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KJC3_006458-T1, KJC3_006458-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006458-T1
Unique NameKJC3_006458-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5762618..5765384-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006458-T1 ID=KJC3_006458-T1|Name=KJC3_006458-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2767bp|location=Sequence derived from alignment at ch4:5762618..5765384- (Aspergillus niger KJC3)
CGCGAACGATATATATAGAGGTTCTAATTTGGCGTGAGAGGCTTAACTAG
AGCACCCTACGAGTGAAGGCACCATCATCAAAGTCTCACCTTTACCTCCA
ACTTACGCTATACTATTGACCCTCCACCACTCCGCGCAAGACTTGCGGCA
ATCCTCAGCGAAGAAGTCGCAGGTTACCGACCTACCAATCGACCAGCTAA
CCCAATCCTCACCTCAAAGCCATAACAACTCCACAAAATGGCCGCCCAAC
GCCAGGCCTCCTCCGCCTCCCAAACGCCCCTCATCTCCCCAGCAGAGCTT
TCCTACCTCTACACATCACTATCTCTCCCAGACGGCCCTATCCGCCCCGA
TGGCCGCTCGCCCACGCAATTCCGCCCATTGACCGCAGAAACAGACATTC
TGCCGGGCACCAACGGTAGCGCGCGCGTTGGGTTCGCCGACGGTACGCAA
GCCATCGTGGGTGTGAAGGCTGAGGTGGAAAAGACCGTTGTTGCGGCCGA
AGCACTGAATCTATCGCAAAAAACGCAGGAAGATTACGCCGATAATGAAG
GCGGAGAGGGCCAGAAAACATCCAGTCATGGCCATGGCTCGTGGGTGCAG
ATGTCTATTGAGATCCCGGGTTTTCGGGATGATGATGCCCTCCCGGTTTT
CTTGTCGGAGATGATGCGCGAGCCGCTTGTTGAGTCGGTCGCTGGAGGCG
ATGGAAAGGGTGAGGATGAGATGGCTGGGGGGTTGAAGGGGAGGTTGGTT
ATTAATAAGAGGTGGCATTGGAGGTTGTATATTGATGTGAGTGATTGCTT
CTTTTCTGGTCGAGGGGGTAGGGGTGAGTGGTGCTAATGGTGTTCGTACA
GGTGCTGCTGCTGTCGCAGCCTCTGTCGTATCCGCTGCCGTTGCTGTCTT
TGACGACTCATTTGGCTCTTTTGTCGACTAAGCTGCCTAAGCTCAAGTCC
AAGGGAGAAGAAGATCCCTTCTTCGATGATGATTGGAATGCCGCTGAATA
TCTATACCCCCGCTCGCAGTCTGGGCCTCGCCTATCTTCTACGAAGCAGG
TCCGGCCTCCTGTGACGCTGCTTGTTATTTCCGTGGGCGATAATGTCATC
TTTGATCCTAACAGGGAGGAAATCACTGTCGCGGATACTGTTCTGGCTGT
TTCTATCACCCAGGATAGTGACTCGGATGGTCTGAAGCTACTTTCTATTC
GCACAGTCGACCCTCCGTCCCGTCTTACGCAGCCGGGTGTGTCGAACTCG
GAGAATGTGGCGACACTGGGTTCCACAGCAGCTGCGGAAGAGGCGGCCAT
GACGGATCCGTCTACTGGCGAAGAGGTCGCGGGCGTTTGGAGACCCCGAC
GGGGCGGTGTCAAACGGCGCACGATTGCAAAGATGCTCAAGCTGGTCTTG
CAGAAGGGAGGTGTTGGTGAAGAGGTCCTTGAGGGTCTTGAGGGAGTCCA
GGTGGGCTGATCAATTGGTTGAACGAATGGTTGAAAATATTGCCTCAGCT
GTGGATAGAATCATGGAGGGCATAATGCACCCGCGCACCACCGCAAGAGT
GGACTATATGGGATAGCAGTCCGACGCTATCTACCCTATCTCTGATACCG
ATTCCAGGAACAAGCGGTGGTCCTCTGAAGAGAAATTAGACAGGTACATT
AGACACAATAATACCGATCTACTACCTCGTGCTGTGAGGGAGGAGGGATT
CAAGGACAGAAGCATGTCCAGCATGCCAATGATACTCCATTCTATCCGAG
CTTCCACAGCGCATTCACACTATTAGATCTCAGTATTTGTAACAGATAGT
TCTCAAACACCAATCCGGAAGCTATCCATGTACATCTCTCTCCAAATTCG
TAGGCCATGCATTCAGACTTCACCCACTGTTCACATGTATACACAGACAA
TACCGCCAGCGGCATCAACTCAACGCCTCCCCACCCCATTACCAAACATA
ATGTACAGGAAAAGTCTACATCATCATCTCCCCCTCCATCATCCTCTTTT
TCGGATTCCTCGGCTGCGTCTCTTGCCTCCTCCTCTCCTCCTCACTCGGC
TCAACATCCGTCTTCACCCCCTCCAACGCGCTCCTCACCTCCTCTTCCCT
CTTCTCCTTCTCATGTCCCTCAACCGCAACCTCCAAAATCTCTCTCTCCA
AGCCCGGCACAACCTCCCACTCCACCCCGGCCTCCTCCAACCTCCTCACC
CCCTCCGACTCCCCCACAAACGTCCCGGGCTCCTTCACCCCGAAATACAC
CTTCTGAATGCCCCGTCCCTCCCCACCTTGTCTCGTATTGATGATTCTCT
CCACGCACGGCGCATTGCCCGAGAGTCTCTTCCCGCAGGGCTCCATGGTC
ACGTACATGACAAGCTTCCTCTCAGGGTCATTGTGGGGAAGGACAGTGTG
GACTTGCTCGTCGGGCACGCCGTGCACGGAGGCATAGTTGGATAGGCAGC
ATTGTTCGGCGTGCGTGTTACCGGCTAATTCCATTGTGTAGCCGGTTGAG
AGGAGGATGTCGGAGGAGTAGGTGGGTGTGGTGTCGGTTGTGCTGCGGCT
GAGGAGGAGGGCGCCGACGCGGAAGTTGGTTGGGAGGGCGGGGGCTTTGC
GGGCGAGGGCGAGGCATTGAGTCATGTAGTGGAGGTGGGGGGTGCTGGGG
ATGCCCTTCTTGTTGGGGTCTGTGGTGGTGGTCATTTTTGTGGTTGTGTT
GGGAGTTGAGTTTGGTATTGTAGAATGTGTTACTGTGTAGAGAGACAGGG
AGGGGAATAAGTGATAG
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Coding sequence (CDS) from alignment at ch4:5762618..5765384-

>KJC3_006458-T1 ID=KJC3_006458-T1|Name=KJC3_006458-T1|organism=Aspergillus niger KJC3|type=CDS|length=2316bp|location=Sequence derived from alignment at ch4:5762618..5765384- (Aspergillus niger KJC3)
GTGCTGCTGCTGTCGCAGCCTCTGTCGTATCCGCTGCCGTTGCTGTCTTT
GACGACTCATTTGGCTCTTTTGTCGACTAAGCTGCCTAAGCTCAAGTCCA
AGGGAGAAGAAGATCCCTTCTTCGATGATGATTGGAATGCCGCTGAATAT
CTATACCCCCGCTCGCAGTCTGGGCCTCGCCTATCTTCTACGAAGCAGGT
CCGGCCTCCTGTGACGCTGCTTGTTATTTCCGTGGGCGATAATGTCATCT
TTGATCCTAACAGGGAGGAAATCACTGTCGCGGATACTGTTCTGGCTGTT
TCTATCACCCAGGATAGTGACTCGGATGGTCTGAAGCTACTTTCTATTCG
CACAGTCGACCCTCCGTCCCGTCTTACGCAGCCGGGTGTGTCGAACTCGG
AGAATGTGGCGACACTGGGTTCCACAGCAGCTGCGGAAGAGGCGGCCATG
ACGGATCCGTCTACTGGCGAAGAGGTCGCGGGCGTTTGGAGACCCCGACG
GGGCGGTGTCAAACGGCGCACGATTGCAAAGATGCTCAAGCTGGTCTTGC
AGAAGGGAGGTGTTGGTGAAGAGGTCCTTGAGGGTCTTGAGGGAGTCCAG
GTGGGCTGAATGGCCGCCCAACGCCAGGCCTCCTCCGCCTCCCAAACGCC
CCTCATCTCCCCAGCAGAGCTTTCCTACCTCTACACATCACTATCTCTCC
CAGACGGCCCTATCCGCCCCGATGGCCGCTCGCCCACGCAATTCCGCCCA
TTGACCGCAGAAACAGACATTCTGCCGGGCACCAACGGTAGCGCGCGCGT
TGGGTTCGCCGACGGTACGCAAGCCATCGTGGGTGTGAAGGCTGAGGTGG
AAAAGACCGTTGTTGCGGCCGAAGCACTGAATCTATCGCAAAAAACGCAG
GAAGATTACGCCGATAATGAAGGCGGAGAGGGCCAGAAAACATCCAGTCA
TGGCCATGGCTCGTGGGTGCAGATGTCTATTGAGATCCCGGGTTTTCGGG
ATGATGATGCCCTCCCGGTTTTCTTGTCGGAGATGATGCGCGAGCCGCTT
GTTGAGTCGGTCGCTGGAGGCGATGGAAAGGGTGAGGATGAGATGGCTGG
GGGGTTGAAGGGGAGGTTGGTTATTAATAAGAGGTGGCATTGGAGGTTGT
ATATTGATGTGCTGCTGCTGTCGCAGCCTCTGTCGTATCCGCTGCCGTTG
CTGTCTTTGACGACTCATTTGGCTCTTTTGTCGACTAAGCTGCCTAAGCT
CAAGTCCAAGGGAGAAGAAGATCCCTTCTTCGATGATGATTGGAATGCCG
CTGAATATCTATACCCCCGCTCGCAGTCTGGGCCTCGCCTATCTTCTACG
AAGCAGGTCCGGCCTCCTGTGACGCTGCTTGTTATTTCCGTGGGCGATAA
TGTCATCTTTGATCCTAACAGGGAGGAAATCACTGTCGCGGATACTGTTC
TGGCTGTTTCTATCACCCAGGATAGTGACTCGGATGGTCTGAAGCTACTT
TCTATTCGCACAGTCGACCCTCCGTCCCGTCTTACGCAGCCGGGTGTGTC
GAACTCGGAGAATGTGGCGACACTGGGTTCCACAGCAGCTGCGGAAGAGG
CGGCCATGACGGATCCGTCTACTGGCGAAGAGGTCGCGGGCGTTTGGAGA
CCCCGACGGGGCGGTGTCAAACGGCGCACGATTGCAAAGATGCTCAAGCT
GGTCTTGCAGAAGGGAGGTGTTGGTGAAGAGGTCCTTGAGGGTCTTGAGG
GAGTCCAGGTGGGCTGAATGGCCGCCCAACGCCAGGCCTCCTCCGCCTCC
CAAACGCCCCTCATCTCCCCAGCAGAGCTTTCCTACCTCTACACATCACT
ATCTCTCCCAGACGGCCCTATCCGCCCCGATGGCCGCTCGCCCACGCAAT
TCCGCCCATTGACCGCAGAAACAGACATTCTGCCGGGCACCAACGGTAGC
GCGCGCGTTGGGTTCGCCGACGGTACGCAAGCCATCGTGGGTGTGAAGGC
TGAGGTGGAAAAGACCGTTGTTGCGGCCGAAGCACTGAATCTATCGCAAA
AAACGCAGGAAGATTACGCCGATAATGAAGGCGGAGAGGGCCAGAAAACA
TCCAGTCATGGCCATGGCTCGTGGGTGCAGATGTCTATTGAGATCCCGGG
TTTTCGGGATGATGATGCCCTCCCGGTTTTCTTGTCGGAGATGATGCGCG
AGCCGCTTGTTGAGTCGGTCGCTGGAGGCGATGGAAAGGGTGAGGATGAG
ATGGCTGGGGGGTTGAAGGGGAGGTTGGTTATTAATAAGAGGTGGCATTG
GAGGTTGTATATTGAT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006458KJC3_006458Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006458-T1KJC3_006458-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006458-T1.cdsKJC3_006458-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006458-T1.utr3p1KJC3_006458-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006458-T1.exon2KJC3_006458-T1.exon2Aspergillus niger KJC3exon
KJC3_006458-T1.exon1KJC3_006458-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006458-T1.utr5p1KJC3_006458-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR020568
DBxrefInterPro:IPR001247
DBxrefPFAM:PF01138
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5762618..5765384 -
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