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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5781497..5782527- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006462-T1 ID=KJC3_006462-T1|Name=KJC3_006462-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1031bp|location=Sequence derived from alignment at ch4:5781497..5782527- (Aspergillus niger KJC3)
CCATCATCTCCCCATCTTCCTCCCAATTTCACTACAACCACATGCACCAA
ACCCAAATGACCAACACCCAACCATGAAAATGGTCCCACTCCCATGGCGA
CAGCAGAAAACCATGACGACCTTGAATTCTACCCGGCGTATTGCTTCAAG
GCGTCCCCCACCCACTTCACCTGGGTGAAGATGGCCGCGGTGGATGTGCT
AAGATTGAAAAGACGGCCGGAGTTTCCAGGTAGATCTCCCCCAACTCTTT
CATCTCCCATTGCAATTGTAAATCAAAGCACATATGATATTCTATTTTCG
TTTCTCCCACATATACATCCGATCCTCCTTCTCTATCGTCCAAGACATAC
ATACATACATACATACGTACATCCTAACCTCCGAATGCAAAACTTATAGA
CCCAAAAATCTACTTCTACAAAAACCATCCCATCCAATACATCTCCCTAC
TGGGACTAATAACCTCCCGAACGGAATTCCCCACCGTTACGATCCTCACC
CTTGACGATAGCAGCGGTGTAACGCTCGACGTGGTCGTTCAGAAAGCTAC
CCCCAACTCCACTCCCTCATCTACTTTACCTACTTCATTCACTCCCACCC
AGCATATCTCCCCCACAACCTCCCTCCCCCTCGACATAAGCCCCTACGCA
CCAGGCACCTTCGCGCACCTCAAGGGCACCATCAGCACATTCCGCGGCGT
GAACCAGCTCCAACTCGAGCGGGTATTTCCGGTCCGGGACACGAACGCCG
AGATGCGGTTCCTGGATCAGCGGTCGCGGTTTTTGGTGGAGGTGTTGGAT
GTGCCGTGGCGGTTGGGGAGGGAGGGGGTGGAGAGGTTGAGAAGCGAATT
GGACATGGATGAGGAGGAGGAGGAGGAGGAGAGGGTTAGACGGAAGAGAC
GGAGACGGGAGGAGAGGGATCGGAGGAGGATGGGGAAGATGAGAGAGAGA
GAGGAGAGGGTGGGGGTTAGGAGAATTATCGAGGGGAAGAGGGTGGAGGG
GGTAGGTTCTGGTGGAGCTGGGGGTATATAA back to topCoding sequence (CDS) from alignment at ch4:5781497..5782527- >KJC3_006462-T1 ID=KJC3_006462-T1|Name=KJC3_006462-T1|organism=Aspergillus niger KJC3|type=CDS|length=1536bp|location=Sequence derived from alignment at ch4:5781497..5782527- (Aspergillus niger KJC3)
ACCCAAAAATCTACTTCTACAAAAACCATCCCATCCAATACATCTCCCTA
CTGGGACTAATAACCTCCCGAACGGAATTCCCCACCGTTACGATCCTCAC
CCTTGACGATAGCAGCGGTGTAACGCTCGACGTGGTCGTTCAGAAAGCTA
CCCCCAACTCCACTCCCTCATCTACTTTACCTACTTCATTCACTCCCACC
CAGCATATCTCCCCCACAACCTCCCTCCCCCTCGACATAAGCCCCTACGC
ACCAGGCACCTTCGCGCACCTCAAGGGCACCATCAGCACATTCCGCGGCG
TGAACCAGCTCCAACTCGAGCGGGTATTTCCGGTCCGGGACACGAACGCC
GAGATGCGGTTCCTGGATCAGCGGTCGCGGTTTTTGGTGGAGGTGTTGGA
TGTGCCGTGGCGGTTGGGGAGGGAGGGGGTGGAGAGGTTGAGAAGCGAAT
TGGACATGGATGAGGAGGAGGAGGAGGAGGAGAGGGTTAGACGGAAGAGA
CGGAGACGGGAGGAGAGGGATCGGAGGAGGATGGGGAAGATGAGAGAGAG
AGAGGAGAGGGTGGGGGTTAGGAGAATTATCGAGGGGAAGAGGGTGGAGG
GGGTAGGTTCTGGTGGAGCTGGGGGTATATAAATGGCGACAGCAGAAAAC
CATGACGACCTTGAATTCTACCCGGCGTATTGCTTCAAGGCGTCCCCCAC
CCACTTCACCTGGGTGAAGATGGCCGCGGTGGATGTGCTAAGATTGAAAA
GACGGCCGGAGTTTCCAGACCCAAAAATCTACTTCTACAAAAACCATCCC
ATCCAATACATCTCCCTACTGGGACTAATAACCTCCCGAACGGAATTCCC
CACCGTTACGATCCTCACCCTTGACGATAGCAGCGGTGTAACGCTCGACG
TGGTCGTTCAGAAAGCTACCCCCAACTCCACTCCCTCATCTACTTTACCT
ACTTCATTCACTCCCACCCAGCATATCTCCCCCACAACCTCCCTCCCCCT
CGACATAAGCCCCTACGCACCAGGCACCTTCGCGCACCTCAAGGGCACCA
TCAGCACATTCCGCGGCGTGAACCAGCTCCAACTCGAGCGGGTATTTCCG
GTCCGGGACACGAACGCCGAGATGCGGTTCCTGGATCAGCGGTCGCGGTT
TTTGGTGGAGGTGTTGGATGTGCCGTGGCGGTTGGGGAGGGAGGGGGTGG
AGAGGTTGAGAAGCGAATTGGACATGGATGAGGAGGAGGAGGAGGAGGAG
AGGGTTAGACGGAAGAGACGGAGACGGGAGGAGAGGGATCGGAGGAGGAT
GGGGAAGATGAGAGAGAGAGAGGAGAGGGTGGGGGTTAGGAGAATTATCG
AGGGGAAGAGGGTGGAGGGGGTAGGTTCTGGTGGAGCTGGGGGTATATAA
ATGGCGACAGCAGAAAACCATGACGACCTTGAATTCTACCCGGCGTATTG
CTTCAAGGCGTCCCCCACCCACTTCACCTGGGTGAAGATGGCCGCGGTGG
ATGTGCTAAGATTGAAAAGACGGCCGGAGTTTCCAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006462-T1.utr5p1 | KJC3_006462-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012340 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5781497..5782527 - |
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