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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5951890..5953600+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006521-T2 ID=KJC3_006521-T2|Name=KJC3_006521-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1711bp|location=Sequence derived from alignment at ch4:5951890..5953600+ (Aspergillus niger KJC3)
CGTAAGAGTTGATACATCTCCCGAACCAGACCCGGGTGCATTAGCGGTGC
GCCTCAGCTGAACCACATATCCCCGATGGCAGGTCCCCGGGGACATGTTG
CCCACGAAGATCCGTCTGAATAGGGTCGCAGATTGGTACTACGCGTCCAT
CGTATGCATGTTGATGTCGCAATTTCCTTCCTAGCGGCATCCAGCCTGCT
ATTGGCAGTCTTGAAGCCAATGGTGTGCCGCTACATGTCACTGGAAAGCT
TCTATCTCATGCAACCCTCAGCCGCGCGAGTGTCACCTTCCATTTCGCAA
CCCCTCCAGCTGCAGTCTGACGGCGAACTTCGGACCAAGCACCGATCGTG
TAGTTAGCACTTTCTGGGAAAGGGGGGGGAAAGTGCAACCCAAATAACAA
TAGTCTCTGCGCGCCTCCCTGAATAACCCCATATCCCCTAATTGTAAGCT
CAGCATGGCTTCCTATCACCGAGTTCTTGGAGTTTTCGGCAAGTCCGTCA
AGGACAAAACGCTGGAGTGCGATTGGTATGTCTACGCCGCTGCGCGAAAT
CAGGGTAACTTTGCTAACCATTCTACAAGTGATATTCATCCATGGGAAAT
CAAAATCAACGGTGAACAATGGCCAGGAAAGATCCGCCTAATCGGGTTTG
TGGATGTGTTCTTCCTTTTCTCTTACTCGGCCAACGCACGTTTCGAGAAG
GGAATCATTGTCTACAGTATGCCCTGGTAAACCTTGCTATAGAAAACGAT
TAGCATTTGTTGACTTGCTCATAGAGGAAAGGTATGACCTCGAAAAGCTC
CTCCAGCAAAGCGATGAAGCTCGTGCGGAAGCTGGCGAGAAGACTTCCAA
GGAAGATCTCGAGAATTCTAGCGAAGAATATTCCGATACTTCTGCTACCC
CAGAAACTCTCTTGTCAAGGCTTCCGTGCCATGAAAGCAAGGAGGGAGTG
ATTCAGACTGAGGTGGTCGAACTCGGTCGCGAGACGCCGAGCTCGTCTTC
TCAGTCGGAGATCCAACAAGGCATGTTGCATACAGTGTTCCACATCCGCA
AAAGGACAAGTCAGGACTAACTGAGTTCAGCCACAGACCAACCCACAAAG
GATGACAAACGTCTGGACCGTCTAAAGTTTGGAAACACAACATTGTACAA
AGTACGAAGCTTGGGCCACGAGGTGGGTCTCAAAAACCGATATCCAGTTT
CCTCTATTCAGGAATGGACCATCGAGATTAACAAACCCTACCATCGGGCG
CTGAGACGTATGTGAGCCTGGATTCTTTGGTTTCCGCATATGTCCGCCTG
CTCTGTCTTTTGATGCTGACTATGTTTGCGACGTATGTGAACAGGACGCA
TTAAGCGTGCCATCAAGGAACACACAACCACCGAGCTCTTGGAAGATGTG
GTCCGATGTGGGTTTATCTCACATGGTCAGATGGCCGGCCACGTTCTATC
CAAGTACCTCGTGGGTGGTGTTTTGGATGACACTCTGACGAAGTATGTCG
AGGGATTGGCGGTGGGAAATGGAGCTGGAAGGGTGCCACTGGCTAACCAG
GGGTACTGAATGTAGTATATATTTGTGATGGGTATCCTGATCTTGGTTGA
ATGTTAGATGGGGTTGTGATTGTTGGTCATGATGATCTGATGGGTTGTGG
TAGTAGCTCATAGTCGTTGTGGTAGTTATAGACGATTCTGGAATAGGAAA
TCCATGTGGAG back to topCoding sequence (CDS) from alignment at ch4:5951890..5953600+ >KJC3_006521-T2 ID=KJC3_006521-T2|Name=KJC3_006521-T2|organism=Aspergillus niger KJC3|type=CDS|length=4230bp|location=Sequence derived from alignment at ch4:5951890..5953600+ (Aspergillus niger KJC3)
ATGGCTTCCTATCACCGAGTTCTTGGAGTTTTCGGCAAGTCCGTCAAGGA
CAAAACGCTGGAGTGCGATTGTGATATTCATCCATGGGAAATCAAAATCA
ACGGTGAACAATGGCCAGGAAAGATCCGCCTAATCGGGTTTGTGGATGTG
TTCTTCCTTTTCTCTTACTCGGCCAACGCACGTTTCGAGAAGGGAATCAT
TGTCTACAAGGAAAGGTATGACCTCGAAAAGCTCCTCCAGCAAAGCGATG
AAGCTCGTGCGGAAGCTGGCGAGAAGACTTCCAAGGAAGATCTCGAGAAT
TCTAGCGAAGAATATTCCGATACTTCTGCTACCCCAGAAACTCTCTTGTC
AAGGCTTCCGTGCCATGAAAGCAAGGAGGGAGTGATTCAGACTGAGGTGG
TCGAACTCGGTCGCGAGACGCCGAGCTCGTCTTCTCAGTCGGAGATCCAA
CAAGCCACAGACCAACCCACAAAGGATGACAAACGTCTGGACCGTCTAAA
GTTTGGAAACACAACATTGTACAAAGTACGAAGCTTGGGCCACGAGGTGG
GTCTCAAAAACCGATATCCAGTTTCCTCTATTCAGGAATGGACCATCGAG
ATTAACAAACCCTACCATCGGGCGCTGAGACGACGCATTAAGCGTGCCAT
CAAGGAACACACAACCACCGAGCTCTTGGAAGATGTGGTCCGATGTGGGT
TTATCTCACATGGTCAGATGGCCGGCCACGTTCTATCCAAGTACCTCGTG
GGTGGTGTTTTGGATGACACTCTGACGAAGTATGTCGAGGGATTGGCGGT
GGGAAATGGAGCTGGAAGGGTGCCACTGGCTAACCAGGGGTACTGAATGG
CTTCCTATCACCGAGTTCTTGGAGTTTTCGGCAAGTCCGTCAAGGACAAA
ACGCTGGAGTGCGATTGTGATATTCATCCATGGGAAATCAAAATCAACGG
TGAACAATGGCCAGGAAAGATCCGCCTAATCGGGTTTGTGGATGTGTTCT
TCCTTTTCTCTTACTCGGCCAACGCACGTTTCGAGAAGGGAATCATTGTC
TACAAGGAAAGGTATGACCTCGAAAAGCTCCTCCAGCAAAGCGATGAAGC
TCGTGCGGAAGCTGGCGAGAAGACTTCCAAGGAAGATCTCGAGAATTCTA
GCGAAGAATATTCCGATACTTCTGCTACCCCAGAAACTCTCTTGTCAAGG
CTTCCGTGCCATGAAAGCAAGGAGGGAGTGATTCAGACTGAGGTGGTCGA
ACTCGGTCGCGAGACGCCGAGCTCGTCTTCTCAGTCGGAGATCCAACAAG
CCACAGACCAACCCACAAAGGATGACAAACGTCTGGACCGTCTAAAGTTT
GGAAACACAACATTGTACAAAGTACGAAGCTTGGGCCACGAGGTGGGTCT
CAAAAACCGATATCCAGTTTCCTCTATTCAGGAATGGACCATCGAGATTA
ACAAACCCTACCATCGGGCGCTGAGACGACGCATTAAGCGTGCCATCAAG
GAACACACAACCACCGAGCTCTTGGAAGATGTGGTCCGATGTGGGTTTAT
CTCACATGGTCAGATGGCCGGCCACGTTCTATCCAAGTACCTCGTGGGTG
GTGTTTTGGATGACACTCTGACGAAGTATGTCGAGGGATTGGCGGTGGGA
AATGGAGCTGGAAGGGTGCCACTGGCTAACCAGGGGTACTGAATGGCTTC
CTATCACCGAGTTCTTGGAGTTTTCGGCAAGTCCGTCAAGGACAAAACGC
TGGAGTGCGATTGTGATATTCATCCATGGGAAATCAAAATCAACGGTGAA
CAATGGCCAGGAAAGATCCGCCTAATCGGGTTTGTGGATGTGTTCTTCCT
TTTCTCTTACTCGGCCAACGCACGTTTCGAGAAGGGAATCATTGTCTACA
AGGAAAGGTATGACCTCGAAAAGCTCCTCCAGCAAAGCGATGAAGCTCGT
GCGGAAGCTGGCGAGAAGACTTCCAAGGAAGATCTCGAGAATTCTAGCGA
AGAATATTCCGATACTTCTGCTACCCCAGAAACTCTCTTGTCAAGGCTTC
CGTGCCATGAAAGCAAGGAGGGAGTGATTCAGACTGAGGTGGTCGAACTC
GGTCGCGAGACGCCGAGCTCGTCTTCTCAGTCGGAGATCCAACAAGCCAC
AGACCAACCCACAAAGGATGACAAACGTCTGGACCGTCTAAAGTTTGGAA
ACACAACATTGTACAAAGTACGAAGCTTGGGCCACGAGGTGGGTCTCAAA
AACCGATATCCAGTTTCCTCTATTCAGGAATGGACCATCGAGATTAACAA
ACCCTACCATCGGGCGCTGAGACGACGCATTAAGCGTGCCATCAAGGAAC
ACACAACCACCGAGCTCTTGGAAGATGTGGTCCGATGTGGGTTTATCTCA
CATGGTCAGATGGCCGGCCACGTTCTATCCAAGTACCTCGTGGGTGGTGT
TTTGGATGACACTCTGACGAAGTATGTCGAGGGATTGGCGGTGGGAAATG
GAGCTGGAAGGGTGCCACTGGCTAACCAGGGGTACTGAATGGCTTCCTAT
CACCGAGTTCTTGGAGTTTTCGGCAAGTCCGTCAAGGACAAAACGCTGGA
GTGCGATTGTGATATTCATCCATGGGAAATCAAAATCAACGGTGAACAAT
GGCCAGGAAAGATCCGCCTAATCGGGTTTGTGGATGTGTTCTTCCTTTTC
TCTTACTCGGCCAACGCACGTTTCGAGAAGGGAATCATTGTCTACAAGGA
AAGGTATGACCTCGAAAAGCTCCTCCAGCAAAGCGATGAAGCTCGTGCGG
AAGCTGGCGAGAAGACTTCCAAGGAAGATCTCGAGAATTCTAGCGAAGAA
TATTCCGATACTTCTGCTACCCCAGAAACTCTCTTGTCAAGGCTTCCGTG
CCATGAAAGCAAGGAGGGAGTGATTCAGACTGAGGTGGTCGAACTCGGTC
GCGAGACGCCGAGCTCGTCTTCTCAGTCGGAGATCCAACAAGCCACAGAC
CAACCCACAAAGGATGACAAACGTCTGGACCGTCTAAAGTTTGGAAACAC
AACATTGTACAAAGTACGAAGCTTGGGCCACGAGGTGGGTCTCAAAAACC
GATATCCAGTTTCCTCTATTCAGGAATGGACCATCGAGATTAACAAACCC
TACCATCGGGCGCTGAGACGACGCATTAAGCGTGCCATCAAGGAACACAC
AACCACCGAGCTCTTGGAAGATGTGGTCCGATGTGGGTTTATCTCACATG
GTCAGATGGCCGGCCACGTTCTATCCAAGTACCTCGTGGGTGGTGTTTTG
GATGACACTCTGACGAAGTATGTCGAGGGATTGGCGGTGGGAAATGGAGC
TGGAAGGGTGCCACTGGCTAACCAGGGGTACTGAATGGCTTCCTATCACC
GAGTTCTTGGAGTTTTCGGCAAGTCCGTCAAGGACAAAACGCTGGAGTGC
GATTGTGATATTCATCCATGGGAAATCAAAATCAACGGTGAACAATGGCC
AGGAAAGATCCGCCTAATCGGGTTTGTGGATGTGTTCTTCCTTTTCTCTT
ACTCGGCCAACGCACGTTTCGAGAAGGGAATCATTGTCTACAAGGAAAGG
TATGACCTCGAAAAGCTCCTCCAGCAAAGCGATGAAGCTCGTGCGGAAGC
TGGCGAGAAGACTTCCAAGGAAGATCTCGAGAATTCTAGCGAAGAATATT
CCGATACTTCTGCTACCCCAGAAACTCTCTTGTCAAGGCTTCCGTGCCAT
GAAAGCAAGGAGGGAGTGATTCAGACTGAGGTGGTCGAACTCGGTCGCGA
GACGCCGAGCTCGTCTTCTCAGTCGGAGATCCAACAAGCCACAGACCAAC
CCACAAAGGATGACAAACGTCTGGACCGTCTAAAGTTTGGAAACACAACA
TTGTACAAAGTACGAAGCTTGGGCCACGAGGTGGGTCTCAAAAACCGATA
TCCAGTTTCCTCTATTCAGGAATGGACCATCGAGATTAACAAACCCTACC
ATCGGGCGCTGAGACGACGCATTAAGCGTGCCATCAAGGAACACACAACC
ACCGAGCTCTTGGAAGATGTGGTCCGATGTGGGTTTATCTCACATGGTCA
GATGGCCGGCCACGTTCTATCCAAGTACCTCGTGGGTGGTGTTTTGGATG
ACACTCTGACGAAGTATGTCGAGGGATTGGCGGTGGGAAATGGAGCTGGA
AGGGTGCCACTGGCTAACCAGGGGTACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006521-T2.utr5p1 | KJC3_006521-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006521-T2.utr3p1 | KJC3_006521-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5951890..5953600 + |
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