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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5872416..5875168+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006495-T1 ID=KJC3_006495-T1|Name=KJC3_006495-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2753bp|location=Sequence derived from alignment at ch4:5872416..5875168+ (Aspergillus niger KJC3)
GTGCTGCTGCTGCTTTCTTGCTGTCGCTGCTGCTTCGTCTCCATCTCCTG
TCACTCCACCCGTCCCACGGTTCGTACCTCTCTTTCCGTGGTATCTGTCG
CCACAGAGCCGTCCGTCTATCTACCTCTAGATAGCTGTCTAATCCGACAT
TCTTTTTGTTAAGCTTAAACTCGTCTGTGCACATTCTTTTCCCCCGCTCG
TCGCGTGGGTCAAGCCTTCGATATTAGATTGGGGCTTCTACCATAGCGAT
CATGGGCGACAATAACAATTCTTCATTCCTTTATGGTTATGCTTCATCCA
ACCGGTTCTACGGTTCGCCCGAACCTCCCTTCAACCCGAAGGCTGTGACA
CAAGCGAGCTGGACTCGACCGGAGCCAAAGCCTGAGTTAAAGGGACCGTT
GGTTGATCATGCCAATACCCTTCCTGATGTGGTATGTGCTTTGCGGCTCT
TTCTCAAAACTTTCCTTATTCAATGATTGCGTACTGATGATCTACACAAG
CAATGCAACACCCCGAGTGCCAAACCGCGATGGACGCCGATGAGCCCAAA
GACAAAAGGCCGTGTGGTCTATGGTCGCAAGGTACAGCTTGCGCTGCGCG
TGCTCGCTCTTGCCGGAGCTATTGGATCCCTTTTTTGTTCGATCGTTATC
AAGAATGCCGCGGTAACCGTGATATGGATTGTTAGAGTCGGGGTAAGTGA
TGCGATAAGACTATGTTACGTTGAGACAGCCTTTAACACCCTTCAAGCCA
GCTGTCGCAATTTTGCACACTCTCTACGGCATATATACTTTGAGTCGCTC
TTCTATTACAAGGCCTCCAGGATCGCAGGCTAGCTACATGTTCTTTGCCG
CAACATTCGATCTAGGCCTGATCCCATTCTACGTATTTTCGGCCTACCTG
GGTTACGGGCAATATACCGATAACGCATACGACTGGACTACAATGCTAGG
GTCTGATGTTGACATGACAACCAAGATCGCAGAGGCTACTTTCCTGTTGG
GTATAATCAACGGTGCACTCCATGCGATTTCCCTTGGAATATCTATCTTC
TTGGGTACCATCTTCCGGAAAATCACCCGACTACCCCCAGAAATGAACCC
GCTAGAAGACAACTTGACTGCACGTCCGTTTTCAAGAGCCAAGTCCGAAA
TAATTGAAAAACGTGCCAGCAAATCTACCTTGGGCTCAGACAACATCTCC
AGCGAAGACCCACTGATTGGTGTTCCGCGAAGTGTGCCTTTCATGGATAC
TCGCAGTAATCCACCCTTCAACAATGACTACAGCCGATTCCCCCCTACTT
TCGCAGACAGAACGCCACCGCAACACACGCGCTCTTTTCATCGCCCGTCA
CGCATCGACACCATCCCACATCTACCTTTCCATCAACCAAACGATATTGA
TGATGCTACAACTATCGCGTCACCCATCGAGAATCCGGATATCTTTACCA
GGGCAACTACGTCAATCCCGCGTGGTGCGCCAGTGCGCGAGCCATCCCCT
GACCTTCCCAACAGATCTCAATGTGTGAGCCCGGCTTCAGAGAATTGGAT
TGTCTATCCGTCCCGGTCTACGACTCCTGTGGAGGAAGCTAAGGATGAGC
ACCCAGCTCCTCGTGACCCATCCTCTGTATACAGCCGGGCCGAAACCCCA
GCCTCCTCTAAGGGCGGTGTTATGGATTGGTTCAGTCCACAACGATATGG
CCTGAATATAGGGGAGGATATCAGCGAGAATAAGCGTGGGGAATACGAGT
CGATCGCGGCGAATGAATTTTATGGAAACGACGATGACGTTCATGACATT
CTGTACCGAAGCGGATTCTACGATAATGCAGAGCAAGACCTTGGCGACCA
CCGGATTGACATCTTCCAAGATCACGAGGAGCTCGACGAAGACACGCGAA
ACTCCTTGAAGGTCAATCCATTAGCGCTGAACCCGCCCTCTCCCCTGCCG
AAGCCGGATGAGGTCCAAAACCGCACTCCAAGCAATGGGCGCATGGCCCT
CACTGACATTCCCAATCTCTCCCCCAAGCCTCCTGCCGAAGAGCCGCTTC
TTGATAGTCTGCAAAAGAAAGGAAGTTTCTATGGAGAGCTTCCGCACAGT
TTCGGACTTGATACTCCACGGAAAGTCAGCCACGACCAATCGAAGCTCAC
TCCAAAGAAGAACAAGCTCAACATCAAGAAAAGCCAGAAGTCTAACGCCT
ACGGCGCACTTAAGCAGCATGATGATGGTGATCTTAACGGCCTTGGCATT
CCTTATGCAGACCCTGTGGCTATCGATGGCGATCGTAAAGGTCGCGTCGT
TAGTAACTCCGGAGCTGATGCCACCCACGCTAACTCTTCATTGTCGTATG
GCAACTACATCGCTGGTCTGGGAGTGGGAAGACGGCGCGATGTCAGCGGC
AAGATGGCGGAAGAGGGCCGTGTCGAGACCAGCAAACCGAAAAATGAGAA
CGCAACACCAATCCGAGCGGCTGGATGGGCTCGCTTTGCGGGTCTATAGC
ACCAATAAGCTCGGAGCAGAAATTGCAAAAAAAAGGAAAAAACATCTACA
ACAATTTCAAGACGAAATACGTCTTTCTTTCATTGACTTTATGAAGCATA
TGGATATGGCTTGCACATGTTGGACATGAGGATCTTTTGACGATGATTGA
TGTGATTTTATATTTGTTTTATTGGTGATACTCCCCATTGTTTTACTGTA
GACAATTACAGGTAGTTACGTAGTAGCTTAGCATACCATACAAAGAATAT
TGC back to topCoding sequence (CDS) from alignment at ch4:5872416..5875168+ >KJC3_006495-T1 ID=KJC3_006495-T1|Name=KJC3_006495-T1|organism=Aspergillus niger KJC3|type=CDS|length=6372bp|location=Sequence derived from alignment at ch4:5872416..5875168+ (Aspergillus niger KJC3)
ATGGGCGACAATAACAATTCTTCATTCCTTTATGGTTATGCTTCATCCAA
CCGGTTCTACGGTTCGCCCGAACCTCCCTTCAACCCGAAGGCTGTGACAC
AAGCGAGCTGGACTCGACCGGAGCCAAAGCCTGAGTTAAAGGGACCGTTG
GTTGATCATGCCAATACCCTTCCTGATGTGCAATGCAACACCCCGAGTGC
CAAACCGCGATGGACGCCGATGAGCCCAAAGACAAAAGGCCGTGTGGTCT
ATGGTCGCAAGGTACAGCTTGCGCTGCGCGTGCTCGCTCTTGCCGGAGCT
ATTGGATCCCTTTTTTGTTCGATCGTTATCAAGAATGCCGCGGTAACCGT
GATATGGATTGTTAGAGTCGGGCCAGCTGTCGCAATTTTGCACACTCTCT
ACGGCATATATACTTTGAGTCGCTCTTCTATTACAAGGCCTCCAGGATCG
CAGGCTAGCTACATGTTCTTTGCCGCAACATTCGATCTAGGCCTGATCCC
ATTCTACGTATTTTCGGCCTACCTGGGTTACGGGCAATATACCGATAACG
CATACGACTGGACTACAATGCTAGGGTCTGATGTTGACATGACAACCAAG
ATCGCAGAGGCTACTTTCCTGTTGGGTATAATCAACGGTGCACTCCATGC
GATTTCCCTTGGAATATCTATCTTCTTGGGTACCATCTTCCGGAAAATCA
CCCGACTACCCCCAGAAATGAACCCGCTAGAAGACAACTTGACTGCACGT
CCGTTTTCAAGAGCCAAGTCCGAAATAATTGAAAAACGTGCCAGCAAATC
TACCTTGGGCTCAGACAACATCTCCAGCGAAGACCCACTGATTGGTGTTC
CGCGAAGTGTGCCTTTCATGGATACTCGCAGTAATCCACCCTTCAACAAT
GACTACAGCCGATTCCCCCCTACTTTCGCAGACAGAACGCCACCGCAACA
CACGCGCTCTTTTCATCGCCCGTCACGCATCGACACCATCCCACATCTAC
CTTTCCATCAACCAAACGATATTGATGATGCTACAACTATCGCGTCACCC
ATCGAGAATCCGGATATCTTTACCAGGGCAACTACGTCAATCCCGCGTGG
TGCGCCAGTGCGCGAGCCATCCCCTGACCTTCCCAACAGATCTCAATGTG
TGAGCCCGGCTTCAGAGAATTGGATTGTCTATCCGTCCCGGTCTACGACT
CCTGTGGAGGAAGCTAAGGATGAGCACCCAGCTCCTCGTGACCCATCCTC
TGTATACAGCCGGGCCGAAACCCCAGCCTCCTCTAAGGGCGGTGTTATGG
ATTGGTTCAGTCCACAACGATATGGCCTGAATATAGGGGAGGATATCAGC
GAGAATAAGCGTGGGGAATACGAGTCGATCGCGGCGAATGAATTTTATGG
AAACGACGATGACGTTCATGACATTCTGTACCGAAGCGGATTCTACGATA
ATGCAGAGCAAGACCTTGGCGACCACCGGATTGACATCTTCCAAGATCAC
GAGGAGCTCGACGAAGACACGCGAAACTCCTTGAAGGTCAATCCATTAGC
GCTGAACCCGCCCTCTCCCCTGCCGAAGCCGGATGAGGTCCAAAACCGCA
CTCCAAGCAATGGGCGCATGGCCCTCACTGACATTCCCAATCTCTCCCCC
AAGCCTCCTGCCGAAGAGCCGCTTCTTGATAGTCTGCAAAAGAAAGGAAG
TTTCTATGGAGAGCTTCCGCACAGTTTCGGACTTGATACTCCACGGAAAG
TCAGCCACGACCAATCGAAGCTCACTCCAAAGAAGAACAAGCTCAACATC
AAGAAAAGCCAGAAGTCTAACGCCTACGGCGCACTTAAGCAGCATGATGA
TGGTGATCTTAACGGCCTTGGCATTCCTTATGCAGACCCTGTGGCTATCG
ATGGCGATCGTAAAGGTCGCGTCGTTAGTAACTCCGGAGCTGATGCCACC
CACGCTAACTCTTCATTGTCGTATGGCAACTACATCGCTGGTCTGGGAGT
GGGAAGACGGCGCGATGTCAGCGGCAAGATGGCGGAAGAGGGCCGTGTCG
AGACCAGCAAACCGAAAAATGAGAACGCAACACCAATCCGAGCGGCTGGA
TGGGCTCGCTTTGCGGGTCTATAGATGGGCGACAATAACAATTCTTCATT
CCTTTATGGTTATGCTTCATCCAACCGGTTCTACGGTTCGCCCGAACCTC
CCTTCAACCCGAAGGCTGTGACACAAGCGAGCTGGACTCGACCGGAGCCA
AAGCCTGAGTTAAAGGGACCGTTGGTTGATCATGCCAATACCCTTCCTGA
TGTGCAATGCAACACCCCGAGTGCCAAACCGCGATGGACGCCGATGAGCC
CAAAGACAAAAGGCCGTGTGGTCTATGGTCGCAAGGTACAGCTTGCGCTG
CGCGTGCTCGCTCTTGCCGGAGCTATTGGATCCCTTTTTTGTTCGATCGT
TATCAAGAATGCCGCGGTAACCGTGATATGGATTGTTAGAGTCGGGCCAG
CTGTCGCAATTTTGCACACTCTCTACGGCATATATACTTTGAGTCGCTCT
TCTATTACAAGGCCTCCAGGATCGCAGGCTAGCTACATGTTCTTTGCCGC
AACATTCGATCTAGGCCTGATCCCATTCTACGTATTTTCGGCCTACCTGG
GTTACGGGCAATATACCGATAACGCATACGACTGGACTACAATGCTAGGG
TCTGATGTTGACATGACAACCAAGATCGCAGAGGCTACTTTCCTGTTGGG
TATAATCAACGGTGCACTCCATGCGATTTCCCTTGGAATATCTATCTTCT
TGGGTACCATCTTCCGGAAAATCACCCGACTACCCCCAGAAATGAACCCG
CTAGAAGACAACTTGACTGCACGTCCGTTTTCAAGAGCCAAGTCCGAAAT
AATTGAAAAACGTGCCAGCAAATCTACCTTGGGCTCAGACAACATCTCCA
GCGAAGACCCACTGATTGGTGTTCCGCGAAGTGTGCCTTTCATGGATACT
CGCAGTAATCCACCCTTCAACAATGACTACAGCCGATTCCCCCCTACTTT
CGCAGACAGAACGCCACCGCAACACACGCGCTCTTTTCATCGCCCGTCAC
GCATCGACACCATCCCACATCTACCTTTCCATCAACCAAACGATATTGAT
GATGCTACAACTATCGCGTCACCCATCGAGAATCCGGATATCTTTACCAG
GGCAACTACGTCAATCCCGCGTGGTGCGCCAGTGCGCGAGCCATCCCCTG
ACCTTCCCAACAGATCTCAATGTGTGAGCCCGGCTTCAGAGAATTGGATT
GTCTATCCGTCCCGGTCTACGACTCCTGTGGAGGAAGCTAAGGATGAGCA
CCCAGCTCCTCGTGACCCATCCTCTGTATACAGCCGGGCCGAAACCCCAG
CCTCCTCTAAGGGCGGTGTTATGGATTGGTTCAGTCCACAACGATATGGC
CTGAATATAGGGGAGGATATCAGCGAGAATAAGCGTGGGGAATACGAGTC
GATCGCGGCGAATGAATTTTATGGAAACGACGATGACGTTCATGACATTC
TGTACCGAAGCGGATTCTACGATAATGCAGAGCAAGACCTTGGCGACCAC
CGGATTGACATCTTCCAAGATCACGAGGAGCTCGACGAAGACACGCGAAA
CTCCTTGAAGGTCAATCCATTAGCGCTGAACCCGCCCTCTCCCCTGCCGA
AGCCGGATGAGGTCCAAAACCGCACTCCAAGCAATGGGCGCATGGCCCTC
ACTGACATTCCCAATCTCTCCCCCAAGCCTCCTGCCGAAGAGCCGCTTCT
TGATAGTCTGCAAAAGAAAGGAAGTTTCTATGGAGAGCTTCCGCACAGTT
TCGGACTTGATACTCCACGGAAAGTCAGCCACGACCAATCGAAGCTCACT
CCAAAGAAGAACAAGCTCAACATCAAGAAAAGCCAGAAGTCTAACGCCTA
CGGCGCACTTAAGCAGCATGATGATGGTGATCTTAACGGCCTTGGCATTC
CTTATGCAGACCCTGTGGCTATCGATGGCGATCGTAAAGGTCGCGTCGTT
AGTAACTCCGGAGCTGATGCCACCCACGCTAACTCTTCATTGTCGTATGG
CAACTACATCGCTGGTCTGGGAGTGGGAAGACGGCGCGATGTCAGCGGCA
AGATGGCGGAAGAGGGCCGTGTCGAGACCAGCAAACCGAAAAATGAGAAC
GCAACACCAATCCGAGCGGCTGGATGGGCTCGCTTTGCGGGTCTATAGAT
GGGCGACAATAACAATTCTTCATTCCTTTATGGTTATGCTTCATCCAACC
GGTTCTACGGTTCGCCCGAACCTCCCTTCAACCCGAAGGCTGTGACACAA
GCGAGCTGGACTCGACCGGAGCCAAAGCCTGAGTTAAAGGGACCGTTGGT
TGATCATGCCAATACCCTTCCTGATGTGCAATGCAACACCCCGAGTGCCA
AACCGCGATGGACGCCGATGAGCCCAAAGACAAAAGGCCGTGTGGTCTAT
GGTCGCAAGGTACAGCTTGCGCTGCGCGTGCTCGCTCTTGCCGGAGCTAT
TGGATCCCTTTTTTGTTCGATCGTTATCAAGAATGCCGCGGTAACCGTGA
TATGGATTGTTAGAGTCGGGCCAGCTGTCGCAATTTTGCACACTCTCTAC
GGCATATATACTTTGAGTCGCTCTTCTATTACAAGGCCTCCAGGATCGCA
GGCTAGCTACATGTTCTTTGCCGCAACATTCGATCTAGGCCTGATCCCAT
TCTACGTATTTTCGGCCTACCTGGGTTACGGGCAATATACCGATAACGCA
TACGACTGGACTACAATGCTAGGGTCTGATGTTGACATGACAACCAAGAT
CGCAGAGGCTACTTTCCTGTTGGGTATAATCAACGGTGCACTCCATGCGA
TTTCCCTTGGAATATCTATCTTCTTGGGTACCATCTTCCGGAAAATCACC
CGACTACCCCCAGAAATGAACCCGCTAGAAGACAACTTGACTGCACGTCC
GTTTTCAAGAGCCAAGTCCGAAATAATTGAAAAACGTGCCAGCAAATCTA
CCTTGGGCTCAGACAACATCTCCAGCGAAGACCCACTGATTGGTGTTCCG
CGAAGTGTGCCTTTCATGGATACTCGCAGTAATCCACCCTTCAACAATGA
CTACAGCCGATTCCCCCCTACTTTCGCAGACAGAACGCCACCGCAACACA
CGCGCTCTTTTCATCGCCCGTCACGCATCGACACCATCCCACATCTACCT
TTCCATCAACCAAACGATATTGATGATGCTACAACTATCGCGTCACCCAT
CGAGAATCCGGATATCTTTACCAGGGCAACTACGTCAATCCCGCGTGGTG
CGCCAGTGCGCGAGCCATCCCCTGACCTTCCCAACAGATCTCAATGTGTG
AGCCCGGCTTCAGAGAATTGGATTGTCTATCCGTCCCGGTCTACGACTCC
TGTGGAGGAAGCTAAGGATGAGCACCCAGCTCCTCGTGACCCATCCTCTG
TATACAGCCGGGCCGAAACCCCAGCCTCCTCTAAGGGCGGTGTTATGGAT
TGGTTCAGTCCACAACGATATGGCCTGAATATAGGGGAGGATATCAGCGA
GAATAAGCGTGGGGAATACGAGTCGATCGCGGCGAATGAATTTTATGGAA
ACGACGATGACGTTCATGACATTCTGTACCGAAGCGGATTCTACGATAAT
GCAGAGCAAGACCTTGGCGACCACCGGATTGACATCTTCCAAGATCACGA
GGAGCTCGACGAAGACACGCGAAACTCCTTGAAGGTCAATCCATTAGCGC
TGAACCCGCCCTCTCCCCTGCCGAAGCCGGATGAGGTCCAAAACCGCACT
CCAAGCAATGGGCGCATGGCCCTCACTGACATTCCCAATCTCTCCCCCAA
GCCTCCTGCCGAAGAGCCGCTTCTTGATAGTCTGCAAAAGAAAGGAAGTT
TCTATGGAGAGCTTCCGCACAGTTTCGGACTTGATACTCCACGGAAAGTC
AGCCACGACCAATCGAAGCTCACTCCAAAGAAGAACAAGCTCAACATCAA
GAAAAGCCAGAAGTCTAACGCCTACGGCGCACTTAAGCAGCATGATGATG
GTGATCTTAACGGCCTTGGCATTCCTTATGCAGACCCTGTGGCTATCGAT
GGCGATCGTAAAGGTCGCGTCGTTAGTAACTCCGGAGCTGATGCCACCCA
CGCTAACTCTTCATTGTCGTATGGCAACTACATCGCTGGTCTGGGAGTGG
GAAGACGGCGCGATGTCAGCGGCAAGATGGCGGAAGAGGGCCGTGTCGAG
ACCAGCAAACCGAAAAATGAGAACGCAACACCAATCCGAGCGGCTGGATG
GGCTCGCTTTGCGGGTCTATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006495-T1.utr3p1 | KJC3_006495-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5872416..5875168 + |
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