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KJC3_006463-T1, KJC3_006463-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006463-T1
Unique NameKJC3_006463-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5783001..5784106-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006463-T1 ID=KJC3_006463-T1|Name=KJC3_006463-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1106bp|location=Sequence derived from alignment at ch4:5783001..5784106- (Aspergillus niger KJC3)
CCCTTATCCCCAATCCGAATCCTCTCCACTGCAGGCAGTCGGCTATACCA
CGCGATCCTACATTCCCTGGTCCGATCCGGATGACGTCGACCACTTCCAG
CTTCCGCGATCGATCGATCCAGAGGATCAAATAAATACATCGCAACTTCA
CACTCAGCCCTCCAGAATCCTCCTTATTCTTTCATCCAAGCTGGAGAATT
AAAACAAACATGCCTTGGTCCGCGGCTCTCCCTCAGGCGATGTTCGCCCA
CCCCCTAGTATCCGTCGTGACGCCCATCACGACGGGTTCTCTAGTCGGGT
ACCATACCAACCGTGAGCTTCCCCTACCTATGTCTACCACTCAATTCCAC
CTCTTTGTATGCAAAATATTAACTAAAACCAGGCAAAGGTCGCACCAAAC
AAGTCTACCATTCTCTCAAAAAACCCCCTTTCTACCCCCCAACCTGGGCC
TTCCCGGTCGTCTGGACTGTCCTCTACGGCATGATGGGCTTCGCAATCCA
CCACGCAACAGTATCAGGAACCATAGCCACCGCATACCCAACTTCCTCAT
CATCATCTATTGTCCAAGACTGGGCCGTCAAGTCTCAGACCCTATACATT
TCCCAGCTGGCGTTGAATCACCTCTGGATGCCGCTGTTCTTCATGTTCCG
GAAGCCGGCGTGGGCGTTGGCGGATCTGCTTCTTCTGAGCGGGAATGTGG
CGGCGTTGATGCATATCTGGTGGAAGCATGACCGGGTGGCGTTCTGGTTG
ATGACGCCGTATGCGGCTTGGTTGGGGGTTGCGACGTATTTGAATGCTGG
GGTGGGGTACTTGAATAATTGGGTGATTGGGGATGGGAGGAAGGAGGAGT
GATTTTGTTTGTTGGTCTACTATATGTATGCGTGTATACATGGATTATAT
GGCGTTGATCAAATTTGATTTGAATATGTAAGATATCTGTTGGTTTGGGG
AAATAGGACTATTGTTTCATACTCAATCTGATTGAATTACGGGAATGTTC
TCAGCTTCTTGCAGGTAGCGAAAAGGTCATTGATAGCGCAGACGGAGTAC
CAGTTCTTTGTGTCTGTCTGCATACAATCTGCGATATAGTAATAGTAATA
TGGCCG
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Coding sequence (CDS) from alignment at ch4:5783001..5784106-

>KJC3_006463-T1 ID=KJC3_006463-T1|Name=KJC3_006463-T1|organism=Aspergillus niger KJC3|type=CDS|length=1146bp|location=Sequence derived from alignment at ch4:5783001..5784106- (Aspergillus niger KJC3)
GCAAAGGTCGCACCAAACAAGTCTACCATTCTCTCAAAAAACCCCCTTTC
TACCCCCCAACCTGGGCCTTCCCGGTCGTCTGGACTGTCCTCTACGGCAT
GATGGGCTTCGCAATCCACCACGCAACAGTATCAGGAACCATAGCCACCG
CATACCCAACTTCCTCATCATCATCTATTGTCCAAGACTGGGCCGTCAAG
TCTCAGACCCTATACATTTCCCAGCTGGCGTTGAATCACCTCTGGATGCC
GCTGTTCTTCATGTTCCGGAAGCCGGCGTGGGCGTTGGCGGATCTGCTTC
TTCTGAGCGGGAATGTGGCGGCGTTGATGCATATCTGGTGGAAGCATGAC
CGGGTGGCGTTCTGGTTGATGACGCCGTATGCGGCTTGGTTGGGGGTTGC
GACGTATTTGAATGCTGGGGTGGGGTACTTGAATAATTGGGTGATTGGGG
ATGGGAGGAAGGAGGAGTGAATGCCTTGGTCCGCGGCTCTCCCTCAGGCG
ATGTTCGCCCACCCCCTAGTATCCGTCGTGACGCCCATCACGACGGGTTC
TCTAGTCGGGTACCATACCAACCGCAAAGGTCGCACCAAACAAGTCTACC
ATTCTCTCAAAAAACCCCCTTTCTACCCCCCAACCTGGGCCTTCCCGGTC
GTCTGGACTGTCCTCTACGGCATGATGGGCTTCGCAATCCACCACGCAAC
AGTATCAGGAACCATAGCCACCGCATACCCAACTTCCTCATCATCATCTA
TTGTCCAAGACTGGGCCGTCAAGTCTCAGACCCTATACATTTCCCAGCTG
GCGTTGAATCACCTCTGGATGCCGCTGTTCTTCATGTTCCGGAAGCCGGC
GTGGGCGTTGGCGGATCTGCTTCTTCTGAGCGGGAATGTGGCGGCGTTGA
TGCATATCTGGTGGAAGCATGACCGGGTGGCGTTCTGGTTGATGACGCCG
TATGCGGCTTGGTTGGGGGTTGCGACGTATTTGAATGCTGGGGTGGGGTA
CTTGAATAATTGGGTGATTGGGGATGGGAGGAAGGAGGAGTGAATGCCTT
GGTCCGCGGCTCTCCCTCAGGCGATGTTCGCCCACCCCCTAGTATCCGTC
GTGACGCCCATCACGACGGGTTCTCTAGTCGGGTACCATACCAACC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006463KJC3_006463Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006463-T1KJC3_006463-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006463-T1.cdsKJC3_006463-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006463-T1.utr3p1KJC3_006463-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006463-T1.exon2KJC3_006463-T1.exon2Aspergillus niger KJC3exon
KJC3_006463-T1.exon1KJC3_006463-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006463-T1.utr5p1KJC3_006463-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR038330
DBxrefInterPro:IPR004307
DBxrefPFAM:PF03073
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5783001..5784106 -
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