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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5951890..5953600+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006521-T1 ID=KJC3_006521-T1|Name=KJC3_006521-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1711bp|location=Sequence derived from alignment at ch4:5951890..5953600+ (Aspergillus niger KJC3)
CGTAAGAGTTGATACATCTCCCGAACCAGACCCGGGTGCATTAGCGGTGC
GCCTCAGCTGAACCACATATCCCCGATGGCAGGTCCCCGGGGACATGTTG
CCCACGAAGATCCGTCTGAATAGGGTCGCAGATTGGTACTACGCGTCCAT
CGTATGCATGTTGATGTCGCAATTTCCTTCCTAGCGGCATCCAGCCTGCT
ATTGGCAGTCTTGAAGCCAATGGTGTGCCGCTACATGTCACTGGAAAGCT
TCTATCTCATGCAACCCTCAGCCGCGCGAGTGTCACCTTCCATTTCGCAA
CCCCTCCAGCTGCAGTCTGACGGCGAACTTCGGACCAAGCACCGATCGTG
TAGTTAGCACTTTCTGGGAAAGGGGGGGGAAAGTGCAACCCAAATAACAA
TAGTCTCTGCGCGCCTCCCTGAATAACCCCATATCCCCTAATTGTAAGCT
CAGCATGGCTTCCTATCACCGAGTTCTTGGAGTTTTCGGCAAGTCCGTCA
AGGACAAAACGCTGGAGTGCGATTGGTATGTCTACGCCGCTGCGCGAAAT
CAGGGTAACTTTGCTAACCATTCTACAAGTGATATTCATCCATGGGAAAT
CAAAATCAACGGTGAACAATGGCCAGGAAAGATCCGCCTAATCGGGTTTG
TGGATGTGTTCTTCCTTTTCTCTTACTCGGCCAACGCACGTTTCGAGAAG
GGAATCATTGTCTACAGTATGCCCTGGTAAACCTTGCTATAGAAAACGAT
TAGCATTTGTTGACTTGCTCATAGAGGAAAGGTATGACCTCGAAAAGCTC
CTCCAGCAAAGCGATGAAGCTCGTGCGGAAGCTGGCGAGAAGACTTCCAA
GGAAGATCTCGAGAATTCTAGCGAAGAATATTCCGATACTTCTGCTACCC
CAGAAACTCTCTTGTCAAGGCTTCCGTGCCATGAAAGCAAGGAGGGAGTG
ATTCAGACTGAGGTGGTCGAACTCGGTCGCGAGACGCCGAGCTCGTCTTC
TCAGTCGGAGATCCAACAAGGCATGTTGCATACAGTGTTCCACATCCGCA
AAAGGACAAGTCAGGACTAACTGAGTTCAGCCACAGACCAACCCACAAAG
GATGACAAACGTCTGGACCGTCTAAAGTTTGGAAACACAACATTGTACAA
AGTACGAAGCTTGGGCCACGAGGTGGGTCTCAAAAACCGATATCCAGTTT
CCTCTATTCAGGAATGGACCATCGAGATTAACAAACCCTACCATCGGGCG
CTGAGACGTATGTGAGCCTGGATTCTTTGGTTTCCGCATATGTCCGCCTG
CTCTGTCTTTTGATGCTGACTATGTTTGCGACGTATGTGAACAGGACGCA
TTAAGCGTGCCATCAAGGAACACACAACCACCGAGCTCTTGGAAGATGTG
GTCCGATGTGGGTTTATCTCACATGGTCAGATGGCCGGCCACGTTCTATC
CAAGTACCTCGTGGGTGGTGTTTTGGATGACACTCTGACGAAGTATGTCG
AGGGATTGGCGGTGGGAAATGGAGCTGGAAGGGTGCCACTGGCTAACCAG
GGGTACTGAATGTAGTATATATTTGTGATGGGTATCCTGATCTTGGTTGA
ATGTTAGATGGGGTTGTGATTGTTGGTCATGATGATCTGATGGGTTGTGG
TAGTAGCTCATAGTCGTTGTGGTAGTTATAGACGATTCTGGAATAGGAAA
TCCATGTGGAG back to topCoding sequence (CDS) from alignment at ch4:5951890..5953600+ >KJC3_006521-T1 ID=KJC3_006521-T1|Name=KJC3_006521-T1|organism=Aspergillus niger KJC3|type=CDS|length=2556bp|location=Sequence derived from alignment at ch4:5951890..5953600+ (Aspergillus niger KJC3)
ATGGCTTCCTATCACCGAGTTCTTGGAGTTTTCGGCAAGTCCGTCAAGGA
CAAAACGCTGGAGTGCGATTGTGATATTCATCCATGGGAAATCAAAATCA
ACGGTGAACAATGGCCAGGAAAGATCCGCCTAATCGGGTTTGTGGATGTG
TTCTTCCTTTTCTCTTACTCGGCCAACGCACGTTTCGAGAAGGGAATCAT
TGTCTACAAGGAAAGGTATGACCTCGAAAAGCTCCTCCAGCAAAGCGATG
AAGCTCGTGCGGAAGCTGGCGAGAAGACTTCCAAGGAAGATCTCGAGAAT
TCTAGCGAAGAATATTCCGATACTTCTGCTACCCCAGAAACTCTCTTGTC
AAGGCTTCCGTGCCATGAAAGCAAGGAGGGAGTGATTCAGACTGAGGTGG
TCGAACTCGGTCGCGAGACGCCGAGCTCGTCTTCTCAGTCGGAGATCCAA
CAAGCCACAGACCAACCCACAAAGGATGACAAACGTCTGGACCGTCTAAA
GTTTGGAAACACAACATTGTACAAAGTACGAAGCTTGGGCCACGAGGTGG
GTCTCAAAAACCGATATCCAGTTTCCTCTATTCAGGAATGGACCATCGAG
ATTAACAAACCCTACCATCGGGCGCTGAGACGTATGTGAATGGCTTCCTA
TCACCGAGTTCTTGGAGTTTTCGGCAAGTCCGTCAAGGACAAAACGCTGG
AGTGCGATTGTGATATTCATCCATGGGAAATCAAAATCAACGGTGAACAA
TGGCCAGGAAAGATCCGCCTAATCGGGTTTGTGGATGTGTTCTTCCTTTT
CTCTTACTCGGCCAACGCACGTTTCGAGAAGGGAATCATTGTCTACAAGG
AAAGGTATGACCTCGAAAAGCTCCTCCAGCAAAGCGATGAAGCTCGTGCG
GAAGCTGGCGAGAAGACTTCCAAGGAAGATCTCGAGAATTCTAGCGAAGA
ATATTCCGATACTTCTGCTACCCCAGAAACTCTCTTGTCAAGGCTTCCGT
GCCATGAAAGCAAGGAGGGAGTGATTCAGACTGAGGTGGTCGAACTCGGT
CGCGAGACGCCGAGCTCGTCTTCTCAGTCGGAGATCCAACAAGCCACAGA
CCAACCCACAAAGGATGACAAACGTCTGGACCGTCTAAAGTTTGGAAACA
CAACATTGTACAAAGTACGAAGCTTGGGCCACGAGGTGGGTCTCAAAAAC
CGATATCCAGTTTCCTCTATTCAGGAATGGACCATCGAGATTAACAAACC
CTACCATCGGGCGCTGAGACGTATGTGAATGGCTTCCTATCACCGAGTTC
TTGGAGTTTTCGGCAAGTCCGTCAAGGACAAAACGCTGGAGTGCGATTGT
GATATTCATCCATGGGAAATCAAAATCAACGGTGAACAATGGCCAGGAAA
GATCCGCCTAATCGGGTTTGTGGATGTGTTCTTCCTTTTCTCTTACTCGG
CCAACGCACGTTTCGAGAAGGGAATCATTGTCTACAAGGAAAGGTATGAC
CTCGAAAAGCTCCTCCAGCAAAGCGATGAAGCTCGTGCGGAAGCTGGCGA
GAAGACTTCCAAGGAAGATCTCGAGAATTCTAGCGAAGAATATTCCGATA
CTTCTGCTACCCCAGAAACTCTCTTGTCAAGGCTTCCGTGCCATGAAAGC
AAGGAGGGAGTGATTCAGACTGAGGTGGTCGAACTCGGTCGCGAGACGCC
GAGCTCGTCTTCTCAGTCGGAGATCCAACAAGCCACAGACCAACCCACAA
AGGATGACAAACGTCTGGACCGTCTAAAGTTTGGAAACACAACATTGTAC
AAAGTACGAAGCTTGGGCCACGAGGTGGGTCTCAAAAACCGATATCCAGT
TTCCTCTATTCAGGAATGGACCATCGAGATTAACAAACCCTACCATCGGG
CGCTGAGACGTATGTGAATGGCTTCCTATCACCGAGTTCTTGGAGTTTTC
GGCAAGTCCGTCAAGGACAAAACGCTGGAGTGCGATTGTGATATTCATCC
ATGGGAAATCAAAATCAACGGTGAACAATGGCCAGGAAAGATCCGCCTAA
TCGGGTTTGTGGATGTGTTCTTCCTTTTCTCTTACTCGGCCAACGCACGT
TTCGAGAAGGGAATCATTGTCTACAAGGAAAGGTATGACCTCGAAAAGCT
CCTCCAGCAAAGCGATGAAGCTCGTGCGGAAGCTGGCGAGAAGACTTCCA
AGGAAGATCTCGAGAATTCTAGCGAAGAATATTCCGATACTTCTGCTACC
CCAGAAACTCTCTTGTCAAGGCTTCCGTGCCATGAAAGCAAGGAGGGAGT
GATTCAGACTGAGGTGGTCGAACTCGGTCGCGAGACGCCGAGCTCGTCTT
CTCAGTCGGAGATCCAACAAGCCACAGACCAACCCACAAAGGATGACAAA
CGTCTGGACCGTCTAAAGTTTGGAAACACAACATTGTACAAAGTACGAAG
CTTGGGCCACGAGGTGGGTCTCAAAAACCGATATCCAGTTTCCTCTATTC
AGGAATGGACCATCGAGATTAACAAACCCTACCATCGGGCGCTGAGACGT
ATGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006521-T1.utr5p1 | KJC3_006521-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006521-T1.utr3p1 | KJC3_006521-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5951890..5953600 + |
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