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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5778700..5782721+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006461-T1 ID=KJC3_006461-T1|Name=KJC3_006461-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4022bp|location=Sequence derived from alignment at ch4:5778700..5782721+ (Aspergillus niger KJC3)
CTTACCTTTTTATTTTTCTCTACTTGTCATCTGCTCTTTTCTTTGTCTTT
CGATCTTCTGTTCCTTTCTGCATCAGACACGCGACGACCCACTTCAGCTG
TCACTCCTCTGCTTTTCTCTGCCCAGCCCACTTCGCTACACACTCAGTGT
ATCCCGTTGGTTTCACCATCCGTCGCCCCTCTTCCTGCCCCGTCTTTTTA
TTTTCTACTGCTTTCCCTCTATCTCCGTGAAGTCCAGTCGACCCGTTGCC
ACACGATTGTCGCACCTCTGCTTCCATTTGCTTCAATATTTTTGGCCCTT
GGCCCTCTTTGTAGCCTTTTTTCCCCCATCAGCTCGATACCTCATTCATA
TCAGCTCGATACCTCATTCATAAGACTGCTCTGGTGATTACTCTGCGCTC
GTGATTACGCAGGGCAAACACCTCTGACCCGGCGTCGTACGCCCCAGCGA
TGGCTTACAATAGCTTCCCCAACAGTCCTTCTTACTCGCAGTTTGGAAGC
ATGAACCATGCCAATCCAAACGAAAATGGCGCATCATCTTACACCCCTCC
GTACCCTGCACAATATGGGCCGGAGCAGGTGAACATGCCTCAGCCTCAAG
TTCCTCCTACCTCCTCTTCCCCGACGGGTTACTATTCGAAACCGCCTTAC
GAGCCAGCTCCATGGCAGCAGCAACCGCAGCAACCACCAGCCCCCGGGAG
GATCAACGAGGCTGTGAATTCGGCCTTTCGCCAGGCTGACTCTCCGGCCT
ATCTGTCTCCAGAGGTTGTTTCTCAGATAACTGCGACGGTGATACAACAG
CTGAAAGCGACGGGGTTGGACAACTTGCAAAGTGATCAACAGCCGTCACC
ACCGCCACCGCCGCAATGGTCTCATCCGGCTACAGCCGCCATGTATGGTG
AACCGTCTCATTCACCTAGGCCGCAGAATACCCCTCCACCACCGCCTAAG
ATTCCCCCGGGTAACCCGGACTACCAAGCACCTGTACCGCCTGTACATCC
CAGCAGCCCTCATCCATTCCCCAGACCATCTGTGGGGCAGCCGGGTGAAA
GACGCGGATCGCCGACAAGCCAAAGCCAGGTCGGCGATCAACACCAGAGT
ATGGAATCCCGACCAAAGCCGCCATCAAGGGAAGCTACGGTGACAGAAAT
GACAACGTTGGATAAAGTATGGGGCAAATTCTTCGAGGACGGGAAGCCAA
CAGAAAAGCTTAGCATGCTATTGCGCGGCATCGCGGTCCACCTGGTAAGT
GCAGTCCGCAACCGGTGAGTTCTGGACGCTAACGAGTTCGTCTGGCAGAT
CGAGAATTACCCGCCAGAGAACACTCTGGTCGTCGTTCCTGAGAAGATGA
AACAGTTCTATGCAGATACAAGTGTGCCGTCTGATCCGTACCCCTGGGAA
GGTTAGTCCCAATGAACCGCTGTGCTGTATGACACGGACTTTGCTGACCT
ATAACAAGACATCTTCGACGACCGTACATCTCAGATCTCGAGATTGTTGC
GAAGGCTTGAAGTGGAACATCATCTCGTGCAACATAAACTTCATGAGAGA
CCTGACATCCCGGGCCTGACTCCCCGTGGCTTTGCCCGATGGGCAACTTT
AATGATCCAGGCCCATCCTGAGAAAGAGTACGAGCGCTTCCAAAAAGCAC
TGTTGAACATGCCCATCAACAACCCCGACAAGAGGAGCGAAAGACTACCC
AAGGAGTTCTCAAGGCGCTTGTTTCCTGATGCGCCAGATCTCTCATTGAG
AGAAGAGATCGACCAGAAAATCATGGAATTTTGCAACGTCGACTTGCCGC
CCATCACCGAGGACGAGTTGAAAAAGGTTGCCGCACAGCGGCACAAGAAA
TCTGCACACAAGGCGTCAGTGAGCTCTGTTGACTCGACCCCCTCGATGGG
AGAGCGTGAGCGTCAGCCCTACCATAGCACATCATCTTCTGCCATTGTCG
ATGACGAGGACAAAGAGGTCCCATCGCGGCCTATTGAACGCGAAAGGAAG
CCCTACACTGCGCAGCCTGGAGGTGGTAAAGTGTACGAAGAGAGAGCACC
CAGCCATCGTCATGCCAACTCGATGTCCGCAGGGTCTGGCTCCAAAGATG
GTCCGATCGATATCGGACCCCGAATGTCGGAGACGTACCTCCACACCGGG
AGTTCACAGCGTCCCACGACCACGTTCGGACGATCTCGAAGTCCGTCACG
GGGTGCTCATCCAGGCGGCGACTACAGACACTCCGAGAGTGACCTCTTAG
GCCATGGTAGTGGCTCTCGATATGGAGGGTTGTCTGATAATGACTACTAC
TACTCCCCAACCACATCCGCCCTCCCAGGAGACATCGACGACACTCGCAA
GTACCACAATCTCAGCCCTGACCATGGCGATAGGAGACTGTACGATGCCC
TGCGGACCCGAGACAGCGAGCGAGAAAAGAGCAAGCGCAGCAGCTGGGGC
GGCGACGAGGATTACTATCGCGCTGCCACCGGCTACGACTATAAACCGTA
TGGGTATAGGTGATATTGATATACTGACCGTGTTTGACCCTTGAAAATCA
TCGTTTTGGCGCGCTTTTTGTATGAAAAGAGATATCCGTCTATGAAGTTA
TGACTTATGATAGCGTTCATTATTAGTCTGCTTGGCTGCTTTCCTTTCTG
CCTTATATTTAGCCACTCATGACTTTATTCCTTTCTGAATGTGTACCACG
AACTTTCCTTCATTATCTGAACTTTGACTCCTTGTCCTCCCTTCCTCTTC
TTTCAGGAAATGTATAATATCACTAATACCACTTTCGGGATTGAACATTA
TATACCCCCAGCTCCACCAGAACCTACCCCCTCCACCCTCTTCCCCTCGA
TAATTCTCCTAACCCCCACCCTCTCCTCTCTCTCTCTCATCTTCCCCATC
CTCCTCCGATCCCTCTCCTCCCGTCTCCGTCTCTTCCGTCTAACCCTCTC
CTCCTCCTCCTCCTCCTCATCCATGTCCAATTCGCTTCTCAACCTCTCCA
CCCCCTCCCTCCCCAACCGCCACGGCACATCCAACACCTCCACCAAAAAC
CGCGACCGCTGATCCAGGAACCGCATCTCGGCGTTCGTGTCCCGGACCGG
AAATACCCGCTCGAGTTGGAGCTGGTTCACGCCGCGGAATGTGCTGATGG
TGCCCTTGAGGTGCGCGAAGGTGCCTGGTGCGTAGGGGCTTATGTCGAGG
GGGAGGGAGGTTGTGGGGGAGATATGCTGGGTGGGAGTGAATGAAGTAGG
TAAAGTAGATGAGGGAGTGGAGTTGGGGGTAGCTTTCTGAACGACCACGT
CGAGCGTTACACCGCTGCTATCGTCAAGGGTGAGGATCGTAACGGTGGGG
AATTCCGTTCGGGAGGTTATTAGTCCCAGTAGGGAGATGTATTGGATGGG
ATGGTTTTTGTAGAAGTAGATTTTTGGGTCTATAAGTTTTGCATTCGGAG
GTTAGGATGTACGTATGTATGTATGTATGTATGTCTTGGACGATAGAGAA
GGAGGATCGGATGTATATGTGGGAGAAACGAAAATAGAATATCATATGTG
CTTTGATTTACAATTGCAATGGGAGATGAAAGAGTTGGGGGAGATCTACC
TGGAAACTCCGGCCGTCTTTTCAATCTTAGCACATCCACCGCGGCCATCT
TCACCCAGGTGAAGTGGGTGGGGGACGCCTTGAAGCAATACGCCGGGTAG
AATTCAAGGTCGTCATGGTTTTCTGCTGTCGCCATGGGAGTGGGACCATT
TTCATGGTTGGGTGTTGGTCATTTGGGTTTGGTGCATGTGGTTGTAGTGA
AATTGGGAGGAAGATGGGGAGATGATGGTTGTTTGTTGATTTGAGTGATG
GATGGGGGTGTGGTGAGGGGAAACCGGCAGGTAGCTTTGTTATCGGTCAC
GTGGTGGATGGGGTCAGGTGGTGATAAGGATGTTCAGGATTTAAGATGTT
GTGTGGTGCTGGTTGAATTTGATGGGTAGTATTTAATGCTGAGTAGGGAT
GTGTTTTCCAAATTGAAGGAAT back to topCoding sequence (CDS) from alignment at ch4:5778700..5782721+ >KJC3_006461-T1 ID=KJC3_006461-T1|Name=KJC3_006461-T1|organism=Aspergillus niger KJC3|type=CDS|length=5859bp|location=Sequence derived from alignment at ch4:5778700..5782721+ (Aspergillus niger KJC3)
ATGGCTTACAATAGCTTCCCCAACAGTCCTTCTTACTCGCAGTTTGGAAG
CATGAACCATGCCAATCCAAACGAAAATGGCGCATCATCTTACACCCCTC
CGTACCCTGCACAATATGGGCCGGAGCAGGTGAACATGCCTCAGCCTCAA
GTTCCTCCTACCTCCTCTTCCCCGACGGGTTACTATTCGAAACCGCCTTA
CGAGCCAGCTCCATGGCAGCAGCAACCGCAGCAACCACCAGCCCCCGGGA
GGATCAACGAGGCTGTGAATTCGGCCTTTCGCCAGGCTGACTCTCCGGCC
TATCTGTCTCCAGAGGTTGTTTCTCAGATAACTGCGACGGTGATACAACA
GCTGAAAGCGACGGGGTTGGACAACTTGCAAAGTGATCAACAGCCGTCAC
CACCGCCACCGCCGCAATGGTCTCATCCGGCTACAGCCGCCATGTATGGT
GAACCGTCTCATTCACCTAGGCCGCAGAATACCCCTCCACCACCGCCTAA
GATTCCCCCGGGTAACCCGGACTACCAAGCACCTGTACCGCCTGTACATC
CCAGCAGCCCTCATCCATTCCCCAGACCATCTGTGGGGCAGCCGGGTGAA
AGACGCGGATCGCCGACAAGCCAAAGCCAGGTCGGCGATCAACACCAGAG
TATGGAATCCCGACCAAAGCCGCCATCAAGGGAAGCTACGGTGACAGAAA
TGACAACGTTGGATAAAGTATGGGGCAAATTCTTCGAGGACGGGAAGCCA
ACAGAAAAGCTTAGCATGCTATTGCGCGGCATCGCGGTCCACCTGATCGA
GAATTACCCGCCAGAGAACACTCTGGTCGTCGTTCCTGAGAAGATGAAAC
AGTTCTATGCAGATACAAGTGTGCCGTCTGATCCGTACCCCTGGGAAGAC
ATCTTCGACGACCGTACATCTCAGATCTCGAGATTGTTGCGAAGGCTTGA
AGTGGAACATCATCTCGTGCAACATAAACTTCATGAGAGACCTGACATCC
CGGGCCTGACTCCCCGTGGCTTTGCCCGATGGGCAACTTTAATGATCCAG
GCCCATCCTGAGAAAGAGTACGAGCGCTTCCAAAAAGCACTGTTGAACAT
GCCCATCAACAACCCCGACAAGAGGAGCGAAAGACTACCCAAGGAGTTCT
CAAGGCGCTTGTTTCCTGATGCGCCAGATCTCTCATTGAGAGAAGAGATC
GACCAGAAAATCATGGAATTTTGCAACGTCGACTTGCCGCCCATCACCGA
GGACGAGTTGAAAAAGGTTGCCGCACAGCGGCACAAGAAATCTGCACACA
AGGCGTCAGTGAGCTCTGTTGACTCGACCCCCTCGATGGGAGAGCGTGAG
CGTCAGCCCTACCATAGCACATCATCTTCTGCCATTGTCGATGACGAGGA
CAAAGAGGTCCCATCGCGGCCTATTGAACGCGAAAGGAAGCCCTACACTG
CGCAGCCTGGAGGTGGTAAAGTGTACGAAGAGAGAGCACCCAGCCATCGT
CATGCCAACTCGATGTCCGCAGGGTCTGGCTCCAAAGATGGTCCGATCGA
TATCGGACCCCGAATGTCGGAGACGTACCTCCACACCGGGAGTTCACAGC
GTCCCACGACCACGTTCGGACGATCTCGAAGTCCGTCACGGGGTGCTCAT
CCAGGCGGCGACTACAGACACTCCGAGAGTGACCTCTTAGGCCATGGTAG
TGGCTCTCGATATGGAGGGTTGTCTGATAATGACTACTACTACTCCCCAA
CCACATCCGCCCTCCCAGGAGACATCGACGACACTCGCAAGTACCACAAT
CTCAGCCCTGACCATGGCGATAGGAGACTGTACGATGCCCTGCGGACCCG
AGACAGCGAGCGAGAAAAGAGCAAGCGCAGCAGCTGGGGCGGCGACGAGG
ATTACTATCGCGCTGCCACCGGCTACGACTATAAACCGTATGGGTATAGG
TGAATGGCTTACAATAGCTTCCCCAACAGTCCTTCTTACTCGCAGTTTGG
AAGCATGAACCATGCCAATCCAAACGAAAATGGCGCATCATCTTACACCC
CTCCGTACCCTGCACAATATGGGCCGGAGCAGGTGAACATGCCTCAGCCT
CAAGTTCCTCCTACCTCCTCTTCCCCGACGGGTTACTATTCGAAACCGCC
TTACGAGCCAGCTCCATGGCAGCAGCAACCGCAGCAACCACCAGCCCCCG
GGAGGATCAACGAGGCTGTGAATTCGGCCTTTCGCCAGGCTGACTCTCCG
GCCTATCTGTCTCCAGAGGTTGTTTCTCAGATAACTGCGACGGTGATACA
ACAGCTGAAAGCGACGGGGTTGGACAACTTGCAAAGTGATCAACAGCCGT
CACCACCGCCACCGCCGCAATGGTCTCATCCGGCTACAGCCGCCATGTAT
GGTGAACCGTCTCATTCACCTAGGCCGCAGAATACCCCTCCACCACCGCC
TAAGATTCCCCCGGGTAACCCGGACTACCAAGCACCTGTACCGCCTGTAC
ATCCCAGCAGCCCTCATCCATTCCCCAGACCATCTGTGGGGCAGCCGGGT
GAAAGACGCGGATCGCCGACAAGCCAAAGCCAGGTCGGCGATCAACACCA
GAGTATGGAATCCCGACCAAAGCCGCCATCAAGGGAAGCTACGGTGACAG
AAATGACAACGTTGGATAAAGTATGGGGCAAATTCTTCGAGGACGGGAAG
CCAACAGAAAAGCTTAGCATGCTATTGCGCGGCATCGCGGTCCACCTGAT
CGAGAATTACCCGCCAGAGAACACTCTGGTCGTCGTTCCTGAGAAGATGA
AACAGTTCTATGCAGATACAAGTGTGCCGTCTGATCCGTACCCCTGGGAA
GACATCTTCGACGACCGTACATCTCAGATCTCGAGATTGTTGCGAAGGCT
TGAAGTGGAACATCATCTCGTGCAACATAAACTTCATGAGAGACCTGACA
TCCCGGGCCTGACTCCCCGTGGCTTTGCCCGATGGGCAACTTTAATGATC
CAGGCCCATCCTGAGAAAGAGTACGAGCGCTTCCAAAAAGCACTGTTGAA
CATGCCCATCAACAACCCCGACAAGAGGAGCGAAAGACTACCCAAGGAGT
TCTCAAGGCGCTTGTTTCCTGATGCGCCAGATCTCTCATTGAGAGAAGAG
ATCGACCAGAAAATCATGGAATTTTGCAACGTCGACTTGCCGCCCATCAC
CGAGGACGAGTTGAAAAAGGTTGCCGCACAGCGGCACAAGAAATCTGCAC
ACAAGGCGTCAGTGAGCTCTGTTGACTCGACCCCCTCGATGGGAGAGCGT
GAGCGTCAGCCCTACCATAGCACATCATCTTCTGCCATTGTCGATGACGA
GGACAAAGAGGTCCCATCGCGGCCTATTGAACGCGAAAGGAAGCCCTACA
CTGCGCAGCCTGGAGGTGGTAAAGTGTACGAAGAGAGAGCACCCAGCCAT
CGTCATGCCAACTCGATGTCCGCAGGGTCTGGCTCCAAAGATGGTCCGAT
CGATATCGGACCCCGAATGTCGGAGACGTACCTCCACACCGGGAGTTCAC
AGCGTCCCACGACCACGTTCGGACGATCTCGAAGTCCGTCACGGGGTGCT
CATCCAGGCGGCGACTACAGACACTCCGAGAGTGACCTCTTAGGCCATGG
TAGTGGCTCTCGATATGGAGGGTTGTCTGATAATGACTACTACTACTCCC
CAACCACATCCGCCCTCCCAGGAGACATCGACGACACTCGCAAGTACCAC
AATCTCAGCCCTGACCATGGCGATAGGAGACTGTACGATGCCCTGCGGAC
CCGAGACAGCGAGCGAGAAAAGAGCAAGCGCAGCAGCTGGGGCGGCGACG
AGGATTACTATCGCGCTGCCACCGGCTACGACTATAAACCGTATGGGTAT
AGGTGAATGGCTTACAATAGCTTCCCCAACAGTCCTTCTTACTCGCAGTT
TGGAAGCATGAACCATGCCAATCCAAACGAAAATGGCGCATCATCTTACA
CCCCTCCGTACCCTGCACAATATGGGCCGGAGCAGGTGAACATGCCTCAG
CCTCAAGTTCCTCCTACCTCCTCTTCCCCGACGGGTTACTATTCGAAACC
GCCTTACGAGCCAGCTCCATGGCAGCAGCAACCGCAGCAACCACCAGCCC
CCGGGAGGATCAACGAGGCTGTGAATTCGGCCTTTCGCCAGGCTGACTCT
CCGGCCTATCTGTCTCCAGAGGTTGTTTCTCAGATAACTGCGACGGTGAT
ACAACAGCTGAAAGCGACGGGGTTGGACAACTTGCAAAGTGATCAACAGC
CGTCACCACCGCCACCGCCGCAATGGTCTCATCCGGCTACAGCCGCCATG
TATGGTGAACCGTCTCATTCACCTAGGCCGCAGAATACCCCTCCACCACC
GCCTAAGATTCCCCCGGGTAACCCGGACTACCAAGCACCTGTACCGCCTG
TACATCCCAGCAGCCCTCATCCATTCCCCAGACCATCTGTGGGGCAGCCG
GGTGAAAGACGCGGATCGCCGACAAGCCAAAGCCAGGTCGGCGATCAACA
CCAGAGTATGGAATCCCGACCAAAGCCGCCATCAAGGGAAGCTACGGTGA
CAGAAATGACAACGTTGGATAAAGTATGGGGCAAATTCTTCGAGGACGGG
AAGCCAACAGAAAAGCTTAGCATGCTATTGCGCGGCATCGCGGTCCACCT
GATCGAGAATTACCCGCCAGAGAACACTCTGGTCGTCGTTCCTGAGAAGA
TGAAACAGTTCTATGCAGATACAAGTGTGCCGTCTGATCCGTACCCCTGG
GAAGACATCTTCGACGACCGTACATCTCAGATCTCGAGATTGTTGCGAAG
GCTTGAAGTGGAACATCATCTCGTGCAACATAAACTTCATGAGAGACCTG
ACATCCCGGGCCTGACTCCCCGTGGCTTTGCCCGATGGGCAACTTTAATG
ATCCAGGCCCATCCTGAGAAAGAGTACGAGCGCTTCCAAAAAGCACTGTT
GAACATGCCCATCAACAACCCCGACAAGAGGAGCGAAAGACTACCCAAGG
AGTTCTCAAGGCGCTTGTTTCCTGATGCGCCAGATCTCTCATTGAGAGAA
GAGATCGACCAGAAAATCATGGAATTTTGCAACGTCGACTTGCCGCCCAT
CACCGAGGACGAGTTGAAAAAGGTTGCCGCACAGCGGCACAAGAAATCTG
CACACAAGGCGTCAGTGAGCTCTGTTGACTCGACCCCCTCGATGGGAGAG
CGTGAGCGTCAGCCCTACCATAGCACATCATCTTCTGCCATTGTCGATGA
CGAGGACAAAGAGGTCCCATCGCGGCCTATTGAACGCGAAAGGAAGCCCT
ACACTGCGCAGCCTGGAGGTGGTAAAGTGTACGAAGAGAGAGCACCCAGC
CATCGTCATGCCAACTCGATGTCCGCAGGGTCTGGCTCCAAAGATGGTCC
GATCGATATCGGACCCCGAATGTCGGAGACGTACCTCCACACCGGGAGTT
CACAGCGTCCCACGACCACGTTCGGACGATCTCGAAGTCCGTCACGGGGT
GCTCATCCAGGCGGCGACTACAGACACTCCGAGAGTGACCTCTTAGGCCA
TGGTAGTGGCTCTCGATATGGAGGGTTGTCTGATAATGACTACTACTACT
CCCCAACCACATCCGCCCTCCCAGGAGACATCGACGACACTCGCAAGTAC
CACAATCTCAGCCCTGACCATGGCGATAGGAGACTGTACGATGCCCTGCG
GACCCGAGACAGCGAGCGAGAAAAGAGCAAGCGCAGCAGCTGGGGCGGCG
ACGAGGATTACTATCGCGCTGCCACCGGCTACGACTATAAACCGTATGGG
TATAGGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006461-T1.utr5p1 | KJC3_006461-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006461-T1.utr3p1 | KJC3_006461-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5778700..5782721 + |
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