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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5995987..5997727+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006538-T2 ID=KJC3_006538-T2|Name=KJC3_006538-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1741bp|location=Sequence derived from alignment at ch4:5995987..5997727+ (Aspergillus niger KJC3)
GCAGGTCTTACTTTTGTTGAAGGATCGACAGAGTTATCATCAACAGAGAC
CTTGGCAGAAACGTTGACAGCAGAAAACGTACTAGCCGAAAAGCGAGCAC
CATGGCTGGAGATAAAGTTAGAGACATGCACGTTGCTATTGTCGGTGGGT
TCAATCAACATATGTCGTGACCTCATATCACTCACGATGACCGATTCTAG
GCGCCGGCATTGGAGGCCTTGCGCTCGCCATGGGCCTGTATAGACAGGGT
GTGCCATTCACGGTCTACGAAGAAGAATCTCAATATTCCACTGTTGGGTA
GGTTTTCGCTCTGCTCTCCATCGGATAGACATTCGGCTCGTCTTTCTGAC
GGGTCAAAGCGCTGGCATAGGATTTGGGACCAATGGTGACTTGGCCTTGG
ACATGATCCAAGAGGGCTTTCTTCCTAAATTCGAGCGCTTCTGCATAGGT
AACAAGCCTAAAGATGCACAGAATATCTACTTTGAAGGGATGCTTCTCAG
GGAGGGTCTTGGTAAGTATCTTTTACCCTATGGTAAATTACTAAGTAGTC
TGCTGACTGTAAATCACCGCAGGGCTTACAGAGCCCTGGTACGGCAAGTC
ATCGTGGGGTCATCCGGATTACATTCGCAGAGCTGTCTGTTTTCTCTATG
TACACACTATCAAAGCTGAGCCACGCTAATGCTAACTTAGGCACATCGGA
ATGATGTCCTCCAAGCCATGACCAGCTTCATACCGATTGAGAAAGTCCGT
TTCAGCAAGCGCTTAACAAATATCGAACAGTATTCAAACAAGGTGGTCTT
ACACTTCGCGGATGGCGACACCTCGGAGGCAAGTATCCTGGTTGGTGCAG
ACGGCATCAAAAGCGTTGTGAGGAAGCATGTCCTATCACCAACGTACCCC
AGCCAGGTCGATCCAGTCTACGCTGGCTCGTACTGCTACCGCGGCGTGAT
ACCCATTTCTGAAGGCCAGGAGATCTTCGGCAACCTGACTGACGTAGCGA
AGATGTACCTCGGTGAGAAACGCTGTTGTGTTCATTATCTGATATCGGGT
GGAGAGGTATGTCCGACTTGTTTAGTAGATCAACCGCATAGCCCAGTTAC
ACTAACCTATTCCTCTTCTGGAAAACCAGGAACTCAACTTCCTCCTCTGC
GTAGCGGACAACAAGCCCTGGGAGCTGTCCAACGCAGTCACCCAAAAAGT
GACCTACGAGACAATGATGTCCGACTTCAATGACCCGAACATCGACGACC
GCTTCCGTCGACTCCTCCACAAAGCAAAACCAATCCGATGGGGCCTCTTC
CACCACCGCTATACCTCAACATACTACCGTGATCGCGTCGTCCTGCTAGG
CGATAGTGCCCATGCTTCGCTGCCTTTCCAGGCTGCCGGTGCTGGCCAGG
GACTGGAGGATGCATTAGTCCTCTCCAACGTGCTCGCTAAGATCTTCCTT
CATGCTCCGGATGGTGAGCTTTTGTATCCGTATATCTGTGCCGGGTTTGC
TGGGTATGATGCCGTAAGGAGGCCTAGGGCACAAAGACAGCTGGAACGGG
CACATGAGATGGCGATGATGCTTTACTATGAGCATCCGGAGACGGGGGCA
GATATGCATAAGGTGTTGGAGAAGTTGCAAGCTGGGTGGTTTGAGTGGTT
GTGGTTTCATGATTTGGGTAAGGATGTACGGGAGGCGGGGAGGGGAGTGG
ATGAGATTATAGAACGGAGTGGAGGTCGGTGTAGAATTTAG back to topCoding sequence (CDS) from alignment at ch4:5995987..5997727+ >KJC3_006538-T2 ID=KJC3_006538-T2|Name=KJC3_006538-T2|organism=Aspergillus niger KJC3|type=CDS|length=4596bp|location=Sequence derived from alignment at ch4:5995987..5997727+ (Aspergillus niger KJC3)
ATGATCCAAGAGGGCTTTCTTCCTAAATTCGAGCGCTTCTGCATAGGTAA
CAAGCCTAAAGATGCACAGAATATCTACTTTGAAGGGATGCTTCTCAGGG
AGGGTCTTGGGCTTACAGAGCCCTGGTACGGCAAGTCATCGTGGGGTCAT
CCGGATTACATTCGCAGAGCTGCACATCGGAATGATGTCCTCCAAGCCAT
GACCAGCTTCATACCGATTGAGAAAGTCCGTTTCAGCAAGCGCTTAACAA
ATATCGAACAGTATTCAAACAAGGTGGTCTTACACTTCGCGGATGGCGAC
ACCTCGGAGGCAAGTATCCTGGTTGGTGCAGACGGCATCAAAAGCGTTGT
GAGGAAGCATGTCCTATCACCAACGTACCCCAGCCAGGTCGATCCAGTCT
ACGCTGGCTCGTACTGCTACCGCGGCGTGATACCCATTTCTGAAGGCCAG
GAGATCTTCGGCAACCTGACTGACGTAGCGAAGATGTACCTCGGTGAGAA
ACGCTGTTGTGTTCATTATCTGATATCGGGTGGAGAGGAACTCAACTTCC
TCCTCTGCGTAGCGGACAACAAGCCCTGGGAGCTGTCCAACGCAGTCACC
CAAAAAGTGACCTACGAGACAATGATGTCCGACTTCAATGACCCGAACAT
CGACGACCGCTTCCGTCGACTCCTCCACAAAGCAAAACCAATCCGATGGG
GCCTCTTCCACCACCGCTATACCTCAACATACTACCGTGATCGCGTCGTC
CTGCTAGGCGATAGTGCCCATGCTTCGCTGCCTTTCCAGGCTGCCGGTGC
TGGCCAGGGACTGGAGGATGCATTAGTCCTCTCCAACGTGCTCGCTAAGA
TCTTCCTTCATGCTCCGGATGGTGAGCTTTTGTATCCGTATATCTGTGCC
GGGTTTGCTGGGTATGATGCCGTAAGGAGGCCTAGGGCACAAAGACAGCT
GGAACGGGCACATGAGATGGCGATGATGCTTTACTATGAGCATCCGGAGA
CGGGGGCAGATATGCATAAGGTGTTGGAGAAGTTGCAAGCTGGGTGGTTT
GAGTGGTTGTGGTTTCATGATTTGGGTAAGGATGTACGGGAGGCGGGGAG
GGGAGTGGATGAGATTATAGAACGGAGTGGAGGTCGGTGTAGAATTTAGA
TGATCCAAGAGGGCTTTCTTCCTAAATTCGAGCGCTTCTGCATAGGTAAC
AAGCCTAAAGATGCACAGAATATCTACTTTGAAGGGATGCTTCTCAGGGA
GGGTCTTGGGCTTACAGAGCCCTGGTACGGCAAGTCATCGTGGGGTCATC
CGGATTACATTCGCAGAGCTGCACATCGGAATGATGTCCTCCAAGCCATG
ACCAGCTTCATACCGATTGAGAAAGTCCGTTTCAGCAAGCGCTTAACAAA
TATCGAACAGTATTCAAACAAGGTGGTCTTACACTTCGCGGATGGCGACA
CCTCGGAGGCAAGTATCCTGGTTGGTGCAGACGGCATCAAAAGCGTTGTG
AGGAAGCATGTCCTATCACCAACGTACCCCAGCCAGGTCGATCCAGTCTA
CGCTGGCTCGTACTGCTACCGCGGCGTGATACCCATTTCTGAAGGCCAGG
AGATCTTCGGCAACCTGACTGACGTAGCGAAGATGTACCTCGGTGAGAAA
CGCTGTTGTGTTCATTATCTGATATCGGGTGGAGAGGAACTCAACTTCCT
CCTCTGCGTAGCGGACAACAAGCCCTGGGAGCTGTCCAACGCAGTCACCC
AAAAAGTGACCTACGAGACAATGATGTCCGACTTCAATGACCCGAACATC
GACGACCGCTTCCGTCGACTCCTCCACAAAGCAAAACCAATCCGATGGGG
CCTCTTCCACCACCGCTATACCTCAACATACTACCGTGATCGCGTCGTCC
TGCTAGGCGATAGTGCCCATGCTTCGCTGCCTTTCCAGGCTGCCGGTGCT
GGCCAGGGACTGGAGGATGCATTAGTCCTCTCCAACGTGCTCGCTAAGAT
CTTCCTTCATGCTCCGGATGGTGAGCTTTTGTATCCGTATATCTGTGCCG
GGTTTGCTGGGTATGATGCCGTAAGGAGGCCTAGGGCACAAAGACAGCTG
GAACGGGCACATGAGATGGCGATGATGCTTTACTATGAGCATCCGGAGAC
GGGGGCAGATATGCATAAGGTGTTGGAGAAGTTGCAAGCTGGGTGGTTTG
AGTGGTTGTGGTTTCATGATTTGGGTAAGGATGTACGGGAGGCGGGGAGG
GGAGTGGATGAGATTATAGAACGGAGTGGAGGTCGGTGTAGAATTTAGAT
GATCCAAGAGGGCTTTCTTCCTAAATTCGAGCGCTTCTGCATAGGTAACA
AGCCTAAAGATGCACAGAATATCTACTTTGAAGGGATGCTTCTCAGGGAG
GGTCTTGGGCTTACAGAGCCCTGGTACGGCAAGTCATCGTGGGGTCATCC
GGATTACATTCGCAGAGCTGCACATCGGAATGATGTCCTCCAAGCCATGA
CCAGCTTCATACCGATTGAGAAAGTCCGTTTCAGCAAGCGCTTAACAAAT
ATCGAACAGTATTCAAACAAGGTGGTCTTACACTTCGCGGATGGCGACAC
CTCGGAGGCAAGTATCCTGGTTGGTGCAGACGGCATCAAAAGCGTTGTGA
GGAAGCATGTCCTATCACCAACGTACCCCAGCCAGGTCGATCCAGTCTAC
GCTGGCTCGTACTGCTACCGCGGCGTGATACCCATTTCTGAAGGCCAGGA
GATCTTCGGCAACCTGACTGACGTAGCGAAGATGTACCTCGGTGAGAAAC
GCTGTTGTGTTCATTATCTGATATCGGGTGGAGAGGAACTCAACTTCCTC
CTCTGCGTAGCGGACAACAAGCCCTGGGAGCTGTCCAACGCAGTCACCCA
AAAAGTGACCTACGAGACAATGATGTCCGACTTCAATGACCCGAACATCG
ACGACCGCTTCCGTCGACTCCTCCACAAAGCAAAACCAATCCGATGGGGC
CTCTTCCACCACCGCTATACCTCAACATACTACCGTGATCGCGTCGTCCT
GCTAGGCGATAGTGCCCATGCTTCGCTGCCTTTCCAGGCTGCCGGTGCTG
GCCAGGGACTGGAGGATGCATTAGTCCTCTCCAACGTGCTCGCTAAGATC
TTCCTTCATGCTCCGGATGGTGAGCTTTTGTATCCGTATATCTGTGCCGG
GTTTGCTGGGTATGATGCCGTAAGGAGGCCTAGGGCACAAAGACAGCTGG
AACGGGCACATGAGATGGCGATGATGCTTTACTATGAGCATCCGGAGACG
GGGGCAGATATGCATAAGGTGTTGGAGAAGTTGCAAGCTGGGTGGTTTGA
GTGGTTGTGGTTTCATGATTTGGGTAAGGATGTACGGGAGGCGGGGAGGG
GAGTGGATGAGATTATAGAACGGAGTGGAGGTCGGTGTAGAATTTAGATG
ATCCAAGAGGGCTTTCTTCCTAAATTCGAGCGCTTCTGCATAGGTAACAA
GCCTAAAGATGCACAGAATATCTACTTTGAAGGGATGCTTCTCAGGGAGG
GTCTTGGGCTTACAGAGCCCTGGTACGGCAAGTCATCGTGGGGTCATCCG
GATTACATTCGCAGAGCTGCACATCGGAATGATGTCCTCCAAGCCATGAC
CAGCTTCATACCGATTGAGAAAGTCCGTTTCAGCAAGCGCTTAACAAATA
TCGAACAGTATTCAAACAAGGTGGTCTTACACTTCGCGGATGGCGACACC
TCGGAGGCAAGTATCCTGGTTGGTGCAGACGGCATCAAAAGCGTTGTGAG
GAAGCATGTCCTATCACCAACGTACCCCAGCCAGGTCGATCCAGTCTACG
CTGGCTCGTACTGCTACCGCGGCGTGATACCCATTTCTGAAGGCCAGGAG
ATCTTCGGCAACCTGACTGACGTAGCGAAGATGTACCTCGGTGAGAAACG
CTGTTGTGTTCATTATCTGATATCGGGTGGAGAGGAACTCAACTTCCTCC
TCTGCGTAGCGGACAACAAGCCCTGGGAGCTGTCCAACGCAGTCACCCAA
AAAGTGACCTACGAGACAATGATGTCCGACTTCAATGACCCGAACATCGA
CGACCGCTTCCGTCGACTCCTCCACAAAGCAAAACCAATCCGATGGGGCC
TCTTCCACCACCGCTATACCTCAACATACTACCGTGATCGCGTCGTCCTG
CTAGGCGATAGTGCCCATGCTTCGCTGCCTTTCCAGGCTGCCGGTGCTGG
CCAGGGACTGGAGGATGCATTAGTCCTCTCCAACGTGCTCGCTAAGATCT
TCCTTCATGCTCCGGATGGTGAGCTTTTGTATCCGTATATCTGTGCCGGG
TTTGCTGGGTATGATGCCGTAAGGAGGCCTAGGGCACAAAGACAGCTGGA
ACGGGCACATGAGATGGCGATGATGCTTTACTATGAGCATCCGGAGACGG
GGGCAGATATGCATAAGGTGTTGGAGAAGTTGCAAGCTGGGTGGTTTGAG
TGGTTGTGGTTTCATGATTTGGGTAAGGATGTACGGGAGGCGGGGAGGGG
AGTGGATGAGATTATAGAACGGAGTGGAGGTCGGTGTAGAATTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006538-T2.utr5p1 | KJC3_006538-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002938 |
| DBxref | InterPro:IPR036188 |
| DBxref | PFAM:PF01494 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5995987..5997727 + |
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