|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5997944..5999472- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006539-T1 ID=KJC3_006539-T1|Name=KJC3_006539-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1529bp|location=Sequence derived from alignment at ch4:5997944..5999472- (Aspergillus niger KJC3)
ATGGCAATAGGGACAGATGGCGTTATTTCTGCCGATCTTGCAACAGCATG
GTCTTCGATGACTGGGAAGGCATCCGAGAGGGGAACCCTTTGTGTCACTG
CCAGGAGATCTCTCGTCGGCAGATTGAGGGTGGTCGTGTCTTTGTGTTCC
GGTGCGCGAGGAATGACTGTGGGTTTAAGAGAGGGACTTGATGATGAGTA
GGCTTTGGCTCTGCTCATGGGATGCAAGTGCATTCGGATAACGCAGGGGC
TGTGGGAATCCGCAAAACACCCAACTGCATCTCCAATGAGATTGCCATAA
TGTTAGGCGTTTTTAGAGATGGAATATAAGACTCTGATGTGAAGGGGCCG
CGTATTCGGAAAAGGTGTTATAGTGTAATCCTAGACAGCTGCTGGGAAGC
CCTTGGACTAGTGACTTGATCGATTGGAAGGAGCTATGTTGGGTCCTGAA
GGGACCGAAGCTCATACAAAGTAATCCAAATGTAATCCATACCTATATTC
ACCTTTCTCTATCATATAATGTACTCACAGACCCCAGTCGCAGTCATCAT
CCACGCCGGCGTAGGCTGGCACACCCCCTCCGCAAAAGCCCCAATCACAG
GCCAAGGCACCCGCAAGGCCAGAACCGGCCATCCAGCCCACTATCTCCAA
ATCTCCGGGACACTCAATCTAAGTGCGGCCCCACACGGACGAATACACCG
ACACACATCTCCTCACCGACGAAGAAGACATCTACTCTCGAAAAGTACCG
CGAGTCTCGAGAGACTCATCCCCCACGCGTCGCCGACATCGCTGTCATCG
AGACCGGCGAGGCCGTCGGTGTAGCCACATATCTTATCATGGCGCCGACC
ATCTTCGGCCAAGGCACCGGCCCCTTCAATCGGTACTCGATGCAGCTCCT
ATCCATGATTGCGGACGCACTGAGCTCCGGTATCGTTAGCGGTATAGAGC
AAGGAAACACCGTATGGAGCCATGTTCACATCAGAGACCTGGTCGGCTTG
TTTATCGTGTTACTAAAGCAGATCTGCACTGGTGCTACGATCCCATCGGG
CAGGAAGGGCATCTACTTCTGCGAAACAGGCGAGCATACGCACCGAGAGT
TCTCGAAGCGTTTGGCTACTGCTGCTTATGAGCTGGGTGTATTGCCCTCC
TCCCATGTGAAGGAGATTAGTCTCGAGGAAGCGGCAGAGAAGTTGGTGTT
TGGCGGTGTCTCTACAGCTGAGCTGGGGTATGCTTCTAAGTGAGTTTGAG
CAGTCCCTTTCTTTCAGAATGATGACTTGTAAGTGGACGAAAAGATACTG
ACCTACTTTTCTTGTAGCGCTCGGACGAAGGCTATACTAAGCCGCAAATT
GGGTTGGATGTCCTTGCATGGCGATGATTGGGAAGCCACTTTCCGTGATG
AAGTCAGCGTGTTCATCAAGAGTCCTCCGGCTGAGCGTGATATCCCGGAG
TTTCTGAGGAAACACTAGATGTACATACTATGTCCTCATACATGAACTTC
TGAGGGCATCAGAGCACGAAGTATGTCAG back to topCoding sequence (CDS) from alignment at ch4:5997944..5999472- >KJC3_006539-T1 ID=KJC3_006539-T1|Name=KJC3_006539-T1|organism=Aspergillus niger KJC3|type=CDS|length=4440bp|location=Sequence derived from alignment at ch4:5997944..5999472- (Aspergillus niger KJC3)
CGCTCGGACGAAGGCTATACTAAGCCGCAAATTGGGTTGGATGTCCTTGC
ATGGCGATGATTGGGAAGCCACTTTCCGTGATGAAGTCAGCGTGTTCATC
AAGAGTCCTCCGGCTGAGCGTGATATCCCGGAGTTTCTGAGGAAACACTA
GACCCCAGTCGCAGTCATCATCCACGCCGGCGTAGGCTGGCACACCCCCT
CCGCAAAAGCCCCAATCACAGGCCAAGGCACCCGCAAGGCCAGAACCGGC
CATCCAGCCCACTATCTCCAAATCTCCGGGACACTCAATCTAAGTGCGGC
CCCACACGGACGAATACACCGACACACATCTCCTCACCGACGAAGAAGAC
ATCTACTCTCGAAAAGTACCGCGAGTCTCGAGAGACTCATCCCCCACGCG
TCGCCGACATCGCTGTCATCGAGACCGGCGAGGCCGTCGGTGTAGCCACA
TATCTTATCATGGCGCCGACCATCTTCGGCCAAGGCACCGGCCCCTTCAA
TCGGTACTCGATGCAGCTCCTATCCATGATTGCGGACGCACTGAGCTCCG
GTATCGTTAGCGGTATAGAGCAAGGAAACACCGTATGGAGCCATGTTCAC
ATCAGAGACCTGGTCGGCTTGTTTATCGTGTTACTAAAGCAGATCTGCAC
TGGTGCTACGATCCCATCGGGCAGGAAGGGCATCTACTTCTGCGAAACAG
GCGAGCATACGCACCGAGAGTTCTCGAAGCGTTTGGCTACTGCTGCTTAT
GAGCTGGGTGTATTGCCCTCCTCCCATGTGAAGGAGATTAGTCTCGAGGA
AGCGGCAGAGAAGTTGGTGTTTGGCGGTGTCTCTACAGCTGAGCTGGGGT
ATGCTTCTAACTGCTGGGAAGCCCTTGGACTAGTGACTTGATCGATTGGA
AGGAGCTATGTTGGGTCCTGAAGGGACCGAAGCTCATACAAAATGGCAAT
AGGGACAGATGGCGTTATTTCTGCCGATCTTGCAACAGCATGGTCTTCGA
TGACTGGGAAGGCATCCGAGAGGGGAACCCTTTGTGTCACTGCCAGGAGA
TCTCTCGTCGGCAGATTGAGGGTGGTCGTGTCTTTGTGTTCCGGTGCGCG
AGGAATGACTCGCTCGGACGAAGGCTATACTAAGCCGCAAATTGGGTTGG
ATGTCCTTGCATGGCGATGATTGGGAAGCCACTTTCCGTGATGAAGTCAG
CGTGTTCATCAAGAGTCCTCCGGCTGAGCGTGATATCCCGGAGTTTCTGA
GGAAACACTAGACCCCAGTCGCAGTCATCATCCACGCCGGCGTAGGCTGG
CACACCCCCTCCGCAAAAGCCCCAATCACAGGCCAAGGCACCCGCAAGGC
CAGAACCGGCCATCCAGCCCACTATCTCCAAATCTCCGGGACACTCAATC
TAAGTGCGGCCCCACACGGACGAATACACCGACACACATCTCCTCACCGA
CGAAGAAGACATCTACTCTCGAAAAGTACCGCGAGTCTCGAGAGACTCAT
CCCCCACGCGTCGCCGACATCGCTGTCATCGAGACCGGCGAGGCCGTCGG
TGTAGCCACATATCTTATCATGGCGCCGACCATCTTCGGCCAAGGCACCG
GCCCCTTCAATCGGTACTCGATGCAGCTCCTATCCATGATTGCGGACGCA
CTGAGCTCCGGTATCGTTAGCGGTATAGAGCAAGGAAACACCGTATGGAG
CCATGTTCACATCAGAGACCTGGTCGGCTTGTTTATCGTGTTACTAAAGC
AGATCTGCACTGGTGCTACGATCCCATCGGGCAGGAAGGGCATCTACTTC
TGCGAAACAGGCGAGCATACGCACCGAGAGTTCTCGAAGCGTTTGGCTAC
TGCTGCTTATGAGCTGGGTGTATTGCCCTCCTCCCATGTGAAGGAGATTA
GTCTCGAGGAAGCGGCAGAGAAGTTGGTGTTTGGCGGTGTCTCTACAGCT
GAGCTGGGGTATGCTTCTAACTGCTGGGAAGCCCTTGGACTAGTGACTTG
ATCGATTGGAAGGAGCTATGTTGGGTCCTGAAGGGACCGAAGCTCATACA
AAATGGCAATAGGGACAGATGGCGTTATTTCTGCCGATCTTGCAACAGCA
TGGTCTTCGATGACTGGGAAGGCATCCGAGAGGGGAACCCTTTGTGTCAC
TGCCAGGAGATCTCTCGTCGGCAGATTGAGGGTGGTCGTGTCTTTGTGTT
CCGGTGCGCGAGGAATGACTCGCTCGGACGAAGGCTATACTAAGCCGCAA
ATTGGGTTGGATGTCCTTGCATGGCGATGATTGGGAAGCCACTTTCCGTG
ATGAAGTCAGCGTGTTCATCAAGAGTCCTCCGGCTGAGCGTGATATCCCG
GAGTTTCTGAGGAAACACTAGACCCCAGTCGCAGTCATCATCCACGCCGG
CGTAGGCTGGCACACCCCCTCCGCAAAAGCCCCAATCACAGGCCAAGGCA
CCCGCAAGGCCAGAACCGGCCATCCAGCCCACTATCTCCAAATCTCCGGG
ACACTCAATCTAAGTGCGGCCCCACACGGACGAATACACCGACACACATC
TCCTCACCGACGAAGAAGACATCTACTCTCGAAAAGTACCGCGAGTCTCG
AGAGACTCATCCCCCACGCGTCGCCGACATCGCTGTCATCGAGACCGGCG
AGGCCGTCGGTGTAGCCACATATCTTATCATGGCGCCGACCATCTTCGGC
CAAGGCACCGGCCCCTTCAATCGGTACTCGATGCAGCTCCTATCCATGAT
TGCGGACGCACTGAGCTCCGGTATCGTTAGCGGTATAGAGCAAGGAAACA
CCGTATGGAGCCATGTTCACATCAGAGACCTGGTCGGCTTGTTTATCGTG
TTACTAAAGCAGATCTGCACTGGTGCTACGATCCCATCGGGCAGGAAGGG
CATCTACTTCTGCGAAACAGGCGAGCATACGCACCGAGAGTTCTCGAAGC
GTTTGGCTACTGCTGCTTATGAGCTGGGTGTATTGCCCTCCTCCCATGTG
AAGGAGATTAGTCTCGAGGAAGCGGCAGAGAAGTTGGTGTTTGGCGGTGT
CTCTACAGCTGAGCTGGGGTATGCTTCTAACTGCTGGGAAGCCCTTGGAC
TAGTGACTTGATCGATTGGAAGGAGCTATGTTGGGTCCTGAAGGGACCGA
AGCTCATACAAAATGGCAATAGGGACAGATGGCGTTATTTCTGCCGATCT
TGCAACAGCATGGTCTTCGATGACTGGGAAGGCATCCGAGAGGGGAACCC
TTTGTGTCACTGCCAGGAGATCTCTCGTCGGCAGATTGAGGGTGGTCGTG
TCTTTGTGTTCCGGTGCGCGAGGAATGACTCGCTCGGACGAAGGCTATAC
TAAGCCGCAAATTGGGTTGGATGTCCTTGCATGGCGATGATTGGGAAGCC
ACTTTCCGTGATGAAGTCAGCGTGTTCATCAAGAGTCCTCCGGCTGAGCG
TGATATCCCGGAGTTTCTGAGGAAACACTAGACCCCAGTCGCAGTCATCA
TCCACGCCGGCGTAGGCTGGCACACCCCCTCCGCAAAAGCCCCAATCACA
GGCCAAGGCACCCGCAAGGCCAGAACCGGCCATCCAGCCCACTATCTCCA
AATCTCCGGGACACTCAATCTAAGTGCGGCCCCACACGGACGAATACACC
GACACACATCTCCTCACCGACGAAGAAGACATCTACTCTCGAAAAGTACC
GCGAGTCTCGAGAGACTCATCCCCCACGCGTCGCCGACATCGCTGTCATC
GAGACCGGCGAGGCCGTCGGTGTAGCCACATATCTTATCATGGCGCCGAC
CATCTTCGGCCAAGGCACCGGCCCCTTCAATCGGTACTCGATGCAGCTCC
TATCCATGATTGCGGACGCACTGAGCTCCGGTATCGTTAGCGGTATAGAG
CAAGGAAACACCGTATGGAGCCATGTTCACATCAGAGACCTGGTCGGCTT
GTTTATCGTGTTACTAAAGCAGATCTGCACTGGTGCTACGATCCCATCGG
GCAGGAAGGGCATCTACTTCTGCGAAACAGGCGAGCATACGCACCGAGAG
TTCTCGAAGCGTTTGGCTACTGCTGCTTATGAGCTGGGTGTATTGCCCTC
CTCCCATGTGAAGGAGATTAGTCTCGAGGAAGCGGCAGAGAAGTTGGTGT
TTGGCGGTGTCTCTACAGCTGAGCTGGGGTATGCTTCTAACTGCTGGGAA
GCCCTTGGACTAGTGACTTGATCGATTGGAAGGAGCTATGTTGGGTCCTG
AAGGGACCGAAGCTCATACAAAATGGCAATAGGGACAGATGGCGTTATTT
CTGCCGATCTTGCAACAGCATGGTCTTCGATGACTGGGAAGGCATCCGAG
AGGGGAACCCTTTGTGTCACTGCCAGGAGATCTCTCGTCGGCAGATTGAG
GGTGGTCGTGTCTTTGTGTTCCGGTGCGCGAGGAATGACT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006539-T1.utr3p1 | KJC3_006539-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5997944..5999472 - |
|
