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KJC3_006518-T2, KJC3_006518-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006518-T2
Unique NameKJC3_006518-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5943118..5945444+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006518-T2 ID=KJC3_006518-T2|Name=KJC3_006518-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2327bp|location=Sequence derived from alignment at ch4:5943118..5945444+ (Aspergillus niger KJC3)
TTCATCTCAATTTCCTTTCCCCTCTCCCCTTATCGGGGTTTTGTGGCTAG
GCTGAGAGGTTCACCGCTTAATGCTCGTATTTGATCGCGTTCTTGCGCCC
ATATGTAATCCCGCCGTATATTCCCTCCCTCTCACTTCTCTCCCTCGACT
GGCAATGGTCATCTGGAACCATGCCTCTTGAGTCCAATGAACCCCTCGAC
CGCGAGGATGCCCCGTTCCTTGCCTCGGGTCAAAGGCCCTCGTCCCCTGT
GGATGAAGGGGAGCCCAGTCCGTCGGATGCACAGAAAGAACACCTTCGGA
AAACTCGCTTTCGCTTAATGTTGACCCTCTTTGCCATGATTCTGGCCGTC
GAAGTTGGCATCTGCATGTCCAACGGCCCCGTCACCCGTATATACGAGTC
CATCGCCTGTCGAGAGTACTACGCGCAACATGATCCCACCCAGATTGGGG
CTGACGGCGAGGTCCAGGAGGAATTGTGCAAGGTTAAGGCGGTCCAGCAG
GATCTGGCTGCAGTGAAGGGCTATATGGAGTTTTTCGATGGCATTCTCAG
TAGGTCACGACGAAGGCACCACTGTTTCGGACGAGGCTACGTCGCATCTC
TTGTTCCCTAGTCTCTACCGATCGGGCGCCTCCCTTTTTGCACTTCATGC
GCGACATATAGACGAGGACCCTTATTCACGTTCCTTCTCATCCAGGTGCT
GTGCTAGCAATTCCATACGGTCTGTTGGCTGATCGACGGGGACGGAAATC
CACCATTTGTCTCAGCATTCCCGGATTCGCCCTGAACTGCATCATTCAGC
TGGTGGTGATGTGGCGCCCAGACGTCTTCCCCCTGCGAACTGTCTGGGCA
TCCTCCTTGGCTTGGTTGTTTGGCGGAGGCCCTGTCGTGGCTTTCGCCAT
TATCTGGACCATGATGTCGGATGTGTCAACCGAAGAGGAAAGGTATGCGT
GTTCTAGATGCCACAATCGTTGGTGGGATTATAGCTAATGATTCTCAGAG
CGGCGATATTCTTCAGGTTCGGCGTGGCTAGCATGGGGGCCGATTTCGCC
TCCAGTGCCGCCAGCTCCTGGTTGATGTCACTAGACCCGTGGCTTCCTCT
CTTACTAGGTTGGGGCTTGGCTGTTATTGGCATGTTCTTCGCCTTATCGC
TACCGGAAACAATGCGTGTAGGATCATCGCAGCCGACTTGGAAGCAACCG
AGCATGGAGATGAGTCAGGTATCACCGGGAAACGCCGAGTATAAGGAAGT
TCCCAGCAAGGAACAAGAACAGGAGGTGCTTAGCGATGAAGAGACTCTTC
AAGGAGAGGAAGCTTCTTTCACGACCAAGACAGCACGACCAACCTTCTTC
GCTTCTGCGAATCAACGGTCGCGGGCCTATTTCGCGCCCTACTCCTTCAT
TTTCAGGAACAAACAGATCATGCTCCTCCTTACCGCGTTTCTTGTCTATC
GACTGAGCCGTGGCTCGTCCTGGTTTTTGGTCCAGTACATCTCCACGCGG
TATAAGTGGACCCTGGCAGAAGCGAACTTCCTCATGTCATTCAAGCCGGC
CTTGACCATCCCGTTGTTCTTGTTCATCCTACCGGCTATTTCACGACAGC
TGCTCAAAACCATGAAGCCGACGCAGAAAGACCTGCAGCTCATGCGCATC
AGTATCGGGCTGTTGGCGGTAGGAACGTTGGGAATCGGTCTTTCTCCTAG
CGTAGCCATGTTGATTCCCAGTCTGCTCGTCCAGACATCCGGGTCTGGAT
TTGTCTTCCTGACTCGTGCGCTCATTACCACCTTGGTGAATCGAGAAGAA
ACGGCACGTCTCTTCACCATCATCGAGGTTCTGCAGTCGGTGGGCAATGT
CATTGCCAGTTTGTCCATTACCACGGTGTTCCAAATCGGGCTGGAACTCG
GAGGGCCTTGGATTGGTCTGGCCTGGATGATGACGGCGACGGCCTTCACT
CTGGTAGGTGTAGCTATCTGGATGTTTCGGATTCCTTCTCGTCAGTCGGA
TGACAAGATGGAGGAAGACAACGAGGTGTTTTGAACTAGTGGGACCTGAA
CAATGTACATATATAGAACTTTAAGATTTTTCACTTCATGTAAATAGTAT
AGATGAGAAAGAGAAAGGAACTTGCTTGAAGTCTGTTGATGTGAGGGATG
AACTACTTACTTACTATAACTATGGGCGGTGACCTTCCAGCCTCGGTTTC
CCGATCGGGGAAGGTGATTACCCAAGCAGGACTAGTGCGGGAGAGCAGCA
GCAGCTCGCATGTGAACATCTCAATTCCATTCCTTCGTGCTGAAATCAAC
AAATCACTGGGACTTTCTGCTGGTGCC
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Coding sequence (CDS) from alignment at ch4:5943118..5945444+

>KJC3_006518-T2 ID=KJC3_006518-T2|Name=KJC3_006518-T2|organism=Aspergillus niger KJC3|type=CDS|length=2340bp|location=Sequence derived from alignment at ch4:5943118..5945444+ (Aspergillus niger KJC3)
ATGTGGCGCCCAGACGTCTTCCCCCTGCGAACTGTCTGGGCATCCTCCTT
GGCTTGGTTGTTTGGCGGAGGCCCTGTCGTGGCTTTCGCCATTATCTGGA
CCATGATGTCGGATGTGTCAACCGAAGAGGAAAGAGCGGCGATATTCTTC
AGGTTCGGCGTGGCTAGCATGGGGGCCGATTTCGCCTCCAGTGCCGCCAG
CTCCTGGTTGATGTCACTAGACCCGTGGCTTCCTCTCTTACTAGGTTGGG
GCTTGGCTGTTATTGGCATGTTCTTCGCCTTATCGCTACCGGAAACAATG
CGTGTAGGATCATCGCAGCCGACTTGGAAGCAACCGAGCATGGAGATGAG
TCAGGTATCACCGGGAAACGCCGAGTATAAGGAAGTTCCCAGCAAGGAAC
AAGAACAGGAGGTGCTTAGCGATGAAGAGACTCTTCAAGGAGAGGAAGCT
TCTTTCACGACCAAGACAGCACGACCAACCTTCTTCGCTTCTGCGAATCA
ACGGTCGCGGGCCTATTTCGCGCCCTACTCCTTCATTTTCAGGAACAAAC
AGATCATGCTCCTCCTTACCGCGTTTCTTGTCTATCGACTGAGCCGTGGC
TCGTCCTGGTTTTTGGTCCAGTACATCTCCACGCGGTATAAGTGGACCCT
GGCAGAAGCGAACTTCCTCATGTCATTCAAGCCGGCCTTGACCATCCCGT
TGTTCTTGTTCATCCTACCGGCTATTTCACGACAGCTGCTCAAAACCATG
AAGCCGACGCAGAAAGACCTGCAGCTCATGCGCATCAGTATCGGGCTGTT
GGCGGTAGGAACGTTGGGAATCGGTCTTTCTCCTAGCGTAGCCATGTTGA
TTCCCAGTCTGCTCGTCCAGACATCCGGGTCTGGATTTGTCTTCCTGACT
CGTGCGCTCATTACCACCTTGGTGAATCGAGAAGAAACGGCACGTCTCTT
CACCATCATCGAGGTTCTGCAGTCGGTGGGCAATGTCATTGCCAGTTTGT
CCATTACCACGGTGTTCCAAATCGGGCTGGAACTCGGAGGGCCTTGGATT
GGTCTGGCCTGGATGATGACGGCGACGGCCTTCACTCTGGTAGGTGTAGC
TATCTGGATGTTTCGGATTCCTTCTCGTCAGTCGGATGACAAGATGGAGG
AAGACAACGAGGTGTTTTGAATGTGGCGCCCAGACGTCTTCCCCCTGCGA
ACTGTCTGGGCATCCTCCTTGGCTTGGTTGTTTGGCGGAGGCCCTGTCGT
GGCTTTCGCCATTATCTGGACCATGATGTCGGATGTGTCAACCGAAGAGG
AAAGAGCGGCGATATTCTTCAGGTTCGGCGTGGCTAGCATGGGGGCCGAT
TTCGCCTCCAGTGCCGCCAGCTCCTGGTTGATGTCACTAGACCCGTGGCT
TCCTCTCTTACTAGGTTGGGGCTTGGCTGTTATTGGCATGTTCTTCGCCT
TATCGCTACCGGAAACAATGCGTGTAGGATCATCGCAGCCGACTTGGAAG
CAACCGAGCATGGAGATGAGTCAGGTATCACCGGGAAACGCCGAGTATAA
GGAAGTTCCCAGCAAGGAACAAGAACAGGAGGTGCTTAGCGATGAAGAGA
CTCTTCAAGGAGAGGAAGCTTCTTTCACGACCAAGACAGCACGACCAACC
TTCTTCGCTTCTGCGAATCAACGGTCGCGGGCCTATTTCGCGCCCTACTC
CTTCATTTTCAGGAACAAACAGATCATGCTCCTCCTTACCGCGTTTCTTG
TCTATCGACTGAGCCGTGGCTCGTCCTGGTTTTTGGTCCAGTACATCTCC
ACGCGGTATAAGTGGACCCTGGCAGAAGCGAACTTCCTCATGTCATTCAA
GCCGGCCTTGACCATCCCGTTGTTCTTGTTCATCCTACCGGCTATTTCAC
GACAGCTGCTCAAAACCATGAAGCCGACGCAGAAAGACCTGCAGCTCATG
CGCATCAGTATCGGGCTGTTGGCGGTAGGAACGTTGGGAATCGGTCTTTC
TCCTAGCGTAGCCATGTTGATTCCCAGTCTGCTCGTCCAGACATCCGGGT
CTGGATTTGTCTTCCTGACTCGTGCGCTCATTACCACCTTGGTGAATCGA
GAAGAAACGGCACGTCTCTTCACCATCATCGAGGTTCTGCAGTCGGTGGG
CAATGTCATTGCCAGTTTGTCCATTACCACGGTGTTCCAAATCGGGCTGG
AACTCGGAGGGCCTTGGATTGGTCTGGCCTGGATGATGACGGCGACGGCC
TTCACTCTGGTAGGTGTAGCTATCTGGATGTTTCGGATTCCTTCTCGTCA
GTCGGATGACAAGATGGAGGAAGACAACGAGGTGTTTTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006518KJC3_006518Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006518-T2.utr5p1KJC3_006518-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006518-T2.exon1KJC3_006518-T2.exon1Aspergillus niger KJC3exon
KJC3_006518-T2.exon2KJC3_006518-T2.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006518-T2.cdsKJC3_006518-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006518-T2.utr3p1KJC3_006518-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006518-T2KJC3_006518-T2-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5943118..5945444 +
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