC3_006414-T1|organism=Aspergillus niger KJC3|type=CDS|length=4776bp|location=Sequence derived from alignment at ch4:5604073..5607151- (Aspergillus niger KJC3)
AAAACCAATCGACCAGCTACCCGCAATAGAATTCAAGGAGATTCGCAAAG
AGTGGAAAGCTCGAAAGAAGGAGGAAGAGGCCCAGCGCAAGGCTGCTGAG
GAGCGCGAGCGTGCTGCCGCTGCTCAAGCTGCCCAGGCCAACCAGGTCGA
CGCACCCAATCCTGCGGATCCCGCTCAGGCTGGGCAACCACCTGCCTACC
CGGGTGGTGTTCGTCCTCAATTACCTCCCATTGGATATCAACCTGCCGAC
GGTCAGGTACCGGGGCAGTACGGAGCTGGAGCCGGAGGTATGGTGTATCA
GGGCAATGGGCAGATGGCATACCCGCCAAACTACCCTCACTCCCCTTATG
GACAGACCGGTCAAGTGTACCAGCCACGTATACTCCTTTGTTCCCATTCC
TGGCGCGCAGCAGCACAAGCGGCCCCGTCGTCGGTATGAGGAGATTGAGC
GGATGTACAAGTGTGGGTGGAACGGATGTGAGAAGGCGTATGGTACGCTG
AACCATCTGAACGCCCACGTCACGATGCAGTCTCATGGCGCCAAGCGCAC
ACCCGAAGATGGACAACAGACCTGCCTCGGAGTACGCGCAGTCAGGTTCG
CATTATCCATATCCACCGTCTGCTGCGACCCATTCTGAACTCCCAGTTGC
AGACCAGGCTTCTGCTGCTGCCACTGCTCAATACACCCCTCAGACTGAGG
TCCGCCCTACTCCTCAGTACACCCCCCAACCCGAGGTCCGCCCCGCCGCC
AATATTTCGTCTTCCAACACGCCGCAGTCAGACTACGGTCTGAATCAGCC
GCCCGCCGCGCGCTCTCCTGCTTACCACGAGTACATCGGCCGCCCGCCTC
AATACCACCACGCGCCTAACACCCAAGCCGGTGGAGCGGCAGGTATGGCT
CAAGCAACAAGTCCGTCCATACACACCCTCAGTGATGGGCAGCACCATGA
CCATCGCAATCACACGAACCTGAAGTCTGACGCGGCCGTTCCTATAGATC
CCTCAATCGCGGCATCCAGCCCCACCTATCCTCCTCCCTACTCTCCCTAC
CAGCCCCAAGGTCACGATATGGCACAATACCAGGGGCACCCCCCTCCGCC
CCCGCCTCAGATGTATACGCGTCCGGAATGGTCGCATGGGTATGGACAAC
ATCAACACGGTCTGCCTGGACCCTATACCACTCCTGCCACAACGAAAACC
AATCGACCAGCTACCCGCAATAGAATTCAAGGAGATTCGCAAAGAGTGGA
AAGCTCGAAAGAAGGAGGAAGAGGCCCAGCGCAAGGCTGCTGAGGAGCGC
GAGCGTGCTGCCGCTGCTCAAGCTGCCCAGGCCAACCAGGTCGACGCACC
CAATCCTGCGGATCCCGCTCAGGCTGGGCAACCACCTGCCTACCCGGGTG
GTGTTCGTCCTCAATTACCTCCCATTGGATATCAACCTGCCGACGGTCAG
GTACCGGGGCAGTACGGAGCTGGAGCCGGAGGTATGGTGTATCAGGGCAA
TGGGCAGATGGCATACCCGCCAAACTACCCTCACTCCCCTTATGGACAGA
CCGGTCAAGTGTACCAGCCACGTATACTCCTTTGTTCCCATTCCTGGCGC
GCAGCAGCACAAGCGGCCCCGTCGTCGGTATGAGGAGATTGAGCGGATGT
ACAAGTGTGGGTGGAACGGATGTGAGAAGGCGTATGGTACGCTGAACCAT
CTGAACGCCCACGTCACGATGCAGTCTCATGGCGCCAAGCGCACACCCGA
AGATGGACAACAGACCTGCCTCGGAGTACGCGCAGTCAGGTTCGCATTAT
CCATATCCACCGTCTGCTGCGACCCATTCTGAACTCCCAGTTGCAGACCA
GGCTTCTGCTGCTGCCACTGCTCAATACACCCCTCAGACTGAGGTCCGCC
CTACTCCTCAGTACACCCCCCAACCCGAGGTCCGCCCCGCCGCCAATATT
TCGTCTTCCAACACGCCGCAGTCAGACTACGGTCTGAATCAGCCGCCCGC
CGCGCGCTCTCCTGCTTACCACGAGTACATCGGCCGCCCGCCTCAATACC
ACCACGCGCCTAACACCCAAGCCGGTGGAGCGGCAGGTATGGCTCAAGCA
ACAAGTCCGTCCATACACACCCTCAGTGATGGGCAGCACCATGACCATCG
CAATCACACGAACCTGAAGTCTGACGCGGCCGTTCCTATAGATCCCTCAA
TCGCGGCATCCAGCCCCACCTATCCTCCTCCCTACTCTCCCTACCAGCCC
CAAGGTCACGATATGGCACAATACCAGGGGCACCCCCCTCCGCCCCCGCC
TCAGATGTATACGCGTCCGGAATGGTCGCATGGGTATGGACAACATCAAC
ACGGTCTGCCTGGACCCTATACCACTCCTGCCACAACGAAAACCAATCGA
CCAGCTACCCGCAATAGAATTCAAGGAGATTCGCAAAGAGTGGAAAGCTC
GAAAGAAGGAGGAAGAGGCCCAGCGCAAGGCTGCTGAGGAGCGCGAGCGT
GCTGCCGCTGCTCAAGCTGCCCAGGCCAACCAGGTCGACGCACCCAATCC
TGCGGATCCCGCTCAGGCTGGGCAACCACCTGCCTACCCGGGTGGTGTTC
GTCCTCAATTACCTCCCATTGGATATCAACCTGCCGACGGTCAGGTACCG
GGGCAGTACGGAGCTGGAGCCGGAGGTATGGTGTATCAGGGCAATGGGCA
GATGGCATACCCGCCAAACTACCCTCACTCCCCTTATGGACAGACCGGTC
AAGTGTACCAGCCACGTATACTCCTTTGTTCCCATTCCTGGCGCGCAGCA
GCACAAGCGGCCCCGTCGTCGGTATGAGGAGATTGAGCGGATGTACAAGT
GTGGGTGGAACGGATGTGAGAAGGCGTATGGTACGCTGAACCATCTGAAC
GCCCACGTCACGATGCAGTCTCATGGCGCCAAGCGCACACCCGAAGATGG
ACAACAGACCTGCCTCGGAGTACGCGCAGTCAGGTTCGCATTATCCATAT
CCACCGTCTGCTGCGACCCATTCTGAACTCCCAGTTGCAGACCAGGCTTC
TGCTGCTGCCACTGCTCAATACACCCCTCAGACTGAGGTCCGCCCTACTC
CTCAGTACACCCCCCAACCCGAGGTCCGCCCCGCCGCCAATATTTCGTCT
TCCAACACGCCGCAGTCAGACTACGGTCTGAATCAGCCGCCCGCCGCGCG
CTCTCCTGCTTACCACGAGTACATCGGCCGCCCGCCTCAATACCACCACG
CGCCTAACACCCAAGCCGGTGGAGCGGCAGGTATGGCTCAAGCAACAAGT
CCGTCCATACACACCCTCAGTGATGGGCAGCACCATGACCATCGCAATCA
CACGAACCTGAAGTCTGACGCGGCCGTTCCTATAGATCCCTCAATCGCGG
CATCCAGCCCCACCTATCCTCCTCCCTACTCTCCCTACCAGCCCCAAGGT
CACGATATGGCACAATACCAGGGGCACCCCCCTCCGCCCCCGCCTCAGAT
GTATACGCGTCCGGAATGGTCGCATGGGTATGGACAACATCAACACGGTC
TGCCTGGACCCTATACCACTCCTGCCACAACGAAAACCAATCGACCAGCT
ACCCGCAATAGAATTCAAGGAGATTCGCAAAGAGTGGAAAGCTCGAAAGA
AGGAGGAAGAGGCCCAGCGCAAGGCTGCTGAGGAGCGCGAGCGTGCTGCC
GCTGCTCAAGCTGCCCAGGCCAACCAGGTCGACGCACCCAATCCTGCGGA
TCCCGCTCAGGCTGGGCAACCACCTGCCTACCCGGGTGGTGTTCGTCCTC
AATTACCTCCCATTGGATATCAACCTGCCGACGGTCAGGTACCGGGGCAG
TACGGAGCTGGAGCCGGAGGTATGGTGTATCAGGGCAATGGGCAGATGGC
ATACCCGCCAAACTACCCTCACTCCCCTTATGGACAGACCGGTCAAGTGT
ACCAGCCACGTATACTCCTTTGTTCCCATTCCTGGCGCGCAGCAGCACAA
GCGGCCCCGTCGTCGGTATGAGGAGATTGAGCGGATGTACAAGTGTGGGT
GGAACGGATGTGAGAAGGCGTATGGTACGCTGAACCATCTGAACGCCCAC
GTCACGATGCAGTCTCATGGCGCCAAGCGCACACCCGAAGATGGACAACA
GACCTGCCTCGGAGTACGCGCAGTCAGGTTCGCATTATCCATATCCACCG
TCTGCTGCGACCCATTCTGAACTCCCAGTTGCAGACCAGGCTTCTGCTGC
TGCCACTGCTCAATACACCCCTCAGACTGAGGTCCGCCCTACTCCTCAGT
ACACCCCCCAACCCGAGGTCCGCCCCGCCGCCAATATTTCGTCTTCCAAC
ACGCCGCAGTCAGACTACGGTCTGAATCAGCCGCCCGCCGCGCGCTCTCC
TGCTTACCACGAGTACATCGGCCGCCCGCCTCAATACCACCACGCGCCTA
ACACCCAAGCCGGTGGAGCGGCAGGTATGGCTCAAGCAACAAGTCCGTCC
ATACACACCCTCAGTGATGGGCAGCACCATGACCATCGCAATCACACGAA
CCTGAAGTCTGACGCGGCCGTTCCTATAGATCCCTCAATCGCGGCATCCA
GCCCCACCTATCCTCCTCCCTACTCTCCCTACCAGCCCCAAGGTCACGAT
ATGGCACAATACCAGGGGCACCCCCCTCCGCCCCCGCCTCAGATGTATAC
GCGTCCGGAATGGTCGCATGGGTATGGACAACATCAACACGGTCTGCCTG
GACCCTATACCACTCCTGCCACAACG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006414-T1.utr3p1 | KJC3_006414-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006414-T1.utr5p1 | KJC3_006414-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013087 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5604073..5607151 - |
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