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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5879823..5884135- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006498-T1 ID=KJC3_006498-T1|Name=KJC3_006498-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4313bp|location=Sequence derived from alignment at ch4:5879823..5884135- (Aspergillus niger KJC3)
AGCCAGTCAGTCAAGCTAGTCTAGTCGAACTTTCAGCTGAGCAAAATGGC
TGGAATGCGCCAGTCTCTGCCCGTCTTCGGGTCATGCCATCCAACCAGAT
GCCGACCCGATGTGAAGAAACGAAAAAAAACAACCAACCAACTATCCCGA
CATCTAATCTGACAGGGAGGTCCTGTCACTCTGCAGGTAAGCATTCCTCT
CCTCCCCCGTCTCCAACCAATGTTTGCGATTGATGTGTTCATCATCCGGA
GAAAATCAAACACGACTAACCGAACTACCCCCTCTTGAGGCCTCTAGTTC
GCTCATCAACCGACAACCGTTGCCCGGAAAGTGGGGACCGTAAGGTTTGG
CTCAGTTCAGGGGCATCAACATTGACTCTGCAATTTCATTATGGTTTCTC
TCCCCCGAGGGAGGAGTGGATATGTTGGGTTGGGTGATCAACTTCGGTGG
CGGGAGAGATGCAGGTCGCGTTCACATCACATACTATCCATCTTTTGTGC
GAATCTACTCCAGACTGATCCCTCTTTCTCTCTCCGGCCCATCCCCAGCT
CAGCTCATCCCCCTCCCCTCCACTCAGGGGGTTCGCTTGCGCGCGCAGAC
CGTTTCAGATCTGCTTGTCATCACCACTAGCCCTCTAGTCGCTGGCTAGG
CCCGACGGGGCAGGTTCTATGGACGGGCAATCAATAATCTAATTTAATCC
CAGAAACTTTGCGCTGCTGGCCTGCCTGGAGCCTGTTTCGTCTTGTTTCG
CGTTGGTCCGTTTTTTCTTTGTCACACTTCCATCTCCTCCTTCTCTTTTC
TCGTTCACACAATCACTCTCATACACATTACTACTTCTTCTTCAATTCCT
CTTCTCTCTTTCGCTCCCTGGGTCTTTTCGTAATCTATTGTCTACGGGCC
TCCACACTCCAATTGCCGACTATGACGTGTGTCTGACTCCCAATCGCTTT
CCCTGATTTGGTTGTCTGTTGATCCCACACGGCCACTTCGTCACTCCCTG
TCGCGCACGCCCCAAGACAAGATCTCGAGTTTAATTCGTATTCACCGTCC
ACCAAGGATTCACGCTGGGTGTATTTCACCCCATCTGTCCGAGGTCTCTC
CTTTTTAAACAAGTTTTGCTGTCCCCTACACGGTCGGGCATGATCTATGC
TTGAATTAGCATCGTCAACTTGCGATGACAAATTTCTCATTTTCGAGCAC
TCTAGTCTTTCTTTATCAATCAATGAGACCCTCATTGGTAACCCAAATCT
TCGATCTCTCCCTTCGTTAATTATACCCAACCCTACTGCCATCAATTGAT
GCGCGTGATTTTTGTTTACTATATACCCATTCAACCATCTCAAAATAGAC
CGCAGGAAATCCGACGTCCGCCTTCGGGACATACAGTGGAGGTCTGACCA
AGGATGACCTTAGGAATTCACTCCCCTCAACAATCGGTCAGCGAGCGCAG
AGGCCAGCGATTGGCCCCTCTACAAACCAACTTCAGTCGTCCTACCGCAC
GTCCGGTGGAGGTTCCACCCGGCCGACCACAGCGCCCACGGCCCACAGAC
TACCAGGGTGATGCGGAGGCAGGTGAACGAGTCCCATTGCAGGCCACGCC
GGTTAAGCGTCAAACTTCCAAGTCCAGCCTGCGGAACATCTTCGGACGCG
ACAAGTCTTCCCGAAAGCAAGCCAGCGATGCTAAGCTCACGGGCATCGAT
GAGTTGCAACAACAAAGCACACAACCTGCAACCGAAGCAGCTCCGGTAAT
TCAATCACCCACAGCTGCTGCCACACCGAAGACCACCGTTTCGACGGCTA
CGCTCTCCACATCGCCGATAACGACGGGGTCACAACAGTCTAGGCTTCCG
TCCAAATCTCGTACGAAAACAGGTAACGAGAAGCCTGCCGGGGGTGATAT
AGGATGGAAACCTCCACCACTCTTTCAGGCGTATCCGCAGGCCATCAAGC
ATGACACTCTTCCAGTCCCCGCCATGTCGGTGGATTCCATCATGCGCATG
CATGCCACATCAAAGGCTAAAGCTGGCGCTCGTGAAGAAGAGCCCGCCAA
CGGGGAATTGACGGAGGATGGCGCGGCTCGGAAGAAAAAGGAAGACAAGG
AGAGAAAACGGCATATGCGCACCCTCTCCGAGACCATGAATAAAGCAGAC
TGGACCCAGAAAGTCTATGTGCTGGCCACCGCTGGCTATATATTACAATA
TTCCGGCTCAGGGAAATACGACAGGCTGCCGGAGAAAATGTTACAGCTCG
GTCCTCGGACTGTAGCCTTTGCTAGCGATGCGATTCCTGGAAAGCATTGG
GTGCTGCAGGTATCGCATACCGACGAAGACGGCACGGATTCGACTAAGCC
TTCCCGGTTTCGCTTCGGGTTTCACAGGTCGCCAGCCCGGCGGCTTGAGC
GTTGCTTCCTTCTTGTATTCGACCACCCCGAGGATATGAGCTCTTGGCTC
TTGGCCGTTCGGGCTCAGATCGAAGCACGAGGGGGTAAGAAGTATGTTTC
GGAAAAGGCAGCCGATGATGGGGAAGAGCCTCAGCTTCAGACTAAGCCCA
GTATCCGCCAAATGGTGACCAAAGATCCAAACCGGTTTTCCATGCTACTG
AAACCTCAACAGTCTGTGTCTGAGGAAGACAAGGACACAGGTGTCAGCGT
TAGCGACCAATCCCGTCGGAGCTCCTACATCTCTCTCAATCGCCGGTCGA
TAGTCATGCCGGCTGCATCAGAATCCCGCTCAGGCTCTATATCCACCACA
CATACAGAAATAACATCTCCTGTGAGCGGTACGGGACGATTCTACTCGTC
TATTCCCAGCGCAAGTGTCCCCAGTTCGCCACCCAACGGTGGTATGGTAG
CAGCATCTTTAGACGGCACAGCAAGTCCAAGCGTCAAAAGCTCAACGAAG
CGTCGGTCGTTGAACATATCGTCGCCATCAACGATCAAGACCGCCGCCGA
GATGGCTGCTGAGATCCCACGGGCACAATCGACACAACCGGATCCAGTGC
TCCGCAGCACCTCGCCGCCCGCACCTAACTTCAGCGTCCCGTCTTTCAGC
AAGAGATTCACTGCCCGATTTGGTCCACTTCAGGTCCCCCAGGTCTCTCA
GGCTCCCCCAGCCGTGGAGGATGCAAGCAGCAAAAGTACTGTTGCTGCTC
TTTCTGCATTTCCTTCTCCACCCCAATCTCCAGGCAAGGTTCCGAACGGC
TTCCTACCGGAGGAGCCCAGCGAGGAGCAGCAACAACCGCAAGAGCTAGA
GCCGCAACCGAAGAAGCCGTGGCCACTCCATGCAGGTCAACCTAAGAGAC
CACCACTGCGCGTTTCCACTTCTCAAGACTCGCTAGCCGATAATCAGCGT
ATAGCGGATCCCAGAAACAATCGTCTCTCTCGGATGCCTCGAAGCATACA
ACCCAGTACAGCAGCCCAAGTCCTGCGTCCAACAACTGCTGTCAGCGGAG
GGCCGAATACCACGTTGCTTGTGGGCTCAGACGCACGTCGTGATCAGCAG
CGGACCCGAGGATCTGTTATGTACCAACCAGATCCAAACACCCGTCTGCC
CCCAGTGGCCATGGGTCGCCGGAAGAGTATGCCAGGGCTGATCGGACCGC
CAGCTGCACCACCCCCCAACTGTCCACTGCCCAAGATCCCTTCTCCAGTC
GACCCACAATCGTCCAACTGGGGTGATGCACCCGCCGACCTCCGACAGTG
CATCTCGCCTTCCCCGCTACATACTATCCGGGAACAGCGCAAGAGTTCCG
CTCCAATTCCAGCCGGCCACGGCATGCAAAGTCGGAGCGTGTCCCGGCAT
TCCAGAATGCCGCAGATCTAATCTGTCAGCCTCTAATCACTCCTTACTAT
ACATACATTCGCCCATTCGCATGATGAACCCTTGCATGCCTTGTACATGT
TCATCCTATCCTATCTCTACACATTATGCTTCCACGTCGCCACGGCACGA
CTTGCTTCCGTCGACTTTGACAGTCGACGATGTCGATCATCGTATCATTA
CATAGCGATCCAGCGTTGTTCTATCTTCTTTCTTTCTGATTTACTCCCTC
TTATTATACATCCTGATACCATTCGTGAATGTACTGGCAGATATGTCGAC
TATTACCATCTACTACCCAACAGGCTACTACTACTTTTTCCTTTTTATGC
ATTACTCCTGACAAAACGATAGACGTGGCGGCACTCTGTTTTGTGACTCA
TTCTACTTCACTTTCTGAGATTGTATTCTATTTACTTTTATCATATACAG
GCTGTTATACAGTGATCCCAGAGCGAATATACTAGATAATAATACAAAAC
GGGGATCTACTAC back to topCoding sequence (CDS) from alignment at ch4:5879823..5884135- >KJC3_006498-T1 ID=KJC3_006498-T1|Name=KJC3_006498-T1|organism=Aspergillus niger KJC3|type=CDS|length=2418bp|location=Sequence derived from alignment at ch4:5879823..5884135- (Aspergillus niger KJC3)
ATGACCTTAGGAATTCACTCCCCTCAACAATCGGTCAGCGAGCGCAGAGG
CCAGCGATTGGCCCCTCTACAAACCAACTTCAGTCGTCCTACCGCACGTC
CGGTGGAGGTTCCACCCGGCCGACCACAGCGCCCACGGCCCACAGACTAC
CAGGGTGATGCGGAGGCAGGTGAACGAGTCCCATTGCAGGCCACGCCGGT
TAAGCGTCAAACTTCCAAGTCCAGCCTGCGGAACATCTTCGGACGCGACA
AGTCTTCCCGAAAGCAAGCCAGCGATGCTAAGCTCACGGGCATCGATGAG
TTGCAACAACAAAGCACACAACCTGCAACCGAAGCAGCTCCGGTAATTCA
ATCACCCACAGCTGCTGCCACACCGAAGACCACCGTTTCGACGGCTACGC
TCTCCACATCGCCGATAACGACGGGGTCACAACAGTCTAGGCTTCCGTCC
AAATCTCGTACGAAAACAGGTAACGAGAAGCCTGCCGGGGGTGATATAGG
ATGGAAACCTCCACCACTCTTTCAGGCGTATCCGCAGGCCATCAAGCATG
ACACTCTTCCAGTCCCCGCCATGTCGGTGGATTCCATCATGCGCATGCAT
GCCACATCAAAGGCTAAAGCTGGCGCTCGTGAAGAAGAGCCCGCCAACGG
GGAATTGACGGAGGATGGCGCGGCTCGGAAGAAAAAGGAAGACAAGGAGA
GAAAACGGCATATGCGCACCCTCTCCGAGACCATGAATAAAGCAGACTGG
ACCCAGAAAGTCTATGTGCTGGCCACCGCTGGCTATATATTACAATATTC
CGGCTCAGGGAAATACGACAGGCTGCCGGAGAAAATGTTACAGCTCGGTC
CTCGGACTGTAGCCTTTGCTAGCGATGCGATTCCTGGAAAGCATTGGGTG
CTGCAGGTATCGCATACCGACGAAGACGGCACGGATTCGACTAAGCCTTC
CCGGTTTCGCTTCGGGTTTCACAGGTCGCCAGCCCGGCGGCTTGAGCGTT
GCTTCCTTCTTGTATTCGACCACCCCGAGGATATGAGCTCTTGGCTCTTG
GCCGTTCGGGCTCAGATCGAAGCACGAGGGGGTAAGAAGTATGTTTCGGA
AAAGGCAGCCGATGATGGGGAAGAGCCTCAGCTTCAGACTAAGCCCAGTA
TCCGCCAAATGGTGACCAAAGATCCAAACCGGTTTTCCATGCTACTGAAA
CCTCAACAGTCTGTGTCTGAGGAAGACAAGGACACAGGTGTCAGCGTTAG
CGACCAATCCCGTCGGAGCTCCTACATCTCTCTCAATCGCCGGTCGATAG
TCATGCCGGCTGCATCAGAATCCCGCTCAGGCTCTATATCCACCACACAT
ACAGAAATAACATCTCCTGTGAGCGGTACGGGACGATTCTACTCGTCTAT
TCCCAGCGCAAGTGTCCCCAGTTCGCCACCCAACGGTGGTATGGTAGCAG
CATCTTTAGACGGCACAGCAAGTCCAAGCGTCAAAAGCTCAACGAAGCGT
CGGTCGTTGAACATATCGTCGCCATCAACGATCAAGACCGCCGCCGAGAT
GGCTGCTGAGATCCCACGGGCACAATCGACACAACCGGATCCAGTGCTCC
GCAGCACCTCGCCGCCCGCACCTAACTTCAGCGTCCCGTCTTTCAGCAAG
AGATTCACTGCCCGATTTGGTCCACTTCAGGTCCCCCAGGTCTCTCAGGC
TCCCCCAGCCGTGGAGGATGCAAGCAGCAAAAGTACTGTTGCTGCTCTTT
CTGCATTTCCTTCTCCACCCCAATCTCCAGGCAAGGTTCCGAACGGCTTC
CTACCGGAGGAGCCCAGCGAGGAGCAGCAACAACCGCAAGAGCTAGAGCC
GCAACCGAAGAAGCCGTGGCCACTCCATGCAGGTCAACCTAAGAGACCAC
CACTGCGCGTTTCCACTTCTCAAGACTCGCTAGCCGATAATCAGCGTATA
GCGGATCCCAGAAACAATCGTCTCTCTCGGATGCCTCGAAGCATACAACC
CAGTACAGCAGCCCAAGTCCTGCGTCCAACAACTGCTGTCAGCGGAGGGC
CGAATACCACGTTGCTTGTGGGCTCAGACGCACGTCGTGATCAGCAGCGG
ACCCGAGGATCTGTTATGTACCAACCAGATCCAAACACCCGTCTGCCCCC
AGTGGCCATGGGTCGCCGGAAGAGTATGCCAGGGCTGATCGGACCGCCAG
CTGCACCACCCCCCAACTGTCCACTGCCCAAGATCCCTTCTCCAGTCGAC
CCACAATCGTCCAACTGGGGTGATGCACCCGCCGACCTCCGACAGTGCAT
CTCGCCTTCCCCGCTACATACTATCCGGGAACAGCGCAAGAGTTCCGCTC
CAATTCCAGCCGGCCACGGCATGCAAAGTCGGAGCGTGTCCCGGCATTCC
AGAATGCCGCAGATCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006498-T1.utr3p1 | KJC3_006498-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5879823..5884135 - |
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