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KJC3_006460-T1, KJC3_006460-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006460-T1
Unique NameKJC3_006460-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5775941..5777982+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006460-T1 ID=KJC3_006460-T1|Name=KJC3_006460-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2042bp|location=Sequence derived from alignment at ch4:5775941..5777982+ (Aspergillus niger KJC3)
TCATCTTTGAGATTGTCTGTGCAGTCAGTGCATGCTACGTCATTGTGCCC
AGCTTCATTTTCACATTAGTTAACATACTTCGTAGTGATTCGTGACTCAA
TGACACTTTCAGCCAAAGCCAGGTAGTGAGGTAGCCAGGAGAGTAACAAT
ATCTGCCTACCGGGCTGATGAGAAACAAGCCACCAGCGATGCAAACGAGC
TCACAAAAGCGCCGAGACATGCGTTTGACACTGTCAGCAAACCGTTTGCA
AGACATCTCATCTCTGACCACCGTCTATCTATCTGTATGACACAGTCATG
AGAATCAACCTCTGAGGGGCAGATGTGTGTTTCTGACCAGCCCAACTTGG
ATAAATGACAGTTACAGCGCAAAATGAGAGAAACATGGCGTTTTCCGTAC
TCAACAATACAATCAGCCTCCCGTGTAGTCCGACCAGGTATTGACTTCCT
CTTCGGACGGAACTTGCCACTCAGGCTTCAGGATGTTGTCTACAAACCTC
GACTATTAACTTCTCCTTCACCAAGTGTCTCGCGTCACTAACAGGTGGCT
GGCGCCTAGATGCTCTTCGAATACATTCGCAGGCAGTTCCCTCCGTCTGC
ATTCACCGTCTCACTAACACTGTTCACTGGAGCTTACGTTGCCTGGGCAG
GATGCCATAGTGATAGATTCTTCTGAGAGCCTATAAAGTTGCCTGGAACG
TGTTTCCTCTGTTTCTCCTTCGTTTCAACTCGCGTCTTCGACATCGTGGT
TTGTATCCAGCTGGTCTGAGGCAACTTCATCGTCCTCCTGATTAGTCGTT
CCCCCCGGATAGCTCTCACCATGGGCCCATCCAGACGGGCCACTGTGGTC
CCAAACGCCTTTGCCGGTGGCTATAGCCAGACAGTCAGAAACCGGTCAGT
TTTCTGCTGGATACGCTGCAGATCGGTCTCGCTGACGATACTATAGGCTT
GACAAGGTTGTTTTCCCGGATAGGTGTGTCTACTACTTCACTCTTCAACA
TGTCAATATTACTTTGTTCTACATCTGACATGATCGTAGAATCAAATGCG
GAACATGCAAGAAGTTTCGGTACATCGGCACTTTCTCTAACAGACAACTG
GACATTCTACGCCATGCGGTAGTGGCTGAGGGAGCTTCGGCTGCTACCAG
CGGACGTGCTAGATGCAGACAGTGCACCGGTCCAGGAAATACTGAATTGA
AATGCACACAGTGTGACCGCGTCAAATCGATCGAAGAGTTCGCGAAGAAC
CAGCGGCACGAGCGTGATACTGCGGTATGCTTACTCAATTTAATCGCGGT
GGATTTCAGCTGGGCTAATTTCAGGGCAGCGTTGCATGAACTGTGTCCAG
AAACATACGGAAACTGAACCCTTGATGGATGAAATTAAGCAGATCACCGG
AGGCGATGATACTACTGCTAGCTCTGTTACTGTTGGGAATCCCCATGATC
TCTACTACTATATCAATATAGTTTAGTTGCGACGTACTGACAAGCTCGAA
GAGTCAGGCAGGTAGTAGCTCTTTGGCTACTTCGTTGAAGCGTCTCCAAC
TGAGCGGTGCTCATGAGGGATCTGTTTGCAGTGACGATCTGGATGACGAT
GACGATTTGTCCATTGGTGGTGGTGTCTTTTTGGAGCCTAGACACACCGA
CGAGAATAGCAGCACCAATAACAAGGGCAAGGAGAAGGTCTTCACCGGCT
ACGATCCTCAGGGAAACCCGCATGTACTCACCCACCGCGCAGAGGTTACG
CAGTCCTACCAGAGCGAATGGTCTGTCTGGGGAGTTAAGAACAAAGCCCT
TCGAAGTGAAGCCGGTCCCGCCAGATCAACGCCGAAGAGGGAAAGAAACT
TCGCCAAAGTCCCGGTAAGTGCCACCGACTTTGCATATTTACGAAGAACC
GATATTGATGACGATTGATTCTACGCAGAGCGCGCGCTATGAAAAGCACG
AACTGCCGACCATGGCCATTCCTGATTCCAGTGGCGCGAACATCCCTTCT
GACGATGAGGACGAAGTGAACGATTTGGACGTCTTTCTGTGA
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Coding sequence (CDS) from alignment at ch4:5775941..5777982+

>KJC3_006460-T1 ID=KJC3_006460-T1|Name=KJC3_006460-T1|organism=Aspergillus niger KJC3|type=CDS|length=5490bp|location=Sequence derived from alignment at ch4:5775941..5777982+ (Aspergillus niger KJC3)
ATGGGCCCATCCAGACGGGCCACTGTGGTCCCAAACGCCTTTGCCGGTGG
CTATAGCCAGACAGTCAGAAACCGGCTTGACAAGGTTGTTTTCCCGGATA
GAATCAAATGCGGAACATGCAAGAAGTTTCGGTACATCGGCACTTTCTCT
AACAGACAACTGGACATTCTACGCCATGCGGTAGTGGCTGAGGGAGCTTC
GGCTGCTACCAGCGGACGTGCTAGATGCAGACAGTGCACCGGTCCAGGAA
ATACTGAATTGAAATGCACACAGTGTGACCGCGTCAAATCGATCGAAGAG
TTCGCGAAGAACCAGCGGCACGAGCGTGATACTGCGCGTTGCATGAACTG
TGTCCAGAAACATACGGAAACTGAACCCTTGATGGATGAAATTAAGCAGA
TCACCGGAGGCGATGATACTACTGCTAGCTCTGTTACTAGTCAGGCAGGT
AGTAGCTCTTTGGCTACTTCGTTGAAGCGTCTCCAACTGAGCGGTGCTCA
TGAGGGATCTGTTTGCAGTGACGATCTGGATGACGATGACGATTTGTCCA
TTGGTGGTGGTGTCTTTTTGGAGCCTAGACACACCGACGAGAATAGCAGC
ACCAATAACAAGGGCAAGGAGAAGGTCTTCACCGGCTACGATCCTCAGGG
AAACCCGCATGTACTCACCCACCGCGCAGAGGTTACGCAGTCCTACCAGA
GCGAATGGTCTGTCTGGGGAGTTAAGAACAAAGCCCTTCGAAGTGAAGCC
GGTCCCGCCAGATCAACGCCGAAGAGGGAAAGAAACTTCGCCAAAGTCCC
GAGCGCGCGCTATGAAAAGCACGAACTGCCGACCATGGCCATTCCTGATT
CCAGTGGCGCGAACATCCCTTCTGACGATGAGGACGAAGTGAACGATTTG
GACGTCTTTCTGTGAATGGGCCCATCCAGACGGGCCACTGTGGTCCCAAA
CGCCTTTGCCGGTGGCTATAGCCAGACAGTCAGAAACCGGCTTGACAAGG
TTGTTTTCCCGGATAGAATCAAATGCGGAACATGCAAGAAGTTTCGGTAC
ATCGGCACTTTCTCTAACAGACAACTGGACATTCTACGCCATGCGGTAGT
GGCTGAGGGAGCTTCGGCTGCTACCAGCGGACGTGCTAGATGCAGACAGT
GCACCGGTCCAGGAAATACTGAATTGAAATGCACACAGTGTGACCGCGTC
AAATCGATCGAAGAGTTCGCGAAGAACCAGCGGCACGAGCGTGATACTGC
GCGTTGCATGAACTGTGTCCAGAAACATACGGAAACTGAACCCTTGATGG
ATGAAATTAAGCAGATCACCGGAGGCGATGATACTACTGCTAGCTCTGTT
ACTAGTCAGGCAGGTAGTAGCTCTTTGGCTACTTCGTTGAAGCGTCTCCA
ACTGAGCGGTGCTCATGAGGGATCTGTTTGCAGTGACGATCTGGATGACG
ATGACGATTTGTCCATTGGTGGTGGTGTCTTTTTGGAGCCTAGACACACC
GACGAGAATAGCAGCACCAATAACAAGGGCAAGGAGAAGGTCTTCACCGG
CTACGATCCTCAGGGAAACCCGCATGTACTCACCCACCGCGCAGAGGTTA
CGCAGTCCTACCAGAGCGAATGGTCTGTCTGGGGAGTTAAGAACAAAGCC
CTTCGAAGTGAAGCCGGTCCCGCCAGATCAACGCCGAAGAGGGAAAGAAA
CTTCGCCAAAGTCCCGAGCGCGCGCTATGAAAAGCACGAACTGCCGACCA
TGGCCATTCCTGATTCCAGTGGCGCGAACATCCCTTCTGACGATGAGGAC
GAAGTGAACGATTTGGACGTCTTTCTGTGAATGGGCCCATCCAGACGGGC
CACTGTGGTCCCAAACGCCTTTGCCGGTGGCTATAGCCAGACAGTCAGAA
ACCGGCTTGACAAGGTTGTTTTCCCGGATAGAATCAAATGCGGAACATGC
AAGAAGTTTCGGTACATCGGCACTTTCTCTAACAGACAACTGGACATTCT
ACGCCATGCGGTAGTGGCTGAGGGAGCTTCGGCTGCTACCAGCGGACGTG
CTAGATGCAGACAGTGCACCGGTCCAGGAAATACTGAATTGAAATGCACA
CAGTGTGACCGCGTCAAATCGATCGAAGAGTTCGCGAAGAACCAGCGGCA
CGAGCGTGATACTGCGCGTTGCATGAACTGTGTCCAGAAACATACGGAAA
CTGAACCCTTGATGGATGAAATTAAGCAGATCACCGGAGGCGATGATACT
ACTGCTAGCTCTGTTACTAGTCAGGCAGGTAGTAGCTCTTTGGCTACTTC
GTTGAAGCGTCTCCAACTGAGCGGTGCTCATGAGGGATCTGTTTGCAGTG
ACGATCTGGATGACGATGACGATTTGTCCATTGGTGGTGGTGTCTTTTTG
GAGCCTAGACACACCGACGAGAATAGCAGCACCAATAACAAGGGCAAGGA
GAAGGTCTTCACCGGCTACGATCCTCAGGGAAACCCGCATGTACTCACCC
ACCGCGCAGAGGTTACGCAGTCCTACCAGAGCGAATGGTCTGTCTGGGGA
GTTAAGAACAAAGCCCTTCGAAGTGAAGCCGGTCCCGCCAGATCAACGCC
GAAGAGGGAAAGAAACTTCGCCAAAGTCCCGAGCGCGCGCTATGAAAAGC
ACGAACTGCCGACCATGGCCATTCCTGATTCCAGTGGCGCGAACATCCCT
TCTGACGATGAGGACGAAGTGAACGATTTGGACGTCTTTCTGTGAATGGG
CCCATCCAGACGGGCCACTGTGGTCCCAAACGCCTTTGCCGGTGGCTATA
GCCAGACAGTCAGAAACCGGCTTGACAAGGTTGTTTTCCCGGATAGAATC
AAATGCGGAACATGCAAGAAGTTTCGGTACATCGGCACTTTCTCTAACAG
ACAACTGGACATTCTACGCCATGCGGTAGTGGCTGAGGGAGCTTCGGCTG
CTACCAGCGGACGTGCTAGATGCAGACAGTGCACCGGTCCAGGAAATACT
GAATTGAAATGCACACAGTGTGACCGCGTCAAATCGATCGAAGAGTTCGC
GAAGAACCAGCGGCACGAGCGTGATACTGCGCGTTGCATGAACTGTGTCC
AGAAACATACGGAAACTGAACCCTTGATGGATGAAATTAAGCAGATCACC
GGAGGCGATGATACTACTGCTAGCTCTGTTACTAGTCAGGCAGGTAGTAG
CTCTTTGGCTACTTCGTTGAAGCGTCTCCAACTGAGCGGTGCTCATGAGG
GATCTGTTTGCAGTGACGATCTGGATGACGATGACGATTTGTCCATTGGT
GGTGGTGTCTTTTTGGAGCCTAGACACACCGACGAGAATAGCAGCACCAA
TAACAAGGGCAAGGAGAAGGTCTTCACCGGCTACGATCCTCAGGGAAACC
CGCATGTACTCACCCACCGCGCAGAGGTTACGCAGTCCTACCAGAGCGAA
TGGTCTGTCTGGGGAGTTAAGAACAAAGCCCTTCGAAGTGAAGCCGGTCC
CGCCAGATCAACGCCGAAGAGGGAAAGAAACTTCGCCAAAGTCCCGAGCG
CGCGCTATGAAAAGCACGAACTGCCGACCATGGCCATTCCTGATTCCAGT
GGCGCGAACATCCCTTCTGACGATGAGGACGAAGTGAACGATTTGGACGT
CTTTCTGTGAATGGGCCCATCCAGACGGGCCACTGTGGTCCCAAACGCCT
TTGCCGGTGGCTATAGCCAGACAGTCAGAAACCGGCTTGACAAGGTTGTT
TTCCCGGATAGAATCAAATGCGGAACATGCAAGAAGTTTCGGTACATCGG
CACTTTCTCTAACAGACAACTGGACATTCTACGCCATGCGGTAGTGGCTG
AGGGAGCTTCGGCTGCTACCAGCGGACGTGCTAGATGCAGACAGTGCACC
GGTCCAGGAAATACTGAATTGAAATGCACACAGTGTGACCGCGTCAAATC
GATCGAAGAGTTCGCGAAGAACCAGCGGCACGAGCGTGATACTGCGCGTT
GCATGAACTGTGTCCAGAAACATACGGAAACTGAACCCTTGATGGATGAA
ATTAAGCAGATCACCGGAGGCGATGATACTACTGCTAGCTCTGTTACTAG
TCAGGCAGGTAGTAGCTCTTTGGCTACTTCGTTGAAGCGTCTCCAACTGA
GCGGTGCTCATGAGGGATCTGTTTGCAGTGACGATCTGGATGACGATGAC
GATTTGTCCATTGGTGGTGGTGTCTTTTTGGAGCCTAGACACACCGACGA
GAATAGCAGCACCAATAACAAGGGCAAGGAGAAGGTCTTCACCGGCTACG
ATCCTCAGGGAAACCCGCATGTACTCACCCACCGCGCAGAGGTTACGCAG
TCCTACCAGAGCGAATGGTCTGTCTGGGGAGTTAAGAACAAAGCCCTTCG
AAGTGAAGCCGGTCCCGCCAGATCAACGCCGAAGAGGGAAAGAAACTTCG
CCAAAGTCCCGAGCGCGCGCTATGAAAAGCACGAACTGCCGACCATGGCC
ATTCCTGATTCCAGTGGCGCGAACATCCCTTCTGACGATGAGGACGAAGT
GAACGATTTGGACGTCTTTCTGTGAATGGGCCCATCCAGACGGGCCACTG
TGGTCCCAAACGCCTTTGCCGGTGGCTATAGCCAGACAGTCAGAAACCGG
CTTGACAAGGTTGTTTTCCCGGATAGAATCAAATGCGGAACATGCAAGAA
GTTTCGGTACATCGGCACTTTCTCTAACAGACAACTGGACATTCTACGCC
ATGCGGTAGTGGCTGAGGGAGCTTCGGCTGCTACCAGCGGACGTGCTAGA
TGCAGACAGTGCACCGGTCCAGGAAATACTGAATTGAAATGCACACAGTG
TGACCGCGTCAAATCGATCGAAGAGTTCGCGAAGAACCAGCGGCACGAGC
GTGATACTGCGCGTTGCATGAACTGTGTCCAGAAACATACGGAAACTGAA
CCCTTGATGGATGAAATTAAGCAGATCACCGGAGGCGATGATACTACTGC
TAGCTCTGTTACTAGTCAGGCAGGTAGTAGCTCTTTGGCTACTTCGTTGA
AGCGTCTCCAACTGAGCGGTGCTCATGAGGGATCTGTTTGCAGTGACGAT
CTGGATGACGATGACGATTTGTCCATTGGTGGTGGTGTCTTTTTGGAGCC
TAGACACACCGACGAGAATAGCAGCACCAATAACAAGGGCAAGGAGAAGG
TCTTCACCGGCTACGATCCTCAGGGAAACCCGCATGTACTCACCCACCGC
GCAGAGGTTACGCAGTCCTACCAGAGCGAATGGTCTGTCTGGGGAGTTAA
GAACAAAGCCCTTCGAAGTGAAGCCGGTCCCGCCAGATCAACGCCGAAGA
GGGAAAGAAACTTCGCCAAAGTCCCGAGCGCGCGCTATGAAAAGCACGAA
CTGCCGACCATGGCCATTCCTGATTCCAGTGGCGCGAACATCCCTTCTGA
CGATGAGGACGAAGTGAACGATTTGGACGTCTTTCTGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006460KJC3_006460Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006460-T1KJC3_006460-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006460-T1.utr5p1KJC3_006460-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_006460-T1.utr5p2KJC3_006460-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006460-T1.utr5p3KJC3_006460-T1.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006460-T1.exon1KJC3_006460-T1.exon1Aspergillus niger KJC3exon
KJC3_006460-T1.exon2KJC3_006460-T1.exon2Aspergillus niger KJC3exon
KJC3_006460-T1.exon3KJC3_006460-T1.exon3Aspergillus niger KJC3exon
KJC3_006460-T1.exon4KJC3_006460-T1.exon4Aspergillus niger KJC3exon
KJC3_006460-T1.exon5KJC3_006460-T1.exon5Aspergillus niger KJC3exon
KJC3_006460-T1.exon6KJC3_006460-T1.exon6Aspergillus niger KJC3exon
KJC3_006460-T1.exon7KJC3_006460-T1.exon7Aspergillus niger KJC3exon
KJC3_006460-T1.exon8KJC3_006460-T1.exon8Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006460-T1.cdsKJC3_006460-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR043069
DBxrefInterPro:IPR024630
DBxrefPFAM:PF12898
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5775941..5777982 +
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