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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5985553..5986567+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006533-T1 ID=KJC3_006533-T1|Name=KJC3_006533-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1015bp|location=Sequence derived from alignment at ch4:5985553..5986567+ (Aspergillus niger KJC3)
ATGTCTCCTCATTCATCGCTCCCAGTAGGTTCCAAGCTCTGGGTAAGCGT
TGACCTATCCTTATCATTTGGAAAAGGACACCCACAGAAGCTTAACCGCA
CGAAGCTTCTCGACTCAGGAACTCTGGATATCGACGCCTCGTATGTCCTC
TCTGGTGCCAACGTCCCGAAAAGCAACCAACCGTCCCAGATCCATGACAC
TCGCCAATGTCTCATGATAGCTGCCCTCCTCTACCACCCAGACTTAGGCC
TCATCCTCTTTGACACAGGCGCCTGCGAAGATATAATCAACTCCTGGGAC
AAAGAATTCCTGGAGTGTGTGCCTCGCACATGGGTGAAGGACATCCATTC
GCTTCCAGCTGCAGTGAAGGCCACGGGGGCCGGAGACATCACGGATATCA
AGGCAGTGGTGATGAGCCACTTACACTTAGACCACGCTGGCGGGCTGGAA
CATTTTTTTTTTGGGGACAGGTGAGTAGTCTACTTCTCGGCCCTGCCTCA
TTCTAGACTACTAGATGTGGTCGAGGCATACACTCGCTCTCATAGCAAAG
AAGTGCGAAAGTTTAACCTTTTCTATAGATGTAGAGATCTGGTGTCACGA
AAAAGAACTCAAAAACGCCTTCTGGGCCTCGGCCACAGGCCACGATAGTG
GACTGTTCCGGCCAGATTACTTACGGGCTGACCTACTGAACTGGAAGACG
GTGTCCGAGCAGGTTGTTGAGCTCTGGTCCGGGGTCACGCTACATATGTG
TCCGGGGCATACTGAGGGATTCCTGGTAGTTGAGCTCAAGTTTCAGGTGG
CTGGGACTGTGGTGCTGACGGGGGACCTGTTCCATGTGAAAGAGAATTAT
GAGGATGGACAACCGCAGGGCTTTCTGATGAGGGACTATAATACGTGGCA
TCGGAGTAGGGATTACGTGAGAAGGCTGGTGCGGCAGACAAATGCGAAGG
TTTGTCTTGGTCATGAGAAGAGTTATTTTGACAAGTTTGTCAAGAGTCCG
GAGTATTTGGTTTAG back to topCoding sequence (CDS) from alignment at ch4:5985553..5986567+ >KJC3_006533-T1 ID=KJC3_006533-T1|Name=KJC3_006533-T1|organism=Aspergillus niger KJC3|type=CDS|length=1740bp|location=Sequence derived from alignment at ch4:5985553..5986567+ (Aspergillus niger KJC3)
ATGTCTCCTCATTCATCGCTCCCAGTAGGTTCCAAGCTCTGGGTAAGCGT
TGACCTATCCTTATCATTTGGAAAAGGACACCCACAGAAGCTTAACCGCA
CGAAGCTTCTCGACTCAGGAACTCTGGATATCGACGCCTCGTATGTCCTC
TCTGGTGCCAACGTCCCGAAAAGCAACCAACCGTCCCAGATCCATGACAC
TCGCCAATGTCTCATGATAGCTGCCCTCCTCTACCACCCAGACTTAGGCC
TCATCCTCTTTGACACAGGCGCCTGCGAAGATATAATCAACTCCTGGGAC
AAAGAATTCCTGGAGTGTGTGCCTCGCACATGGGTGAAGGACATCCATTC
GCTTCCAGCTGCAGTGAAGGCCACGGGGGCCGGAGACATCACGGATATCA
AGGCAGTGTGCGAAAGTTTAACCTTTTCTATAGATGTAGAGATCTGGTGT
CACGAAAAAGAACTCAAAAACGCCTTCTGGGCCTCGGCCACAGGCCACGA
TAGTGGACTGTTCCGGCCAGATTACTTACGGGCTGACCTACTGAACTGGA
AGACGGTGTCCGAGCAGGTTGTTGAGCTCTGGTCCGGGGTCACGCTACAT
ATGTGTCCGGGGCATACTGAGGGATTCCTGGTAGTTGAGCTCAAGTTTCA
GGTGGCTGGGACTGTGGTGCTGACGGGGGACCTGTTCCATGTGAAAGAGA
ATTATGAGGATGGACAACCGCAGGGCTTTCTGATGAGGGACTATAATACG
TGGCATCGGAGTAGGGATTACGTGAGAAGGCTGGTGCGGCAGACAAATGC
GAAGGTTTGTCTTGGTCATGAGAAGAGTTATTTTGACAAGTTTGTCAAGA
GTCCGGAGTATTTGGTTTAGATGTCTCCTCATTCATCGCTCCCAGTAGGT
TCCAAGCTCTGGGTAAGCGTTGACCTATCCTTATCATTTGGAAAAGGACA
CCCACAGAAGCTTAACCGCACGAAGCTTCTCGACTCAGGAACTCTGGATA
TCGACGCCTCGTATGTCCTCTCTGGTGCCAACGTCCCGAAAAGCAACCAA
CCGTCCCAGATCCATGACACTCGCCAATGTCTCATGATAGCTGCCCTCCT
CTACCACCCAGACTTAGGCCTCATCCTCTTTGACACAGGCGCCTGCGAAG
ATATAATCAACTCCTGGGACAAAGAATTCCTGGAGTGTGTGCCTCGCACA
TGGGTGAAGGACATCCATTCGCTTCCAGCTGCAGTGAAGGCCACGGGGGC
CGGAGACATCACGGATATCAAGGCAGTGTGCGAAAGTTTAACCTTTTCTA
TAGATGTAGAGATCTGGTGTCACGAAAAAGAACTCAAAAACGCCTTCTGG
GCCTCGGCCACAGGCCACGATAGTGGACTGTTCCGGCCAGATTACTTACG
GGCTGACCTACTGAACTGGAAGACGGTGTCCGAGCAGGTTGTTGAGCTCT
GGTCCGGGGTCACGCTACATATGTGTCCGGGGCATACTGAGGGATTCCTG
GTAGTTGAGCTCAAGTTTCAGGTGGCTGGGACTGTGGTGCTGACGGGGGA
CCTGTTCCATGTGAAAGAGAATTATGAGGATGGACAACCGCAGGGCTTTC
TGATGAGGGACTATAATACGTGGCATCGGAGTAGGGATTACGTGAGAAGG
CTGGTGCGGCAGACAAATGCGAAGGTTTGTCTTGGTCATGAGAAGAGTTA
TTTTGACAAGTTTGTCAAGAGTCCGGAGTATTTGGTTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036866 |
| DBxref | InterPro:IPR001279 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5985553..5986567 + |
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