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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5715404..5716342+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006443-T1 ID=KJC3_006443-T1|Name=KJC3_006443-T1|organism=Aspergillus niger KJC3|type=mRNA|length=939bp|location=Sequence derived from alignment at ch4:5715404..5716342+ (Aspergillus niger KJC3)
ACGAAACACTAACACTCAATTAAACCATAGTATACACACAAACCCAATGC
ATCACACCAGCAGCCTCTTATAATAAGAACAATGACAACACTATCCCCCC
TAACCCGCCGCCTCTACAAACTCCCCCACCCCCCAACCCCCCCATCTTCT
TCTTCCCACACCACTCTCCCCTCCTTTCTCGCCCACGCCTCACGCACCTC
CCTTCCCCCTACAAGCACAACCTACATCGGCACCCACTACGAATACACCA
TCCAATCCACCCTCCGCTCCTCTGCCCTCCTCCTCCACCGCACCGGCGGC
CGCTCCGACGCCGGCACAGACCTCGTCGGAACCTGGCATCTCCCCGCACA
CGAGCACCCACCGCGCGTCCTTGTGCAATGCAAGGCGCTCAAGACGAAGC
TTGGGCCCAATATCGTCCGTGAGCTCGAGGGGACGTTCTCGTCGGCGCCG
GTGGGGTGGCGCGGGACAGGCGTCATCGGGATGCTGGTTAGTCCCAGGGA
GGCGACGAGGGGCGTGCGGGAGGCGTTGACTAGGAGTCGGTTTCCGTTAG
TTTGGTGTCTTGTTGGGTTAGAGGGGAGAGTTAGGCAGGTGCTTTGGAAC
GAGAGGGTCGAGGGGGTCGTCGGGGGTGGGTTGGGGATTGGGGTTGTTTA
TTGTGCGAATGAGCAGGGGGATAACAGGGATGCGGAGGCGAGGGTGACGT
GGGATGGGGAAGAAGTGCCTGGCATAGATGATGTGGTGGAGAGGATGGAG
GTTATGCAGAGGAGGTGGTTTGAGTTGTGGGATGTTGGGGAGGAGAGGTG
GGAGGAGGTGCTGGGGGTCGTGGAACGGTTGTTTCCGTTTGAGAAGCCAT
TGCTGTATGCTAGGGACGGGAGGGTGAGTGGGTTGAGTGATGAGGAGAGG
GAGCTTGTGAGGAGAGAGTTGAAGAGTAGGTCTACTTGA back to topCoding sequence (CDS) from alignment at ch4:5715404..5716342+ >KJC3_006443-T1 ID=KJC3_006443-T1|Name=KJC3_006443-T1|organism=Aspergillus niger KJC3|type=CDS|length=858bp|location=Sequence derived from alignment at ch4:5715404..5716342+ (Aspergillus niger KJC3)
ATGACAACACTATCCCCCCTAACCCGCCGCCTCTACAAACTCCCCCACCC
CCCAACCCCCCCATCTTCTTCTTCCCACACCACTCTCCCCTCCTTTCTCG
CCCACGCCTCACGCACCTCCCTTCCCCCTACAAGCACAACCTACATCGGC
ACCCACTACGAATACACCATCCAATCCACCCTCCGCTCCTCTGCCCTCCT
CCTCCACCGCACCGGCGGCCGCTCCGACGCCGGCACAGACCTCGTCGGAA
CCTGGCATCTCCCCGCACACGAGCACCCACCGCGCGTCCTTGTGCAATGC
AAGGCGCTCAAGACGAAGCTTGGGCCCAATATCGTCCGTGAGCTCGAGGG
GACGTTCTCGTCGGCGCCGGTGGGGTGGCGCGGGACAGGCGTCATCGGGA
TGCTGGTTAGTCCCAGGGAGGCGACGAGGGGCGTGCGGGAGGCGTTGACT
AGGAGTCGGTTTCCGTTAGTTTGGTGTCTTGTTGGGTTAGAGGGGAGAGT
TAGGCAGGTGCTTTGGAACGAGAGGGTCGAGGGGGTCGTCGGGGGTGGGT
TGGGGATTGGGGTTGTTTATTGTGCGAATGAGCAGGGGGATAACAGGGAT
GCGGAGGCGAGGGTGACGTGGGATGGGGAAGAAGTGCCTGGCATAGATGA
TGTGGTGGAGAGGATGGAGGTTATGCAGAGGAGGTGGTTTGAGTTGTGGG
ATGTTGGGGAGGAGAGGTGGGAGGAGGTGCTGGGGGTCGTGGAACGGTTG
TTTCCGTTTGAGAAGCCATTGCTGTATGCTAGGGACGGGAGGGTGAGTGG
GTTGAGTGATGAGGAGAGGGAGCTTGTGAGGAGAGAGTTGAAGAGTAGGT
CTACTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006443-T1.utr5p1 | KJC3_006443-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264YIJ |
| DBxref | InterPro:IPR018828 |
| DBxref | PFAM:PF04471 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5715404..5716342 + |
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