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KJC3_006545-T1, KJC3_006545-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006545-T1
Unique NameKJC3_006545-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:6010743..6011701+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006545-T1 ID=KJC3_006545-T1|Name=KJC3_006545-T1|organism=Aspergillus niger KJC3|type=mRNA|length=959bp|location=Sequence derived from alignment at ch4:6010743..6011701+ (Aspergillus niger KJC3)
AAGAAATTAAATGACTTTGCACAATTGCCAGAGATAAAATGTCCGCGCCG
ATCATGAATGTCTTTCTGCGACGGGGCAGTCCTGCCGTGACGTCAACATT
CGTCAGGCGCATCGCTCTATACAACAATCCCAGATTTCTCAATTATAACC
TCAACAATGATTTTCATTCAATTACTGCACATAACATACCAAGAAGAATC
GCTCTATATCATCAAACCCATCGATACTCAACCAAGATGCAATCCTACCC
TGGTTCCTGCTTCTGTCACAAAATCACCTATAACCTCAACCTCTCGTCTC
CCGACGATGCCCGCACGTCCCTCTGCCATTGCAGCAGCTGCAAGGTTAGC
CAGATAGCTCCACGGTTCTGATCTACGATCTACACCTAAACTTTGTCCAC
AAGGTGTTCAATTGACTAACACCTTTCGGGGTTATAGAAAGCTTTCGGAA
CAAACTACGGTCTAACCGCCAAGGTCCCCAAAGATGCCCTTCAGATCACA
TCCGGTAAGCTTAAGGAATACGTGGGTGATAATGGGTCTGGAAGTATGAT
ACATCGGGAGTTTTGTGGCGATTGTGGGAGCTATATTTGCGAGTATGGGG
TATGTTCGTTCGCTCTAAGGGGGCTCGTTTGTGGGAGTGGCATAAGTGCT
CTGCTAATGGGTCTTGGACAGGATGCTGTCAAGAATGATTTCCGGTATAT
TTGTGTAGGGACATTGGATGATCCGGAAGTGTTGCCGCCGAAGGGAGAGT
TTTTCTGTCAGAGTAGGGTTCGTTGGATGCCGGAGATTCCGGGTGAGTGT
CTGGTCTGTCTTGTCTTCATGGTGCGCAATAACTAATTTGGTTCGTAGAT
GTTTTTCACAAAAGCAAGATCAAGGAGTAAAGAGTCCGCTCCGATCATCG
CCCGAATCTAGCTTCCTTTCAGTGTGAAGATGTCCCATTATGAGCGCTTT
GTATTGTAG
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Coding sequence (CDS) from alignment at ch4:6010743..6011701+

>KJC3_006545-T1 ID=KJC3_006545-T1|Name=KJC3_006545-T1|organism=Aspergillus niger KJC3|type=CDS|length=2484bp|location=Sequence derived from alignment at ch4:6010743..6011701+ (Aspergillus niger KJC3)
ATGTCCGCGCCGATCATGAATGTCTTTCTGCGACGGGGCAGTCCTGCCGT
GACGTCAACATTCGTCAGGCGCATCGCTCTATACAACAATCCCAGATTTC
TCAATTATAACCTCAACAATGATTTTCATTCAATTACTGCACATAACATA
CCAAGAAGAATCGCTCTATATCATCAAACCCATCGATACTCAACCAAGAT
GCAATCCTACCCTGGTTCCTGCTTCTGTCACAAAATCACCTATAACCTCA
ACCTCTCGTCTCCCGACGATGCCCGCACGTCCCTCTGCCATTGCAGCAGC
TGCAAGAAAGCTTTCGGAACAAACTACGGTCTAACCGCCAAGGTCCCCAA
AGATGCCCTTCAGATCACATCCGGTAAGCTTAAGGAATACGTGGGTGATA
ATGGGTCTGGAAGTATGATACATCGGGAGTTTTGTGGCGATTGTGGGAGC
TATATTTGCGAGTATGGGGATGCTGTCAAGAATGATTTCCGGTATATTTG
TGTAGGGACATTGGATGATCCGGAAGTGTTGCCGCCGAAGGGAGAGTTTT
TCTGTCAGAGTAGGGTTCGTTGGATGCCGGAGATTCCGGATGTTTTTCAC
AAAAGCAAGATCAAGGAGTAAATGTCCGCGCCGATCATGAATGTCTTTCT
GCGACGGGGCAGTCCTGCCGTGACGTCAACATTCGTCAGGCGCATCGCTC
TATACAACAATCCCAGATTTCTCAATTATAACCTCAACAATGATTTTCAT
TCAATTACTGCACATAACATACCAAGAAGAATCGCTCTATATCATCAAAC
CCATCGATACTCAACCAAGATGCAATCCTACCCTGGTTCCTGCTTCTGTC
ACAAAATCACCTATAACCTCAACCTCTCGTCTCCCGACGATGCCCGCACG
TCCCTCTGCCATTGCAGCAGCTGCAAGAAAGCTTTCGGAACAAACTACGG
TCTAACCGCCAAGGTCCCCAAAGATGCCCTTCAGATCACATCCGGTAAGC
TTAAGGAATACGTGGGTGATAATGGGTCTGGAAGTATGATACATCGGGAG
TTTTGTGGCGATTGTGGGAGCTATATTTGCGAGTATGGGGATGCTGTCAA
GAATGATTTCCGGTATATTTGTGTAGGGACATTGGATGATCCGGAAGTGT
TGCCGCCGAAGGGAGAGTTTTTCTGTCAGAGTAGGGTTCGTTGGATGCCG
GAGATTCCGGATGTTTTTCACAAAAGCAAGATCAAGGAGTAAATGTCCGC
GCCGATCATGAATGTCTTTCTGCGACGGGGCAGTCCTGCCGTGACGTCAA
CATTCGTCAGGCGCATCGCTCTATACAACAATCCCAGATTTCTCAATTAT
AACCTCAACAATGATTTTCATTCAATTACTGCACATAACATACCAAGAAG
AATCGCTCTATATCATCAAACCCATCGATACTCAACCAAGATGCAATCCT
ACCCTGGTTCCTGCTTCTGTCACAAAATCACCTATAACCTCAACCTCTCG
TCTCCCGACGATGCCCGCACGTCCCTCTGCCATTGCAGCAGCTGCAAGAA
AGCTTTCGGAACAAACTACGGTCTAACCGCCAAGGTCCCCAAAGATGCCC
TTCAGATCACATCCGGTAAGCTTAAGGAATACGTGGGTGATAATGGGTCT
GGAAGTATGATACATCGGGAGTTTTGTGGCGATTGTGGGAGCTATATTTG
CGAGTATGGGGATGCTGTCAAGAATGATTTCCGGTATATTTGTGTAGGGA
CATTGGATGATCCGGAAGTGTTGCCGCCGAAGGGAGAGTTTTTCTGTCAG
AGTAGGGTTCGTTGGATGCCGGAGATTCCGGATGTTTTTCACAAAAGCAA
GATCAAGGAGTAAATGTCCGCGCCGATCATGAATGTCTTTCTGCGACGGG
GCAGTCCTGCCGTGACGTCAACATTCGTCAGGCGCATCGCTCTATACAAC
AATCCCAGATTTCTCAATTATAACCTCAACAATGATTTTCATTCAATTAC
TGCACATAACATACCAAGAAGAATCGCTCTATATCATCAAACCCATCGAT
ACTCAACCAAGATGCAATCCTACCCTGGTTCCTGCTTCTGTCACAAAATC
ACCTATAACCTCAACCTCTCGTCTCCCGACGATGCCCGCACGTCCCTCTG
CCATTGCAGCAGCTGCAAGAAAGCTTTCGGAACAAACTACGGTCTAACCG
CCAAGGTCCCCAAAGATGCCCTTCAGATCACATCCGGTAAGCTTAAGGAA
TACGTGGGTGATAATGGGTCTGGAAGTATGATACATCGGGAGTTTTGTGG
CGATTGTGGGAGCTATATTTGCGAGTATGGGGATGCTGTCAAGAATGATT
TCCGGTATATTTGTGTAGGGACATTGGATGATCCGGAAGTGTTGCCGCCG
AAGGGAGAGTTTTTCTGTCAGAGTAGGGTTCGTTGGATGCCGGAGATTCC
GGATGTTTTTCACAAAAGCAAGATCAAGGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016846carbon-sulfur lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006545KJC3_006545Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006545-T1KJC3_006545-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006545-T1.utr5p1KJC3_006545-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006545-T1.exon1KJC3_006545-T1.exon1Aspergillus niger KJC3exon
KJC3_006545-T1.exon2KJC3_006545-T1.exon2Aspergillus niger KJC3exon
KJC3_006545-T1.exon3KJC3_006545-T1.exon3Aspergillus niger KJC3exon
KJC3_006545-T1.exon4KJC3_006545-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006545-T1.cdsKJC3_006545-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006545-T1.utr3p1KJC3_006545-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011057
DBxrefInterPro:IPR006913
DBxrefPFAM:PF04828
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:6010743..6011701 +
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