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KJC3_006416-T1, KJC3_006416-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006416-T1
Unique NameKJC3_006416-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5616377..5617425+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006416-T1 ID=KJC3_006416-T1|Name=KJC3_006416-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1049bp|location=Sequence derived from alignment at ch4:5616377..5617425+ (Aspergillus niger KJC3)
CTTTTTGAAATATACTCGCACCCATTTGAAGTGTTGCTGATGCATTCATG
AAATGCAGACTGCCACTGCAGAGGGCGGTCCCAATTGGGTGGAATACCTG
ACGGGTTGCGGTCTCGAGGAGGGACTCACCTCACCCTTCGACTGCGACCA
ACAGCTATGGGACTTCGCCTTTGCAGGATCAGACATCTCAGTTGAATAGT
ACGCATCTGCAAGCCATACATCATCTTGCATACTTCCTCTAACCCAGTAC
AGCACCCCACTCCACCACAACTTCACCGTCTCGCTTGTCAACCAAGTTAA
GCAATTCAACACCTACGCGCAACCCGTGCTGAAGAAGACCGTAGACCAGT
CACACGCACTAGTAGCCATCTGGATCGGGATCAACGACATCGGCGACAGT
TCGAAATACGATGTCGACTTCCCGACCTTCTACAACGAGCTCATGAATAC
ACTCTTTTCCTCCGTCCAGACTATCTACTCCCAGGGATACCGTTCCTATC
TCTTCATGAACCTTCCCCCGCTGGACCGCAGACCAGGAAACCTAGGCAGC
GCTGATCCCAGTCCCAACGCAACACAAATCACCTGGTACAATGATGCGTT
GGCTCAGCATGCCAGTGCGTTCCATGATCGCTACGCCGACACCAATGTGA
TGTTGTTCGACGCGCATAGCGAACTCAGCTATATTCTGGATAACCCGGGT
GACTTCGGCATTGTGAATATCACGAACTTCTGTGCGGGATATGATCAGCC
GGATATCGCGTGGAATTATCAGGCGTATGGCTGTCCTACGCCGTTGGATA
CTTATTTCTGGTATAATTCGGGGCATATGACGAGCCATGTTCATGAGATC
TTGGCTGGTGCTGTGGAGAGGAAGTTGGAGGAGTGGTCGGATTGAGATGG
GTTATACAGTAAGTTACTACTATGTCACTGGAATATAGGTTTGGTATATA
TAGTCATTTCATGGTGGTAGTGGCTGGCTCTTGGAGACATGGGATTTGAT
AAGTAGTAGTTGAAAGTACAGCACCATTCCATATATATCATCACAACAC
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Coding sequence (CDS) from alignment at ch4:5616377..5617425+

>KJC3_006416-T1 ID=KJC3_006416-T1|Name=KJC3_006416-T1|organism=Aspergillus niger KJC3|type=CDS|length=1578bp|location=Sequence derived from alignment at ch4:5616377..5617425+ (Aspergillus niger KJC3)
ATGCAGACTGCCACTGCAGAGGGCGGTCCCAATTGGGTGGAATACCTGAC
GGGTTGCGGTCTCGAGGAGGGACTCACCTCACCCTTCGACTGCGACCAAC
AGCTATGGGACTTCGCCTTTGCAGGATCAGACATCTCAGTTGAATACACC
CCACTCCACCACAACTTCACCGTCTCGCTTGTCAACCAAGTTAAGCAATT
CAACACCTACGCGCAACCCGTGCTGAAGAAGACCGTAGACCAGTCACACG
CACTAGTAGCCATCTGGATCGGGATCAACGACATCGGCGACAGTTCGAAA
TACGATGTCGACTTCCCGACCTTCTACAACGAGCTCATGAATACACTCTT
TTCCTCCGTCCAGACTATCTACTCCCAGGGATACCGTTCCTATCTCTTCA
TGAACCTTCCCCCGCTGGACCGCAGACCAGGAAACCTAGGCAGCGCTGAT
CCCAGTCCCAACGCAACACAAATCACCTGGTACAATGATGCGTTGGCTCA
GCATGCCAGTGCGTTCCATGATCGCTACGCCGACACCAATGTGATGTTGT
TCGACGCGCATAGCGAACTCAGCTATATTCTGGATAACCCGGGTGACTTC
GGCATTGTGAATATCACGAACTTCTGTGCGGGATATGATCAGCCGGATAT
CGCGTGGAATTATCAGGCGTATGGCTGTCCTACGCCGTTGGATACTTATT
TCTGGTATAATTCGGGGCATATGACGAGCCATGTTCATGAGATCTTGGCT
GGTGCTGTGGAGAGGAAGTTGGAGGAGTGGTCGGATTGAATGCAGACTGC
CACTGCAGAGGGCGGTCCCAATTGGGTGGAATACCTGACGGGTTGCGGTC
TCGAGGAGGGACTCACCTCACCCTTCGACTGCGACCAACAGCTATGGGAC
TTCGCCTTTGCAGGATCAGACATCTCAGTTGAATACACCCCACTCCACCA
CAACTTCACCGTCTCGCTTGTCAACCAAGTTAAGCAATTCAACACCTACG
CGCAACCCGTGCTGAAGAAGACCGTAGACCAGTCACACGCACTAGTAGCC
ATCTGGATCGGGATCAACGACATCGGCGACAGTTCGAAATACGATGTCGA
CTTCCCGACCTTCTACAACGAGCTCATGAATACACTCTTTTCCTCCGTCC
AGACTATCTACTCCCAGGGATACCGTTCCTATCTCTTCATGAACCTTCCC
CCGCTGGACCGCAGACCAGGAAACCTAGGCAGCGCTGATCCCAGTCCCAA
CGCAACACAAATCACCTGGTACAATGATGCGTTGGCTCAGCATGCCAGTG
CGTTCCATGATCGCTACGCCGACACCAATGTGATGTTGTTCGACGCGCAT
AGCGAACTCAGCTATATTCTGGATAACCCGGGTGACTTCGGCATTGTGAA
TATCACGAACTTCTGTGCGGGATATGATCAGCCGGATATCGCGTGGAATT
ATCAGGCGTATGGCTGTCCTACGCCGTTGGATACTTATTTCTGGTATAAT
TCGGGGCATATGACGAGCCATGTTCATGAGATCTTGGCTGGTGCTGTGGA
GAGGAAGTTGGAGGAGTGGTCGGATTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006416KJC3_006416Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006416-T1.utr5p1KJC3_006416-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006416-T1.exon1KJC3_006416-T1.exon1Aspergillus niger KJC3exon
KJC3_006416-T1.exon2KJC3_006416-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006416-T1.cdsKJC3_006416-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006416-T1.utr3p1KJC3_006416-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006416-T1KJC3_006416-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteCAZy:CE16
DBxrefInterPro:IPR036514
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5616377..5617425 +
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