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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5891272..5893865+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006502-T1 ID=KJC3_006502-T1|Name=KJC3_006502-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2594bp|location=Sequence derived from alignment at ch4:5891272..5893865+ (Aspergillus niger KJC3)
ATGGGGTACTGCTATACCAAGAGCCCAGCACCGAGGCCATTTCCTCCTGG
TGGCTTCTGTGTGGTCGGGTAGTGCCGCCATCCCACTCTCAAGGTTGGTT
AAGACTTGACGCCAAGATGGTGTGGCGGACGATCCCCTGGTAAGCAGGCA
AAATCGACTGTTGAGTGTAGAAAGTACTGCCCGGTGAGTCGGGTTCTCTC
TGCAGAGACGTTCAAGTCCCAGCAAGCATTCCTCAGGAAGGGGGCAACAG
AATGTTCGATTGCATGGTGCTGCGATATCACTTAGGCTTTTTATCCACTG
TCAACCACTGAGAAAATTCCCCGAAACATTCAGATCGATCTGTTCACGTG
CGTGGGGGTTGAAGTGGTATTCGGGAGATGACCGAAAGCCGGACCGGCTT
TGCAATACCGTTTCCAGGGAAGAAGCGACTCCAGTCTTTCCCCGGGCCAG
ACCGATTTGGTGCCGGATCCAGTATCTCGTGAACTAGACCGAATCTAGGC
ATCCCGTGACCATCGACCCGTCAGCAAAGCGTCAGTCTGACTTGAACACT
TCGATGTTGACCGCCTTCAGTTGCAGGAATGCGGCACGCCGGCTCCAGCT
CTGCAATCCACTGCAACCAAACCCATTGTTTGAACCAACCGGCCCGTGGC
AGCAAGTGGTCGCAGACAGACACACTGTTCAGATAACGGTTCTTGACAGA
AAGTGGTGGTTTGAGCTATTCAGTTGGACCTTTCTCATCAACAGACCCAC
TGTTATCCATTGGCCGGCCCCCTTTAACCTGCCCCCCTCAAGTCATGTCG
CCCGATATCAACTCTCTGTCCCCGACCTGGTCCACTGCCTCTTCCCCGCG
TCAACGTCGGCTGCCCCCGACTTTATCTGATAACTTATCGTCGCAGCATA
CCCAGCCAGACTTTCCTTCTGCAGCCCTGCCCAACATGAATAACGGTTCA
TCAAATAACCATAGCAACATCATAGCCACCGATCTGCCTCATCGGCCCTC
TCATAGTCACCGCTCCAGCATGTCAGGATCGGAACGCCGTCGGTCCCGTA
CCGGTTCCAGTTCAATCCTGAACAATGGCCATACCAACGCTAGTGACTCG
GCCCCCGGGGAACCGACCACAACCCCCCACGACCACCACCGGTCTTCCTT
TGGCCATAACGGGCTTCGCACCTCCAGTCCGCTCAGTAATGTCGGGGGAA
ACCCGACCGTTGCCACCGGGGACCCGCATCATCAACGTGCACCGTCCCTG
GGGGAGCTCCATCAGGAACTAGAACAAGAACAAGAAGCACAAGTGGTATG
ATCCAACTATTGTTTGTGCCACTATTCGGCGCATTCTTCGTTGCTATCGC
ACCACCATGAGTAAGAGGAAACCACTAACCACGATCCTTGCAAATGGCTA
GAACCGTCTTTTACACATGATCCGAAGCCAGCAAGCTCAGCTGCAGCACC
TTCAACAGCAACAGCAACACTCACAGGCCGTGGTGGATGACTCTGGTCCT
GCTGCGGAACGGCTGACCCCATTCCCCCCAATTCCCCCGCTCCCCACAAC
CAGCAGTCGGGCGTCAACCCAATTGCCTTCCTCCTTGTCCAGCCGGCGAC
CCTCCCGCCCGTCTAGTCAAGCCGCTTCACCCAATCTCCGACCGCTGGCC
GAGCCGTCGTGCGGGTCAGAGGGTCCGGATTGGAGTGCAGGCCCCGGTGA
GAGCCCAGCGCGGCGGGGAAGCAGGGATGAGAGCGCATTTTACCAGGCGG
AGGCAGCGATGCTGACGCGCGAAAATCAAATGCTCCGACAGCGAATCCGC
GATTTAGGTGCGCGATTTCCCTTCCCCCCTCCTTCATTACTATTCTTCAT
ATCCTTTTCCTCCCCTATTACTGAGGCGCACGGAGCCTCAATAGAAGCCT
CTACTTAGAGTTTTGCGCTGACGGCGTATAGAACGCCAAGTTAGTGAGCT
GACCTCTGGTGCCCGATCCAGCGAGATCCCTGCGGCACCTACCGCACAAG
GAACCGAGGCCGTAGATCACCCAGCGTCCGCAGGAGTGGGATCGGCGAAC
GAGTCGTCAGACAAGACCTGATTGACCAAGAGCCACATGGGAGGCTTTTT
ATTCCTAACACTTTGTTTTCTTACGGTGTATCTGTGAATTACGGAGTGCA
TTCTTCCCGGTCAGCAGTGATCAGCATGTTCTTGTGATGGATGAAAAAGC
CACGTTCGGTATCTGAGCGGGAGTTCATGCGCAGCAAAATAAAATATACC
TCCACGATGCTTGTCTGCGCATGATCATTAAACATGTCTACATATCGTTG
TAGTGGCTGTGCGGTGGGCATATGATTTTTCGAAACATCAACTCCCGTAA
TTAGCCGCGTGTACTGAGGCCCCCGGTGTGTGGGGTACATACCTGTCCAC
TAAGTGATAAGTGCAGGGGAAGTGAAAAGAATGCGTGACCACCCCCAGCT
TGCCCAATGAAGACAGACAAACCTTTTGTCCTATGTACGGAGTACAGTCA
CATAGTACATACATTAGTGCATACGTTGGAAGTCATCTCCATCTCCACGG
GGGCCCGCCACGCGGTCTTTTCCCTTGCTCGAAAGTCAAATGTC back to topCoding sequence (CDS) from alignment at ch4:5891272..5893865+ >KJC3_006502-T1 ID=KJC3_006502-T1|Name=KJC3_006502-T1|organism=Aspergillus niger KJC3|type=CDS|length=3141bp|location=Sequence derived from alignment at ch4:5891272..5893865+ (Aspergillus niger KJC3)
ATGTCGCCCGATATCAACTCTCTGTCCCCGACCTGGTCCACTGCCTCTTC
CCCGCGTCAACGTCGGCTGCCCCCGACTTTATCTGATAACTTATCGTCGC
AGCATACCCAGCCAGACTTTCCTTCTGCAGCCCTGCCCAACATGAATAAC
GGTTCATCAAATAACCATAGCAACATCATAGCCACCGATCTGCCTCATCG
GCCCTCTCATAGTCACCGCTCCAGCATGTCAGGATCGGAACGCCGTCGGT
CCCGTACCGGTTCCAGTTCAATCCTGAACAATGGCCATACCAACGCTAGT
GACTCGGCCCCCGGGGAACCGACCACAACCCCCCACGACCACCACCGGTC
TTCCTTTGGCCATAACGGGCTTCGCACCTCCAGTCCGCTCAGTAATGTCG
GGGGAAACCCGACCGTTGCCACCGGGGACCCGCATCATCAACGTGCACCG
TCCCTGGGGGAGCTCCATCAGGAACTAGAACAAGAACAAGAAGCACAAGT
GAACCGTCTTTTACACATGATCCGAAGCCAGCAAGCTCAGCTGCAGCACC
TTCAACAGCAACAGCAACACTCACAGGCCGTGGTGGATGACTCTGGTCCT
GCTGCGGAACGGCTGACCCCATTCCCCCCAATTCCCCCGCTCCCCACAAC
CAGCAGTCGGGCGTCAACCCAATTGCCTTCCTCCTTGTCCAGCCGGCGAC
CCTCCCGCCCGTCTAGTCAAGCCGCTTCACCCAATCTCCGACCGCTGGCC
GAGCCGTCGTGCGGGTCAGAGGGTCCGGATTGGAGTGCAGGCCCCGGTGA
GAGCCCAGCGCGGCGGGGAAGCAGGGATGAGAGCGCATTTTACCAGGCGG
AGGCAGCGATGCTGACGCGCGAAAATCAAATGCTCCGACAGCGAATCCGC
GATTTAGAACGCCAAGTTAGTGAGCTGACCTCTGGTGCCCGATCCAGCGA
GATCCCTGCGGCACCTACCGCACAAGGAACCGAGGCCGTAGATCACCCAG
CGTCCGCAGGAGTGGGATCGGCGAACGAGTCGTCAGACAAGACCTGAATG
TCGCCCGATATCAACTCTCTGTCCCCGACCTGGTCCACTGCCTCTTCCCC
GCGTCAACGTCGGCTGCCCCCGACTTTATCTGATAACTTATCGTCGCAGC
ATACCCAGCCAGACTTTCCTTCTGCAGCCCTGCCCAACATGAATAACGGT
TCATCAAATAACCATAGCAACATCATAGCCACCGATCTGCCTCATCGGCC
CTCTCATAGTCACCGCTCCAGCATGTCAGGATCGGAACGCCGTCGGTCCC
GTACCGGTTCCAGTTCAATCCTGAACAATGGCCATACCAACGCTAGTGAC
TCGGCCCCCGGGGAACCGACCACAACCCCCCACGACCACCACCGGTCTTC
CTTTGGCCATAACGGGCTTCGCACCTCCAGTCCGCTCAGTAATGTCGGGG
GAAACCCGACCGTTGCCACCGGGGACCCGCATCATCAACGTGCACCGTCC
CTGGGGGAGCTCCATCAGGAACTAGAACAAGAACAAGAAGCACAAGTGAA
CCGTCTTTTACACATGATCCGAAGCCAGCAAGCTCAGCTGCAGCACCTTC
AACAGCAACAGCAACACTCACAGGCCGTGGTGGATGACTCTGGTCCTGCT
GCGGAACGGCTGACCCCATTCCCCCCAATTCCCCCGCTCCCCACAACCAG
CAGTCGGGCGTCAACCCAATTGCCTTCCTCCTTGTCCAGCCGGCGACCCT
CCCGCCCGTCTAGTCAAGCCGCTTCACCCAATCTCCGACCGCTGGCCGAG
CCGTCGTGCGGGTCAGAGGGTCCGGATTGGAGTGCAGGCCCCGGTGAGAG
CCCAGCGCGGCGGGGAAGCAGGGATGAGAGCGCATTTTACCAGGCGGAGG
CAGCGATGCTGACGCGCGAAAATCAAATGCTCCGACAGCGAATCCGCGAT
TTAGAACGCCAAGTTAGTGAGCTGACCTCTGGTGCCCGATCCAGCGAGAT
CCCTGCGGCACCTACCGCACAAGGAACCGAGGCCGTAGATCACCCAGCGT
CCGCAGGAGTGGGATCGGCGAACGAGTCGTCAGACAAGACCTGAATGTCG
CCCGATATCAACTCTCTGTCCCCGACCTGGTCCACTGCCTCTTCCCCGCG
TCAACGTCGGCTGCCCCCGACTTTATCTGATAACTTATCGTCGCAGCATA
CCCAGCCAGACTTTCCTTCTGCAGCCCTGCCCAACATGAATAACGGTTCA
TCAAATAACCATAGCAACATCATAGCCACCGATCTGCCTCATCGGCCCTC
TCATAGTCACCGCTCCAGCATGTCAGGATCGGAACGCCGTCGGTCCCGTA
CCGGTTCCAGTTCAATCCTGAACAATGGCCATACCAACGCTAGTGACTCG
GCCCCCGGGGAACCGACCACAACCCCCCACGACCACCACCGGTCTTCCTT
TGGCCATAACGGGCTTCGCACCTCCAGTCCGCTCAGTAATGTCGGGGGAA
ACCCGACCGTTGCCACCGGGGACCCGCATCATCAACGTGCACCGTCCCTG
GGGGAGCTCCATCAGGAACTAGAACAAGAACAAGAAGCACAAGTGAACCG
TCTTTTACACATGATCCGAAGCCAGCAAGCTCAGCTGCAGCACCTTCAAC
AGCAACAGCAACACTCACAGGCCGTGGTGGATGACTCTGGTCCTGCTGCG
GAACGGCTGACCCCATTCCCCCCAATTCCCCCGCTCCCCACAACCAGCAG
TCGGGCGTCAACCCAATTGCCTTCCTCCTTGTCCAGCCGGCGACCCTCCC
GCCCGTCTAGTCAAGCCGCTTCACCCAATCTCCGACCGCTGGCCGAGCCG
TCGTGCGGGTCAGAGGGTCCGGATTGGAGTGCAGGCCCCGGTGAGAGCCC
AGCGCGGCGGGGAAGCAGGGATGAGAGCGCATTTTACCAGGCGGAGGCAG
CGATGCTGACGCGCGAAAATCAAATGCTCCGACAGCGAATCCGCGATTTA
GAACGCCAAGTTAGTGAGCTGACCTCTGGTGCCCGATCCAGCGAGATCCC
TGCGGCACCTACCGCACAAGGAACCGAGGCCGTAGATCACCCAGCGTCCG
CAGGAGTGGGATCGGCGAACGAGTCGTCAGACAAGACCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006502-T1.utr5p1 | KJC3_006502-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006502-T1.utr3p1 | KJC3_006502-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5891272..5893865 + |
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