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KJC3_006467-T1, KJC3_006467-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006467-T1
Unique NameKJC3_006467-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5793613..5795736-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006467-T1 ID=KJC3_006467-T1|Name=KJC3_006467-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2124bp|location=Sequence derived from alignment at ch4:5793613..5795736- (Aspergillus niger KJC3)
GCTCCATCTCTCACCACCACAACCATCCCTCCACTCGATAGGTAGCGCCT
CTGCGCTACTAACCACACCCACCATGGACTACGAGATGGATATCGAGCCC
ACCGGGCCCCAAGTCACCGTTCGCGAAGTGAGTTGACCTCTGACCAATCT
ACCAATTACACCATCTATACCAACACCAGCCCATGCAACACAATCACCCC
ATCGAACCTTTCCAACCATCCTTACTAACACTTTGAATCTTAATAGGCCG
AACCCACTCGCGTTGACTTTAAACTCACCTCGGTCGACCTCGCTTTCGCC
AACTCCCTCCGCCGAGTAATGCTCTCCGAAATCCCCACGATGGCCATCGA
CCTCGTCGAAGTGGAAAAGAACACCTCCGTACTGCCCGACGAATTCCTCG
CTCACCGTCTCGGCCTTATCCCCCTGATCAGCAAAAACTGCGACCAAGAC
GTCGAATACACGCGCGACTGCGAATGCGAGGACCACTGCGCGCGCTGCTC
CGTGACCCTGTCGCTCCATGCGCGGTGCACAGGCGACGATATCATGCGGG
TGTATGCGCGCGATCTCGTGGTATCAGGAGAACGGGCGAACGAGTGGGTG
GGAAACCCGGTGATCTTGGATCCGGAGGGAAACGGGCCCTTGATTTGTAA
ATTGAGACGCGGCCAGGAGTTGAAGATGACGTGTATTGCGAAGAAGGGTA
TTGCGAAGGAACATGCGAAGTGGATGCCCACGTCGGCGATTGGGTTTGAA
TATGATCCGCATAATAATTTGAGACATGTGGATTACTGGTATGAGGAGGA
TCCGGCGAAGGAATGGTATGTTTTATCCCAAACCCTCATTTTCATTTTAC
TTCTATTCCAGCACCTTTCTGCATCGCATACTACAGAGCAAGGGAATTCT
ACATGAGCGAGCAAAGATCAATGAGCTAATAGTACAACCAATACAGGCCC
GTCTCAGCCAACGCAGGATGGGAACAGCCTGCTCCCCCAGACCAACCATT
CGACTACGACGCCCAGCCCAACAGCTTCTACATCGACGTCGAGAGCATCG
GCACCCTTGAACCGGACATGATCATCCAGCAAGGAATCACAGTGTTGCAA
CGGAAGCTCGCCTCTGTGATATCCTCGTTATCAGGCACCGAAGGCGCAGA
CCGCAACGGCGTCATGGGCGGTGACGACGAAGATATGATGGGTGTGCGCA
GCCCGGATGCCTACGAACCGCCCGAGGGTATGGACGGTGGCTTTACGGCG
TATGCGAATGGTGGAGGCGCTAGCGCATGGGGTCCTAGTGCTACGACGCC
ATATGGAGTCACGCCATATGGGGGTGGATATGGATTCTAAGGTGGAATCA
GTTCGTCGCACCTTCCCTTCTCATCTGACAAGGAAAGAAGCGGGGCATGC
TCTTACCTTTTTTCATCCATCTCATAACTCACCATGAAAGAAAAAAAAAC
GGAAAAGACCAAAAACAAACCCTGTCTAGTCACATGCTCATGCTCATACT
CACCTTACCAGTGACGGATGGTCATGACCATGAATGGCAGACAGTGGCAC
CCACAACCCATCACGCAGCCTCGCATGAAGCCACCAAAAAACCAAACTTA
CCATAACCACTAACTAGTTACCACTTGCTACCAAGACCATATTACTATCT
ATCAGTTAGCATCCGGATGGAGTTCGGGGGAGTTGCGTTTCTACTCGATT
TTCGGCCAGGCGTGAGGAATTACTACTTGCTTGCTTGATTCTTCAATTCA
CATATCATATTTTCACAAATCTATTTCTTTTTTTTCTTTGCCATCTTTGT
CTTTTCCATTTCTGGGTTCAAACTTACTGCTGCACTGCAGTCAGTATGCT
TTGCTTGCTCCGTGTCTGCCTAGTCATAACTTGGCTGGTCTCCCCTGTGA
TATTAGATCTCTTTTCTCCCTTCTATGGCTATTACTACTATTTTGTGAAC
TGCGCATTCAATTGCTGTATGCTAAAATTGGGCTGTTGGAAACGGGGATG
AGTTTGGGGTGTTCTACAGAACTGAGCCGGGGGTGGTAACCTCATTAGCA
AGGGTATCACATATAAAATTACATTGATACTTACAGACGAAGCTGCATGA
AAATGTTTCAGAGTGATATATGCT
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Coding sequence (CDS) from alignment at ch4:5793613..5795736-

>KJC3_006467-T1 ID=KJC3_006467-T1|Name=KJC3_006467-T1|organism=Aspergillus niger KJC3|type=CDS|length=3051bp|location=Sequence derived from alignment at ch4:5793613..5795736- (Aspergillus niger KJC3)
GCCCGTCTCAGCCAACGCAGGATGGGAACAGCCTGCTCCCCCAGACCAAC
CATTCGACTACGACGCCCAGCCCAACAGCTTCTACATCGACGTCGAGAGC
ATCGGCACCCTTGAACCGGACATGATCATCCAGCAAGGAATCACAGTGTT
GCAACGGAAGCTCGCCTCTGTGATATCCTCGTTATCAGGCACCGAAGGCG
CAGACCGCAACGGCGTCATGGGCGGTGACGACGAAGATATGATGGGTGTG
CGCAGCCCGGATGCCTACGAACCGCCCGAGGGTATGGACGGTGGCTTTAC
GGCGTATGCGAATGGTGGAGGCGCTAGCGCATGGGGTCCTAGTGCTACGA
CGCCATATGGAGTCACGCCATATGGGGGTGGATATGGATTCTAAGCCGAA
CCCACTCGCGTTGACTTTAAACTCACCTCGGTCGACCTCGCTTTCGCCAA
CTCCCTCCGCCGAGTAATGCTCTCCGAAATCCCCACGATGGCCATCGACC
TCGTCGAAGTGGAAAAGAACACCTCCGTACTGCCCGACGAATTCCTCGCT
CACCGTCTCGGCCTTATCCCCCTGATCAGCAAAAACTGCGACCAAGACGT
CGAATACACGCGCGACTGCGAATGCGAGGACCACTGCGCGCGCTGCTCCG
TGACCCTGTCGCTCCATGCGCGGTGCACAGGCGACGATATCATGCGGGTG
TATGCGCGCGATCTCGTGGTATCAGGAGAACGGGCGAACGAGTGGGTGGG
AAACCCGGTGATCTTGGATCCGGAGGGAAACGGGCCCTTGATTTGTAAAT
TGAGACGCGGCCAGGAGTTGAAGATGACGTGTATTGCGAAGAAGGGTATT
GCGAAGGAACATGCGAAGTGGATGCCCACGTCGGCGATTGGGTTTGAATA
TGATCCGCATAATAATTTGAGACATGTGGATTACTGGTATGAGGAGGATC
CGGCGAAGGAATGATGGACTACGAGATGGATATCGAGCCCACCGGGCCCC
AAGTCACCGTTCGCGAAGCCCGTCTCAGCCAACGCAGGATGGGAACAGCC
TGCTCCCCCAGACCAACCATTCGACTACGACGCCCAGCCCAACAGCTTCT
ACATCGACGTCGAGAGCATCGGCACCCTTGAACCGGACATGATCATCCAG
CAAGGAATCACAGTGTTGCAACGGAAGCTCGCCTCTGTGATATCCTCGTT
ATCAGGCACCGAAGGCGCAGACCGCAACGGCGTCATGGGCGGTGACGACG
AAGATATGATGGGTGTGCGCAGCCCGGATGCCTACGAACCGCCCGAGGGT
ATGGACGGTGGCTTTACGGCGTATGCGAATGGTGGAGGCGCTAGCGCATG
GGGTCCTAGTGCTACGACGCCATATGGAGTCACGCCATATGGGGGTGGAT
ATGGATTCTAAGCCGAACCCACTCGCGTTGACTTTAAACTCACCTCGGTC
GACCTCGCTTTCGCCAACTCCCTCCGCCGAGTAATGCTCTCCGAAATCCC
CACGATGGCCATCGACCTCGTCGAAGTGGAAAAGAACACCTCCGTACTGC
CCGACGAATTCCTCGCTCACCGTCTCGGCCTTATCCCCCTGATCAGCAAA
AACTGCGACCAAGACGTCGAATACACGCGCGACTGCGAATGCGAGGACCA
CTGCGCGCGCTGCTCCGTGACCCTGTCGCTCCATGCGCGGTGCACAGGCG
ACGATATCATGCGGGTGTATGCGCGCGATCTCGTGGTATCAGGAGAACGG
GCGAACGAGTGGGTGGGAAACCCGGTGATCTTGGATCCGGAGGGAAACGG
GCCCTTGATTTGTAAATTGAGACGCGGCCAGGAGTTGAAGATGACGTGTA
TTGCGAAGAAGGGTATTGCGAAGGAACATGCGAAGTGGATGCCCACGTCG
GCGATTGGGTTTGAATATGATCCGCATAATAATTTGAGACATGTGGATTA
CTGGTATGAGGAGGATCCGGCGAAGGAATGATGGACTACGAGATGGATAT
CGAGCCCACCGGGCCCCAAGTCACCGTTCGCGAAGCCCGTCTCAGCCAAC
GCAGGATGGGAACAGCCTGCTCCCCCAGACCAACCATTCGACTACGACGC
CCAGCCCAACAGCTTCTACATCGACGTCGAGAGCATCGGCACCCTTGAAC
CGGACATGATCATCCAGCAAGGAATCACAGTGTTGCAACGGAAGCTCGCC
TCTGTGATATCCTCGTTATCAGGCACCGAAGGCGCAGACCGCAACGGCGT
CATGGGCGGTGACGACGAAGATATGATGGGTGTGCGCAGCCCGGATGCCT
ACGAACCGCCCGAGGGTATGGACGGTGGCTTTACGGCGTATGCGAATGGT
GGAGGCGCTAGCGCATGGGGTCCTAGTGCTACGACGCCATATGGAGTCAC
GCCATATGGGGGTGGATATGGATTCTAAGCCGAACCCACTCGCGTTGACT
TTAAACTCACCTCGGTCGACCTCGCTTTCGCCAACTCCCTCCGCCGAGTA
ATGCTCTCCGAAATCCCCACGATGGCCATCGACCTCGTCGAAGTGGAAAA
GAACACCTCCGTACTGCCCGACGAATTCCTCGCTCACCGTCTCGGCCTTA
TCCCCCTGATCAGCAAAAACTGCGACCAAGACGTCGAATACACGCGCGAC
TGCGAATGCGAGGACCACTGCGCGCGCTGCTCCGTGACCCTGTCGCTCCA
TGCGCGGTGCACAGGCGACGATATCATGCGGGTGTATGCGCGCGATCTCG
TGGTATCAGGAGAACGGGCGAACGAGTGGGTGGGAAACCCGGTGATCTTG
GATCCGGAGGGAAACGGGCCCTTGATTTGTAAATTGAGACGCGGCCAGGA
GTTGAAGATGACGTGTATTGCGAAGAAGGGTATTGCGAAGGAACATGCGA
AGTGGATGCCCACGTCGGCGATTGGGTTTGAATATGATCCGCATAATAAT
TTGAGACATGTGGATTACTGGTATGAGGAGGATCCGGCGAAGGAATGATG
GACTACGAGATGGATATCGAGCCCACCGGGCCCCAAGTCACCGTTCGCGA
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046983protein dimerization activity
GO:0003899DNA-directed 5'-3' RNA polymerase activity
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006467KJC3_006467Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006467-T1KJC3_006467-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006467-T1.cdsKJC3_006467-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006467-T1.utr3p1KJC3_006467-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006467-T1.exon3KJC3_006467-T1.exon3Aspergillus niger KJC3exon
KJC3_006467-T1.exon2KJC3_006467-T1.exon2Aspergillus niger KJC3exon
KJC3_006467-T1.exon1KJC3_006467-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006467-T1.utr5p1KJC3_006467-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263PXH
DBxrefInterPro:IPR001514
DBxrefInterPro:IPR036603
DBxrefInterPro:IPR011262
DBxrefInterPro:IPR036643
DBxrefInterPro:IPR011263
DBxrefPFAM:PF01193
DBxrefPFAM:PF01000
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5793613..5795736 -
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