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KJC3_006507-T1, KJC3_006507-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006507-T1
Unique NameKJC3_006507-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5911737..5913733-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006507-T1 ID=KJC3_006507-T1|Name=KJC3_006507-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1997bp|location=Sequence derived from alignment at ch4:5911737..5913733- (Aspergillus niger KJC3)
CCCGTCCACTCCGCTAGTGCTGACTGCTCTCGTTATGCAGTTGGCGTTCT
GCAGTTATTCTAGCATCAGATATGTAAGTTATTTCCCGCAGAAGCACAGG
AGCGAGACTAATTGGAGATGTAGATGAGAACCATCAGGAAGGGGTTCGCC
AAGACCTACATCATCTATTCATGATATCGGGCCACGAATAATTGAAGTGT
CGAGTGTCACTTGCCAGGATACAGGGTGCTGCCATACCCCTCTTTCAGTT
ACTATCCTGGAAATCGCATCATCACCATCCTGGATTGCAACATCCTCACC
AGTTGGCGCGCTCACATGCACTGAGCATCCATTTATCAATCCTGGAATAA
GCAACCAAGCAATGAGCCACCCTCTCACCACCACACAATGACCCCCAACT
GGTCCAAACTATGGACCTTCATCGCCAACCCCAAAGACCCCAGTTCTAGC
TCCCCATCACCATATACACTCCGTCGCATAATCAAATCCCTCTCCCTTCT
CACCGTCTTCTCCATCTTCCTCTACGCCCTCTACATTCACTTCCAGCCCT
CCATTATCCCACAAACCCCAGACCTCCCAGACCCAGACCTCCCTCCCTCC
CCAGAAGACTCATACAAATCCATCTACGGCTACCCCCCAACCAACCCCAC
CATCCCTCCCCTGCACATCCACGACCCCAGCATCCTCTACGACCTGCCCA
CAAACACCTACTACGCCTACGGCTCCGGCCCTCACATCCCCATCCACTCC
GCCCCGACCCTCCAAGGACCATGGACCAAAGTCGGCACCGTCCTCGATGC
AGATAGTATTCTACCAAAGGGTGATCGCAAAGCCCCATGGGCACCGACCG
CCCTCGTCCACGACGGTACCTTCTACGTCTTTTACGCGACGAGCCATAGT
GGATGTCGCGATAGCGCTATCGGCGTGGCTACCTCTACTTCTCCGGGCCC
TGGGGGATGGGAGGACCACGGGGCGATAGCTATCTCCGGACGAGGGGAGA
GGGGGAAGGAGTACCCGTTTGATAGGGCGAATGCGATTGATGTTAGTGTT
GTTGTTGATTATACTGACACCCAGACCCAAACCGAACCCTCCGAAGGAGA
GATCTCTCTAGAAGAGGGAAAGAAAGGAAAAGGGAGAGGATACATGACCT
TCGGCAGTTTCTGGACGGGGATATGGCAAGTCCCGCTGAAGCCTAACCTG
CTTCATATGGACAAGCAGGGAGAAGAAGAAAAAAGGGTTAAACATCTCGC
CCATGAGCCCGCAGCCATCCATCCACCAACCAAAAAAGCAGATGGATTAT
GTGGTGATACGACGGGCATGCATCCCATCGAGGGGGCGTTTATATCCTAT
CATGAGCCGTGGTGGTATTTGTGGTTTAGTTGGGGGAAGTGCTGTCATTT
TGATCCGGAGAAATTGCCGAGGGCTGGTCTTGAGTATGTCCTTCTTTTCC
TCCTCGCCCCTTTATCGATAGATATCATCTATTCCTGTTGATTGAGAGGC
AATGAAGTGATAAGCTAATGAAGATTGTATGAAATAGATACAGCATCCGC
GTCGGACGATCAAGTTCTCCTCAAGGTCCATTCGTGGATAAAGAAGGGAA
AGATCTAGTGGATGGAGGAGGGGAGATTGTGTATGGGTCGAATGGGGATG
TTTATGCGCCTGGGGGACAGGGCGTGTTGAGTGGGGAGGTGGAGGGAGAT
GTGCTTTATTATCATTATTGTGAGTTCCTCTCCCCTTTCTTTCAATCGAA
TTGTTTTCGTTGATTTGGGAGAGGCGGTTGGTGCTAATATGGGTGTGGCA
GTGAATATATCTGTGGGGTATGAGTTTAAGGTATGTTTATGTTTTTATCT
TTGGGGTGGTATTGATGTGGGCTAATGGTGGTTTAGGAAGCACGGCTGGG
ATATAATTATTTGAAGTATGTGGATGGGTGGCCGGTTCCACTGTGAGTAT
TGAAGTTGGTAGTATTCTGTTATAGTGGATACTATTGTATAGATCAT
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Coding sequence (CDS) from alignment at ch4:5911737..5913733-

>KJC3_006507-T1 ID=KJC3_006507-T1|Name=KJC3_006507-T1|organism=Aspergillus niger KJC3|type=CDS|length=5268bp|location=Sequence derived from alignment at ch4:5911737..5913733- (Aspergillus niger KJC3)
GAAGCACGGCTGGGATATAATTATTTGAAGTATGTGGATGGGTGGCCGGT
TCCACTGTGATGAATATATCTGTGGGGTATGAGTTTAAGATACAGCATCC
GCGTCGGACGATCAAGTTCTCCTCAAGGTCCATTCGTGGATAAAGAAGGG
AAAGATCTAGTGGATGGAGGAGGGGAGATTGTGTATGGGTCGAATGGGGA
TGTTTATGCGCCTGGGGGACAGGGCGTGTTGAGTGGGGAGGTGGAGGGAG
ATGTGCTTTATTATCATTATTATGACCCCCAACTGGTCCAAACTATGGAC
CTTCATCGCCAACCCCAAAGACCCCAGTTCTAGCTCCCCATCACCATATA
CACTCCGTCGCATAATCAAATCCCTCTCCCTTCTCACCGTCTTCTCCATC
TTCCTCTACGCCCTCTACATTCACTTCCAGCCCTCCATTATCCCACAAAC
CCCAGACCTCCCAGACCCAGACCTCCCTCCCTCCCCAGAAGACTCATACA
AATCCATCTACGGCTACCCCCCAACCAACCCCACCATCCCTCCCCTGCAC
ATCCACGACCCCAGCATCCTCTACGACCTGCCCACAAACACCTACTACGC
CTACGGCTCCGGCCCTCACATCCCCATCCACTCCGCCCCGACCCTCCAAG
GACCATGGACCAAAGTCGGCACCGTCCTCGATGCAGATAGTATTCTACCA
AAGGGTGATCGCAAAGCCCCATGGGCACCGACCGCCCTCGTCCACGACGG
TACCTTCTACGTCTTTTACGCGACGAGCCATAGTGGATGTCGCGATAGCG
CTATCGGCGTGGCTACCTCTACTTCTCCGGGCCCTGGGGGATGGGAGGAC
CACGGGGCGATAGCTATCTCCGGACGAGGGGAGAGGGGGAAGGAGTACCC
GTTTGATAGGGCGAATGCGATTGATGTTAGTGTTGTTGTTGATTATACTG
ACACCCAGACCCAAACCGAACCCTCCGAAGGAGAGATCTCTCTAGAAGAG
GGAAAGAAAGGAAAAGGGAGAGGATACATGACCTTCGGCAGTTTCTGGAC
GGGGATATGGCAAGTCCCGCTGAAGCCTAACCTGCTTCATATGGACAAGC
AGGGAGAAGAAGAAAAAAGGGTTAAACATCTCGCCCATGAGCCCGCAGCC
ATCCATCCACCAACCAAAAAAGCAGATGGATTATGTGGTGATACGACGGG
CATGCATCCCATCGAGGGGGCGTTTATATCCTATCATGAGCCGTGGTGGT
ATTTGTGGTTTAGTTGGGGGAAGTGCTGTCATTTTGATCCGGAGAAATTG
CCGAGGGCTGGTCTTGAGAAGCACGGCTGGGATATAATTATTTGAAGTAT
GTGGATGGGTGGCCGGTTCCACTGTGATGAATATATCTGTGGGGTATGAG
TTTAAGATACAGCATCCGCGTCGGACGATCAAGTTCTCCTCAAGGTCCAT
TCGTGGATAAAGAAGGGAAAGATCTAGTGGATGGAGGAGGGGAGATTGTG
TATGGGTCGAATGGGGATGTTTATGCGCCTGGGGGACAGGGCGTGTTGAG
TGGGGAGGTGGAGGGAGATGTGCTTTATTATCATTATTATGACCCCCAAC
TGGTCCAAACTATGGACCTTCATCGCCAACCCCAAAGACCCCAGTTCTAG
CTCCCCATCACCATATACACTCCGTCGCATAATCAAATCCCTCTCCCTTC
TCACCGTCTTCTCCATCTTCCTCTACGCCCTCTACATTCACTTCCAGCCC
TCCATTATCCCACAAACCCCAGACCTCCCAGACCCAGACCTCCCTCCCTC
CCCAGAAGACTCATACAAATCCATCTACGGCTACCCCCCAACCAACCCCA
CCATCCCTCCCCTGCACATCCACGACCCCAGCATCCTCTACGACCTGCCC
ACAAACACCTACTACGCCTACGGCTCCGGCCCTCACATCCCCATCCACTC
CGCCCCGACCCTCCAAGGACCATGGACCAAAGTCGGCACCGTCCTCGATG
CAGATAGTATTCTACCAAAGGGTGATCGCAAAGCCCCATGGGCACCGACC
GCCCTCGTCCACGACGGTACCTTCTACGTCTTTTACGCGACGAGCCATAG
TGGATGTCGCGATAGCGCTATCGGCGTGGCTACCTCTACTTCTCCGGGCC
CTGGGGGATGGGAGGACCACGGGGCGATAGCTATCTCCGGACGAGGGGAG
AGGGGGAAGGAGTACCCGTTTGATAGGGCGAATGCGATTGATGTTAGTGT
TGTTGTTGATTATACTGACACCCAGACCCAAACCGAACCCTCCGAAGGAG
AGATCTCTCTAGAAGAGGGAAAGAAAGGAAAAGGGAGAGGATACATGACC
TTCGGCAGTTTCTGGACGGGGATATGGCAAGTCCCGCTGAAGCCTAACCT
GCTTCATATGGACAAGCAGGGAGAAGAAGAAAAAAGGGTTAAACATCTCG
CCCATGAGCCCGCAGCCATCCATCCACCAACCAAAAAAGCAGATGGATTA
TGTGGTGATACGACGGGCATGCATCCCATCGAGGGGGCGTTTATATCCTA
TCATGAGCCGTGGTGGTATTTGTGGTTTAGTTGGGGGAAGTGCTGTCATT
TTGATCCGGAGAAATTGCCGAGGGCTGGTCTTGAGAAGCACGGCTGGGAT
ATAATTATTTGAAGTATGTGGATGGGTGGCCGGTTCCACTGTGATGAATA
TATCTGTGGGGTATGAGTTTAAGATACAGCATCCGCGTCGGACGATCAAG
TTCTCCTCAAGGTCCATTCGTGGATAAAGAAGGGAAAGATCTAGTGGATG
GAGGAGGGGAGATTGTGTATGGGTCGAATGGGGATGTTTATGCGCCTGGG
GGACAGGGCGTGTTGAGTGGGGAGGTGGAGGGAGATGTGCTTTATTATCA
TTATTATGACCCCCAACTGGTCCAAACTATGGACCTTCATCGCCAACCCC
AAAGACCCCAGTTCTAGCTCCCCATCACCATATACACTCCGTCGCATAAT
CAAATCCCTCTCCCTTCTCACCGTCTTCTCCATCTTCCTCTACGCCCTCT
ACATTCACTTCCAGCCCTCCATTATCCCACAAACCCCAGACCTCCCAGAC
CCAGACCTCCCTCCCTCCCCAGAAGACTCATACAAATCCATCTACGGCTA
CCCCCCAACCAACCCCACCATCCCTCCCCTGCACATCCACGACCCCAGCA
TCCTCTACGACCTGCCCACAAACACCTACTACGCCTACGGCTCCGGCCCT
CACATCCCCATCCACTCCGCCCCGACCCTCCAAGGACCATGGACCAAAGT
CGGCACCGTCCTCGATGCAGATAGTATTCTACCAAAGGGTGATCGCAAAG
CCCCATGGGCACCGACCGCCCTCGTCCACGACGGTACCTTCTACGTCTTT
TACGCGACGAGCCATAGTGGATGTCGCGATAGCGCTATCGGCGTGGCTAC
CTCTACTTCTCCGGGCCCTGGGGGATGGGAGGACCACGGGGCGATAGCTA
TCTCCGGACGAGGGGAGAGGGGGAAGGAGTACCCGTTTGATAGGGCGAAT
GCGATTGATGTTAGTGTTGTTGTTGATTATACTGACACCCAGACCCAAAC
CGAACCCTCCGAAGGAGAGATCTCTCTAGAAGAGGGAAAGAAAGGAAAAG
GGAGAGGATACATGACCTTCGGCAGTTTCTGGACGGGGATATGGCAAGTC
CCGCTGAAGCCTAACCTGCTTCATATGGACAAGCAGGGAGAAGAAGAAAA
AAGGGTTAAACATCTCGCCCATGAGCCCGCAGCCATCCATCCACCAACCA
AAAAAGCAGATGGATTATGTGGTGATACGACGGGCATGCATCCCATCGAG
GGGGCGTTTATATCCTATCATGAGCCGTGGTGGTATTTGTGGTTTAGTTG
GGGGAAGTGCTGTCATTTTGATCCGGAGAAATTGCCGAGGGCTGGTCTTG
AGAAGCACGGCTGGGATATAATTATTTGAAGTATGTGGATGGGTGGCCGG
TTCCACTGTGATGAATATATCTGTGGGGTATGAGTTTAAGATACAGCATC
CGCGTCGGACGATCAAGTTCTCCTCAAGGTCCATTCGTGGATAAAGAAGG
GAAAGATCTAGTGGATGGAGGAGGGGAGATTGTGTATGGGTCGAATGGGG
ATGTTTATGCGCCTGGGGGACAGGGCGTGTTGAGTGGGGAGGTGGAGGGA
GATGTGCTTTATTATCATTATTATGACCCCCAACTGGTCCAAACTATGGA
CCTTCATCGCCAACCCCAAAGACCCCAGTTCTAGCTCCCCATCACCATAT
ACACTCCGTCGCATAATCAAATCCCTCTCCCTTCTCACCGTCTTCTCCAT
CTTCCTCTACGCCCTCTACATTCACTTCCAGCCCTCCATTATCCCACAAA
CCCCAGACCTCCCAGACCCAGACCTCCCTCCCTCCCCAGAAGACTCATAC
AAATCCATCTACGGCTACCCCCCAACCAACCCCACCATCCCTCCCCTGCA
CATCCACGACCCCAGCATCCTCTACGACCTGCCCACAAACACCTACTACG
CCTACGGCTCCGGCCCTCACATCCCCATCCACTCCGCCCCGACCCTCCAA
GGACCATGGACCAAAGTCGGCACCGTCCTCGATGCAGATAGTATTCTACC
AAAGGGTGATCGCAAAGCCCCATGGGCACCGACCGCCCTCGTCCACGACG
GTACCTTCTACGTCTTTTACGCGACGAGCCATAGTGGATGTCGCGATAGC
GCTATCGGCGTGGCTACCTCTACTTCTCCGGGCCCTGGGGGATGGGAGGA
CCACGGGGCGATAGCTATCTCCGGACGAGGGGAGAGGGGGAAGGAGTACC
CGTTTGATAGGGCGAATGCGATTGATGTTAGTGTTGTTGTTGATTATACT
GACACCCAGACCCAAACCGAACCCTCCGAAGGAGAGATCTCTCTAGAAGA
GGGAAAGAAAGGAAAAGGGAGAGGATACATGACCTTCGGCAGTTTCTGGA
CGGGGATATGGCAAGTCCCGCTGAAGCCTAACCTGCTTCATATGGACAAG
CAGGGAGAAGAAGAAAAAAGGGTTAAACATCTCGCCCATGAGCCCGCAGC
CATCCATCCACCAACCAAAAAAGCAGATGGATTATGTGGTGATACGACGG
GCATGCATCCCATCGAGGGGGCGTTTATATCCTATCATGAGCCGTGGTGG
TATTTGTGGTTTAGTTGGGGGAAGTGCTGTCATTTTGATCCGGAGAAATT
GCCGAGGGCTGGTCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006507KJC3_006507Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006507-T1KJC3_006507-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006507-T1.cdsKJC3_006507-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006507-T1.utr3p1KJC3_006507-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006507-T1.exon5KJC3_006507-T1.exon5Aspergillus niger KJC3exon
KJC3_006507-T1.exon4KJC3_006507-T1.exon4Aspergillus niger KJC3exon
KJC3_006507-T1.exon3KJC3_006507-T1.exon3Aspergillus niger KJC3exon
KJC3_006507-T1.exon2KJC3_006507-T1.exon2Aspergillus niger KJC3exon
KJC3_006507-T1.exon1KJC3_006507-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006507-T1.utr5p2KJC3_006507-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006507-T1.utr5p1KJC3_006507-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteCAZy:GH43_30
NoteCAZy:GH43_4
NoteCAZy:GH43_3
NoteCAZy:GH43
NoteCAZy:GH43_5
NoteCAZy:GH43_6
DBxrefInterPro:IPR006710
DBxrefInterPro:IPR023296
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5911737..5913733 -
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