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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:6030180..6033922+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006557-T1 ID=KJC3_006557-T1|Name=KJC3_006557-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3743bp|location=Sequence derived from alignment at ch4:6030180..6033922+ (Aspergillus niger KJC3)
CCAAATGATCGGGCCTCGAGAGCACCGTTTTGGTTACTATTTCGAATGAT
TAGAAAGGCGACTGACTGCTTTACGCACGCCGTGATGTCGCTAATCCCCC
GCCGGTTATTCTCGTCTTTTCTTGAGGTGACCCTCCAACTTCCGCCATGC
CGGCACCAAGAAACAACGGCGTGGTCAGCCCATCCCCACCCAGTGTCTAG
ACTCCATTAGCCTACAACGTCGGCTCATACTCTGCTGGAAAAGAAGGCAT
GTTCCTAAAATAATTCGCCTTTCACGAATGAGTACTTCCATCCCCGATCA
CAGCCCAGGGCACGGAGTGGTGCCCCGGATCGGCAATCTCGTCCGGTTGC
TCAGCGATCGCGACCTGTCACTTGTTGCCTCTGATGGGTTGGGAATGTGA
CGGTTGCCGGGATAGTGGCAGGAACATCACCAATTATTCTCTTTTACTCG
GTCGCTGGGTTTGATAGTCCACAAAGGGAGTTTAAAACCGACATGCAGCA
GGTTCCCATTAAAATTAGGACCTGGTTTGTCCAACGTGAAGAAAAACACT
ATCCTTGTGCTAGTCGAATCTTTGGGCTTCTCCTGTTTCATGTCATCCCG
CCGAGCTCTCTGGTCGTGTTTCAGGCTCCACCATCGCGGTGTTGACTCTT
TGTCGCCGATCCACCCGACATGCCTGGCCAAAGAATGAAGGCTGTGGACT
CATCAAGATGCATTCTGTCTGTAACCTTCTTTCTGCTCTGATTCGTCGTG
TACCTGCCGACCCCTCCCAGGCACGAACCGTCGTCCTCCCAATGGGCGCC
AACGAGCCGCCCAGTGAATGGCCCAGGCGACAAGAACACTCAAGCTGATT
TGCTATGGATCTTGAGAATAATGCTAGTGGCCTGCAGCCACCTGGGCAGA
AGCCACGCTAATTTTGATGTCGGGGTGTTGCTGTTATTATTTGTATATCG
CCCGGCCTACCCCCCCCCCGGTCTGCGTCATGCTCCCACATTGTTGTGTA
CATTCTCTACGTATTTCTCCTTGCGCCCATCTTTTCCCTACTTACGTTCT
CTATTTTCTTATTTTTGACTCGCAGATTGATTTCTGCACTTTCGTGCTAC
CTTCTTTTTTGCACATTGTACGCCTAGAGGGCTACGTTCCATTCCTTTTC
GTTCTAAACGTCGATCGTTTTCAAATAAACCTCCGTTCCTAAATCCTCTG
GTTATCCTAATCCTTCCAAGTCCTCGGGGCTTACCTTCTCTAACCACGCA
ATTGCTTGACCGAACATAGTGACCATGCCTACCTCAACTCTACTATGGAG
CGTAGGGTCCCTCGCTCTTTCATCGATGGTCCTGCCCGCCGCAGCCAGCA
GTTATCAACTTGTGGAAACCTGGAAGGGCGAGGACTTCCTGACGGCTTTC
GATTTTTACACAGGCGCTGACCCCACGAATGGATTCGTCACGTACGCTAA
CCAGAGCTACGCCGAAAGCACCGGGCTGGTCAAGGTCAACTCTAACGGTA
CCTTCTACATGGGTGTCGACCATACAACGAAGCTGAGCACCAACGGTCCT
GGCCGGGAGTCGGTCCGCATTGGGAGCAACAAGTATTATGACGAAGGACT
GTTTATCATCGATCTTCAGCACATGCCCGGAAGCGTCTGCGGTACCTGGC
CCGCCTTTTGGTCCACAGGCAAAAACTGGCCGGCGGATGGTGAAATAGAT
ATCATCGAGGGCGTCAATAAGAATGAAGCGAACGAGATTGTCCTGCATAC
GAGCGGCACCTGTCAAGTTTCCAGCCAGAAGATGAGCGGCACGCTTACCT
CTACGGAATGTGGTGAAGATGCGGGTACCACTGGATGTGTTGTTGAGGGC
ACCCAAGGTTCTTCTGGCACTCCGTTCAACGAGAACGGTGGTGGTGTCTA
CGCCATGCAGTGGACCGATGAATTCCTGAAGTTCTGGTTCTTCCCCCGTG
GTTCGATTCCCAGCTCTATCACCAAAGGCGACCCCGATGTTGCTGCTTTC
GGCACTCCCATGGCCCATATGGAGGGCTCGTGCAGCATCGCCGAACATTT
CAAAGCCCAGCAATTCATCTTCGACACCACCTTCTGCGGTGACTGGGCTG
GCGGTGTTTACAGCACCTCGGGCTGCCCTGTGAGTGATAGCAGCAGCTCC
TTCAAGAGCTGCGTTGCTTATGTCGCTGAGAACCCAACGGCGTTCGCGGA
GTCTTACTGGGAAATCAATTACATCAAGATTTACCAGACTGGTGTTGCAG
CCTCCGCTTCCGCTTCCGCTTCCCACGTCGAATCCGCAGCTAGTGTTGCT
GAGACGATCTCCGCTGTTAGGGAAGGCACTAACTCCGTCGTTGCGACCAC
TGCCGCTGCCACTATTGCTGTCACCAACACCGCTGATGCCGAGACTGCTA
CAACCATGGCTGAAGCCACTACTGTCGCCGCATCTACCGAGACCTCTGCC
GCCGATGAGAACGGTTCTTCTGCCTCGACCTCGACTCACTATGTTACTAT
GACCACCACTATCTGCCCTATTGCCGAGAGCTCCTCTGCGGCGGCCGCTC
TTGCTGGCGGAAGCTCCGAGGCTACCGAGGCTAGCAACAGCGAAGGCAGT
CCTGCGGCTGCAACCCCATCTAGCGTCACTGGCGCTAGCGCTGAGGCTAA
TGAAAGTGAGAGCACTTCTGCCGCTGTAACTACTCCCTCGACTGCTACTG
GCGCAAGCGCCGAAGCAAATGGTAGCGAGAGCTCATCTGCTTCCGAAGCA
GGCAGCGTTGCTGGTGCTACACCGTCTAGTGTCAGCACCACTGGTGCAAG
TGGCGAAGCAGACAGTAGCGAGGGTGCCTCTGCTGCTGCTACACCGTCTA
ATGTCAGCAGCACTGGTGCGAGCGCAGAAGCGAATGGCAGCGAGGACTCT
TCTGCTTCTTCTGAGGCCAAGACTGTCGCTTCTGCCACCCCATCCAGCGT
CACTGGTGCAAGCGCCGAGGCGAATGGAAATGACAGCGCCTCTTCCAATG
CTGCGACCGCATCCAATGTGAGCGGCGCCAGCGCACAAGCCGGTGATAAT
GAGAGCACCCCTGCATCTGCTGGCGCTAATGCCGGCTCTTCTGCTGCGCC
TTCCTCCGTTAGTGGTGCAAGTGCGGAAGCTAACGGTAGCGAGGGCAGCT
CCAGCCATTCGTCGGGCTCCCAGGCCGGAGCTCACTCCTATGGGTCTGTA
CCCTCCAGTGCTGCTGCATACGGTAGACCTGCTCCAAGCTCGTCCAGCCA
TGCATTTGCCACTGCACCCTCATCTAGTGGTTCGAGTCGTGTTCCGACCT
CCGCTGCCGCTGCCAACAATGCTGCCGCTGCTACCCAGGGTAGCTCTGCT
TCCGGATCTAATTCTGGCTCCTCTGGCCATGGTTCCTCGTCTGCTACTAC
TCCCTCGACACCTGTCTTCACCGGTGGTGCAAGCAAGTTGACTCTTGGTG
CATCCAGCGTTCTCAGCGTTCTTGCTTTTGCTTTGTTGGCTTAAAGGGGC
GATTTTGGCTTTTTGTTGATTACCCGCATTCATTTTGCTTCTTCCCTATT
ACAAGTCGTCGGAGAGGCTTTGTTTGCAACCTAGTGTTTTTGTAAGTACT
ATAGGCTGGTTGCCTTGCTTGAAGCATCTCACTTGTCGCCCTGGTCCACC
CCTTTCGTCGCGTGCGATATCCGCTTTCTTTCGGCTATACTTTGAAATAC
CGAGCTTAGATAGTTAATCAAATAGAATACGATATACTATCCA back to topCoding sequence (CDS) from alignment at ch4:6030180..6033922+ >KJC3_006557-T1 ID=KJC3_006557-T1|Name=KJC3_006557-T1|organism=Aspergillus niger KJC3|type=CDS|length=2220bp|location=Sequence derived from alignment at ch4:6030180..6033922+ (Aspergillus niger KJC3)
ATGCCTACCTCAACTCTACTATGGAGCGTAGGGTCCCTCGCTCTTTCATC
GATGGTCCTGCCCGCCGCAGCCAGCAGTTATCAACTTGTGGAAACCTGGA
AGGGCGAGGACTTCCTGACGGCTTTCGATTTTTACACAGGCGCTGACCCC
ACGAATGGATTCGTCACGTACGCTAACCAGAGCTACGCCGAAAGCACCGG
GCTGGTCAAGGTCAACTCTAACGGTACCTTCTACATGGGTGTCGACCATA
CAACGAAGCTGAGCACCAACGGTCCTGGCCGGGAGTCGGTCCGCATTGGG
AGCAACAAGTATTATGACGAAGGACTGTTTATCATCGATCTTCAGCACAT
GCCCGGAAGCGTCTGCGGTACCTGGCCCGCCTTTTGGTCCACAGGCAAAA
ACTGGCCGGCGGATGGTGAAATAGATATCATCGAGGGCGTCAATAAGAAT
GAAGCGAACGAGATTGTCCTGCATACGAGCGGCACCTGTCAAGTTTCCAG
CCAGAAGATGAGCGGCACGCTTACCTCTACGGAATGTGGTGAAGATGCGG
GTACCACTGGATGTGTTGTTGAGGGCACCCAAGGTTCTTCTGGCACTCCG
TTCAACGAGAACGGTGGTGGTGTCTACGCCATGCAGTGGACCGATGAATT
CCTGAAGTTCTGGTTCTTCCCCCGTGGTTCGATTCCCAGCTCTATCACCA
AAGGCGACCCCGATGTTGCTGCTTTCGGCACTCCCATGGCCCATATGGAG
GGCTCGTGCAGCATCGCCGAACATTTCAAAGCCCAGCAATTCATCTTCGA
CACCACCTTCTGCGGTGACTGGGCTGGCGGTGTTTACAGCACCTCGGGCT
GCCCTGTGAGTGATAGCAGCAGCTCCTTCAAGAGCTGCGTTGCTTATGTC
GCTGAGAACCCAACGGCGTTCGCGGAGTCTTACTGGGAAATCAATTACAT
CAAGATTTACCAGACTGGTGTTGCAGCCTCCGCTTCCGCTTCCGCTTCCC
ACGTCGAATCCGCAGCTAGTGTTGCTGAGACGATCTCCGCTGTTAGGGAA
GGCACTAACTCCGTCGTTGCGACCACTGCCGCTGCCACTATTGCTGTCAC
CAACACCGCTGATGCCGAGACTGCTACAACCATGGCTGAAGCCACTACTG
TCGCCGCATCTACCGAGACCTCTGCCGCCGATGAGAACGGTTCTTCTGCC
TCGACCTCGACTCACTATGTTACTATGACCACCACTATCTGCCCTATTGC
CGAGAGCTCCTCTGCGGCGGCCGCTCTTGCTGGCGGAAGCTCCGAGGCTA
CCGAGGCTAGCAACAGCGAAGGCAGTCCTGCGGCTGCAACCCCATCTAGC
GTCACTGGCGCTAGCGCTGAGGCTAATGAAAGTGAGAGCACTTCTGCCGC
TGTAACTACTCCCTCGACTGCTACTGGCGCAAGCGCCGAAGCAAATGGTA
GCGAGAGCTCATCTGCTTCCGAAGCAGGCAGCGTTGCTGGTGCTACACCG
TCTAGTGTCAGCACCACTGGTGCAAGTGGCGAAGCAGACAGTAGCGAGGG
TGCCTCTGCTGCTGCTACACCGTCTAATGTCAGCAGCACTGGTGCGAGCG
CAGAAGCGAATGGCAGCGAGGACTCTTCTGCTTCTTCTGAGGCCAAGACT
GTCGCTTCTGCCACCCCATCCAGCGTCACTGGTGCAAGCGCCGAGGCGAA
TGGAAATGACAGCGCCTCTTCCAATGCTGCGACCGCATCCAATGTGAGCG
GCGCCAGCGCACAAGCCGGTGATAATGAGAGCACCCCTGCATCTGCTGGC
GCTAATGCCGGCTCTTCTGCTGCGCCTTCCTCCGTTAGTGGTGCAAGTGC
GGAAGCTAACGGTAGCGAGGGCAGCTCCAGCCATTCGTCGGGCTCCCAGG
CCGGAGCTCACTCCTATGGGTCTGTACCCTCCAGTGCTGCTGCATACGGT
AGACCTGCTCCAAGCTCGTCCAGCCATGCATTTGCCACTGCACCCTCATC
TAGTGGTTCGAGTCGTGTTCCGACCTCCGCTGCCGCTGCCAACAATGCTG
CCGCTGCTACCCAGGGTAGCTCTGCTTCCGGATCTAATTCTGGCTCCTCT
GGCCATGGTTCCTCGTCTGCTACTACTCCCTCGACACCTGTCTTCACCGG
TGGTGCAAGCAAGTTGACTCTTGGTGCATCCAGCGTTCTCAGCGTTCTTG
CTTTTGCTTTGTTGGCTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006557-T1.utr5p1 | KJC3_006557-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006557-T1.utr3p1 | KJC3_006557-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.12 |
| Note | SECRETED:SignalP(1-24) |
| Note | CAZy:GH16 |
| DBxref | InterPro:IPR013320 |
| DBxref | InterPro:IPR000757 |
| DBxref | PFAM:PF00722 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:6030180..6033922 + |
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