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KJC3_006492-T1, KJC3_006492-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006492-T1
Unique NameKJC3_006492-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5864968..5866282-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006492-T1 ID=KJC3_006492-T1|Name=KJC3_006492-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1315bp|location=Sequence derived from alignment at ch4:5864968..5866282- (Aspergillus niger KJC3)
ATGCTCGCTCTACTACGATTGTCACGGCTGCTAGGCAGCGATGGTGCTGG
CCACACGCACCTCGCTAGTCGCTCAAACACCGAGGTAGTTGAGGGTAGCG
ACCGAGCAGGGTTCATTGCCATGGGAGTGATTGCACTCATTTCGTTCATT
TCGGCCCTTGGCCTGTTGTCATTCCTTACCTACCGTTTCATTTTCTGGCG
CAAATATTACAAACGGCCTTTGGCGGAGAACCAATATGTCGTTCTCATTT
ACAACCTCCTGTTGGTCGATCTGCAACAAGCAACAGCTTTCTTGATATGT
CTCCACTGGATAACAAAAGGTCACGTCTACTATCCCAGTGCACCATGCGT
TCTTCAAGGATGGTGGATTCAAACGGGCGATCCCGGAAGTGGTTTGTTCG
TTCTGGCGATTGCCTTTCACACATGTGCCGTTGTGCTACGAGGTCGACAA
TTACCGTACCCAATATTTGTGGCTTGTGTTGTTGGGCTATGGATATTTAT
CATCATCCTGGGATTGATCCCCGTTGGAATGTTTGGCTCCGAGACCTTTG
TGATTTCTGAAGCTGGCTGGGTAAGCGACCGCAAGGATGTGATACAGATG
GAGGAAGTCACTAATTTACCCTGTCTTGCAGTGCTGGATCGGTCCCGACC
ATGAAACAGAACGTCTTTGGGTGCATTATCTCTGGATTTTCCTGGCAGAA
TTCGGCACGGTCGTTCTTTACGGAGTCATGTTTTTCTACTTGCGACGCCG
AATGAAGCAAGCCGCCACGCTTCGACAAAACCACCAGGAGAACCTGAAGC
GATTGAACCGAGTTGTCATCTACATGGTTATCTACCCGCTTGTCTATCTT
TTGCTTTCCCTGCCGCTAGCCGCCGGACGTATGTCAACGGCCCGACATAT
CGTTCCCAGTCGAGCGTACTTTGCCGTGGCCGGTTCGCTGATGGCGTTGT
CGGGTTTCGTTGATGTGCTTGTGTACACGCTCACTCGCCGACACCTGTTG
CTCGAAACCGAACTCAGTACTACGGATCGGATGTACAACTACACGGAATC
GAACGCATATCAGACACACATCACCACGGGCCGAGATGGCAAGAAAGTAC
GGATGGGATCCCGATTCCGGCGGGGCATGGGGATGCAGAGCATCAACGAC
ACGGTCAGAGACGACCGCGATTCATCTACAGAAGACATTGTGCGCAAGAC
GGACATGGAGCTGGCCGAGTTGGGCCACGGAGTGTACCAGGAGACGACGA
TCGAGATTTCGCACGAGCCAGCGGAACCGGAAGACTTCCAGAAGGGAGGT
CGCCACAGCGGGTGA
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Coding sequence (CDS) from alignment at ch4:5864968..5866282-

>KJC3_006492-T1 ID=KJC3_006492-T1|Name=KJC3_006492-T1|organism=Aspergillus niger KJC3|type=CDS|length=2508bp|location=Sequence derived from alignment at ch4:5864968..5866282- (Aspergillus niger KJC3)
TGCTGGATCGGTCCCGACCATGAAACAGAACGTCTTTGGGTGCATTATCT
CTGGATTTTCCTGGCAGAATTCGGCACGGTCGTTCTTTACGGAGTCATGT
TTTTCTACTTGCGACGCCGAATGAAGCAAGCCGCCACGCTTCGACAAAAC
CACCAGGAGAACCTGAAGCGATTGAACCGAGTTGTCATCTACATGGTTAT
CTACCCGCTTGTCTATCTTTTGCTTTCCCTGCCGCTAGCCGCCGGACGTA
TGTCAACGGCCCGACATATCGTTCCCAGTCGAGCGTACTTTGCCGTGGCC
GGTTCGCTGATGGCGTTGTCGGGTTTCGTTGATGTGCTTGTGTACACGCT
CACTCGCCGACACCTGTTGCTCGAAACCGAACTCAGTACTACGGATCGGA
TGTACAACTACACGGAATCGAACGCATATCAGACACACATCACCACGGGC
CGAGATGGCAAGAAAGTACGGATGGGATCCCGATTCCGGCGGGGCATGGG
GATGCAGAGCATCAACGACACGGTCAGAGACGACCGCGATTCATCTACAG
AAGACATTGTGCGCAAGACGGACATGGAGCTGGCCGAGTTGGGCCACGGA
GTGTACCAGGAGACGACGATCGAGATTTCGCACGAGCCAGCGGAACCGGA
AGACTTCCAGAAGGGAGGTCGCCACAGCGGGTGAATGCTCGCTCTACTAC
GATTGTCACGGCTGCTAGGCAGCGATGGTGCTGGCCACACGCACCTCGCT
AGTCGCTCAAACACCGAGGTAGTTGAGGGTAGCGACCGAGCAGGGTTCAT
TGCCATGGGAGTGATTGCACTCATTTCGTTCATTTCGGCCCTTGGCCTGT
TGTCATTCCTTACCTACCGTTTCATTTTCTGGCGCAAATATTACAAACGG
CCTTTGGCGGAGAACCAATATGTCGTTCTCATTTACAACCTCCTGTTGGT
CGATCTGCAACAAGCAACAGCTTTCTTGATATGTCTCCACTGGATAACAA
AAGGTCACGTCTACTATCCCAGTGCACCATGCGTTCTTCAAGGATGGTGG
ATTCAAACGGGCGATCCCGGAAGTGGTTTGTTCGTTCTGGCGATTGCCTT
TCACACATGTGCCGTTGTGCTACGAGGTCGACAATTACCGTACCCAATAT
TTGTGGCTTGTGTTGTTGGGCTATGGATATTTATCATCATCCTGGGATTG
ATCCCCGTTGGAATGTTTGGCTCCGAGACCTTTGTGATTTCTGAAGCTGG
CTGGTGCTGGATCGGTCCCGACCATGAAACAGAACGTCTTTGGGTGCATT
ATCTCTGGATTTTCCTGGCAGAATTCGGCACGGTCGTTCTTTACGGAGTC
ATGTTTTTCTACTTGCGACGCCGAATGAAGCAAGCCGCCACGCTTCGACA
AAACCACCAGGAGAACCTGAAGCGATTGAACCGAGTTGTCATCTACATGG
TTATCTACCCGCTTGTCTATCTTTTGCTTTCCCTGCCGCTAGCCGCCGGA
CGTATGTCAACGGCCCGACATATCGTTCCCAGTCGAGCGTACTTTGCCGT
GGCCGGTTCGCTGATGGCGTTGTCGGGTTTCGTTGATGTGCTTGTGTACA
CGCTCACTCGCCGACACCTGTTGCTCGAAACCGAACTCAGTACTACGGAT
CGGATGTACAACTACACGGAATCGAACGCATATCAGACACACATCACCAC
GGGCCGAGATGGCAAGAAAGTACGGATGGGATCCCGATTCCGGCGGGGCA
TGGGGATGCAGAGCATCAACGACACGGTCAGAGACGACCGCGATTCATCT
ACAGAAGACATTGTGCGCAAGACGGACATGGAGCTGGCCGAGTTGGGCCA
CGGAGTGTACCAGGAGACGACGATCGAGATTTCGCACGAGCCAGCGGAAC
CGGAAGACTTCCAGAAGGGAGGTCGCCACAGCGGGTGAATGCTCGCTCTA
CTACGATTGTCACGGCTGCTAGGCAGCGATGGTGCTGGCCACACGCACCT
CGCTAGTCGCTCAAACACCGAGGTAGTTGAGGGTAGCGACCGAGCAGGGT
TCATTGCCATGGGAGTGATTGCACTCATTTCGTTCATTTCGGCCCTTGGC
CTGTTGTCATTCCTTACCTACCGTTTCATTTTCTGGCGCAAATATTACAA
ACGGCCTTTGGCGGAGAACCAATATGTCGTTCTCATTTACAACCTCCTGT
TGGTCGATCTGCAACAAGCAACAGCTTTCTTGATATGTCTCCACTGGATA
ACAAAAGGTCACGTCTACTATCCCAGTGCACCATGCGTTCTTCAAGGATG
GTGGATTCAAACGGGCGATCCCGGAAGTGGTTTGTTCGTTCTGGCGATTG
CCTTTCACACATGTGCCGTTGTGCTACGAGGTCGACAATTACCGTACCCA
ATATTTGTGGCTTGTGTTGTTGGGCTATGGATATTTATCATCATCCTGGG
ATTGATCCCCGTTGGAATGTTTGGCTCCGAGACCTTTGTGATTTCTGAAG
CTGGCTGG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006492KJC3_006492Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006492-T1KJC3_006492-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006492-T1.cdsKJC3_006492-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006492-T1.exon2KJC3_006492-T1.exon2Aspergillus niger KJC3exon
KJC3_006492-T1.exon1KJC3_006492-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR023041
DBxrefInterPro:IPR022596
DBxrefPFAM:PF11970
DBxrefPFAM:PF11710
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5864968..5866282 -
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