You are here

Home

KJC3_006572-T1, KJC3_006572-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006572-T1
Unique NameKJC3_006572-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:6085809..6087627+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006572-T1 ID=KJC3_006572-T1|Name=KJC3_006572-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1819bp|location=Sequence derived from alignment at ch4:6085809..6087627+ (Aspergillus niger KJC3)
ATGTTGATTGGCAACATCTACGTGATTGCGAGCGTCGCCGTCGTCGGCGG
CGGCTTGTTTGGCTTTGATATTTCCTCCATGTCCGCTCAGCTGAGCGAGA
ATTCCTATCTATGCTATTTCAACCAGGGCCCTAAGGGTCCTCCCTTCACT
GACGATGAGGACTGTTCTGGTCCCACATCCCTCAACCAGGGTGGCATCAC
GGCAGCCATGGCAGCTGGATCTTGGCTGGGTGCTTTGATTTCAGGTCCGC
TTTCCGATCGCATCGGACGTAAGACGTCCATCATGGTCGGCTGTGTCGTT
TGGTAGGTCAAACTCTGGAGCCCGTGGTGGTGGTTGCTAACCCTGCCGCA
ATGCCTAGGCTGATTGGTTCCACCATTATGTGCGCTTCTCAGAACATCGG
TATGCTCGTTGTTGGGCGGGTCATCAACGGTCTCGCGGTGGGCATTGAGT
CTGCTCAGGTCCCCGTCTACATCAGTGAACTTTCGCCACCCTCCAAGCGC
GGTCGGTTCGTAGGTATGCAGCAATGGGCCATTACATGGGGTATCCTCAT
TATGTTCTAGTAAGTGATCGCGGGTGGGATCTCTAGTGGGACTAAACTAA
TGGAGTCAGTATCTCGTATGGCTGCTCCTTCATCGGGGGACAGAAGTCCT
ACAACTACAGCACTGCTTCTTGGCGAGTCCCCTGGGGCTTGCAGATGCTG
CCGGCTGTTTTCCTTTTCCTTGGAATGCTGGTTCTGCCCGAATCTCCTCG
TTGGCTGGCGCGCAAGGATCGTTGGGAGGACTGCCATCGGGTCTTGGCTC
TCGTCCACGCCAAGGGGGATCTCAACCATCCTTTCGTTGCGCTAGAGTTG
CAGGACATTCGGGATATGTGTGAGCTTGAACGTCAGTTCAAAGATGTCAC
TTACCTTGACCTGTTCAAACCGAGGATGATCAACCGCACGTTGATCGGTC
TGTTCATGCAGATCTGGTCTCAGCTGACCGGCATGAATGTGATGAGTACG
TCTTCGTTTTCCCGTCTAGTCCGTTATTAGGACTGTGCGCTAACGAGATG
TTTACTTTTGACAGTGTACTACATCACGTATCTCTTTTCTATGGCTGGAT
ACACCGGCGATTCCACCCTCCTTGCCTCCTCCATTCAGTATATTATCAAT
GTGTTTATGACCCTCCCGGCACTGATCTGGATGGACAAGTGGGGTCGTCG
CATGCCATTGCTGGTTGGCGCAGCTCTGATGGCCATCTTGATGTATGCCA
ATGGTGCGATCATGGCGGTTCATGGTGTTGTGGTGCCCGGGGGCATCAAT
GGGGTTGCAGCTGAGTCCATGCGTCTTCACGGCGCTCCTGCCAAAGGTTT
GATTGCTTGCACATACCTCTTCGTCGCGTCGTATGCGCCTACCTGGGGTC
CTGTATCCTGGACGTACCCCCCTGAGCTGTATCCGCTGCGGCTGCGTGGT
AAGGGAGTGGCTTTGTCGACCTCAGGTAACTGGGCGTTTAACACTGCATT
GGGGCTGTTTACACCCACTGCATTTGAGAACATCCGCTGGAAGACCTACA
TCATGTTTGGGGTGTTCAACACTGCCATGTTCTTGCACGTGCTGTTCCTG
TTCCCGGAGACTGCAGGAAAGACGCTCGAAGAGACCGAAGCCATGTTCGA
GGATCCCAACGGCATCAAGTACATTGGCACACCGGCCTGGAAGACCAAGA
TGAAGACCCGGCAGGTGGAGCAGCTGGAGCACGGTCAAGTGGATATAGAG
TCCAAGATTGAAACCCGCCACGCAGAGACCACTGAGACCGCTCCCAAATC
CCAGGAGGCCACAGCATAA
back to top

Coding sequence (CDS) from alignment at ch4:6085809..6087627+

>KJC3_006572-T1 ID=KJC3_006572-T1|Name=KJC3_006572-T1|organism=Aspergillus niger KJC3|type=CDS|length=6576bp|location=Sequence derived from alignment at ch4:6085809..6087627+ (Aspergillus niger KJC3)
ATGTTGATTGGCAACATCTACGTGATTGCGAGCGTCGCCGTCGTCGGCGG
CGGCTTGTTTGGCTTTGATATTTCCTCCATGTCCGCTCAGCTGAGCGAGA
ATTCCTATCTATGCTATTTCAACCAGGGCCCTAAGGGTCCTCCCTTCACT
GACGATGAGGACTGTTCTGGTCCCACATCCCTCAACCAGGGTGGCATCAC
GGCAGCCATGGCAGCTGGATCTTGGCTGGGTGCTTTGATTTCAGGTCCGC
TTTCCGATCGCATCGGACGTAAGACGTCCATCATGGTCGGCTGTGTCGTT
TGGCTGATTGGTTCCACCATTATGTGCGCTTCTCAGAACATCGGTATGCT
CGTTGTTGGGCGGGTCATCAACGGTCTCGCGGTGGGCATTGAGTCTGCTC
AGGTCCCCGTCTACATCAGTGAACTTTCGCCACCCTCCAAGCGCGGTCGG
TTCGTAGGTATGCAGCAATGGGCCATTACATGGGGTATCCTCATTATGTT
CTATATCTCGTATGGCTGCTCCTTCATCGGGGGACAGAAGTCCTACAACT
ACAGCACTGCTTCTTGGCGAGTCCCCTGGGGCTTGCAGATGCTGCCGGCT
GTTTTCCTTTTCCTTGGAATGCTGGTTCTGCCCGAATCTCCTCGTTGGCT
GGCGCGCAAGGATCGTTGGGAGGACTGCCATCGGGTCTTGGCTCTCGTCC
ACGCCAAGGGGGATCTCAACCATCCTTTCGTTGCGCTAGAGTTGCAGGAC
ATTCGGGATATGTGTGAGCTTGAACGTCAGTTCAAAGATGTCACTTACCT
TGACCTGTTCAAACCGAGGATGATCAACCGCACGTTGATCGGTCTGTTCA
TGCAGATCTGGTCTCAGCTGACCGGCATGAATGTGATGATGTACTACATC
ACGTATCTCTTTTCTATGGCTGGATACACCGGCGATTCCACCCTCCTTGC
CTCCTCCATTCAGTATATTATCAATGTGTTTATGACCCTCCCGGCACTGA
TCTGGATGGACAAGTGGGGTCGTCGCATGCCATTGCTGGTTGGCGCAGCT
CTGATGGCCATCTTGATGTATGCCAATGGTGCGATCATGGCGGTTCATGG
TGTTGTGGTGCCCGGGGGCATCAATGGGGTTGCAGCTGAGTCCATGCGTC
TTCACGGCGCTCCTGCCAAAGGTTTGATTGCTTGCACATACCTCTTCGTC
GCGTCGTATGCGCCTACCTGGGGTCCTGTATCCTGGACGTACCCCCCTGA
GCTGTATCCGCTGCGGCTGCGTGGTAAGGGAGTGGCTTTGTCGACCTCAG
GTAACTGGGCGTTTAACACTGCATTGGGGCTGTTTACACCCACTGCATTT
GAGAACATCCGCTGGAAGACCTACATCATGTTTGGGGTGTTCAACACTGC
CATGTTCTTGCACGTGCTGTTCCTGTTCCCGGAGACTGCAGGAAAGACGC
TCGAAGAGACCGAAGCCATGTTCGAGGATCCCAACGGCATCAAGTACATT
GGCACACCGGCCTGGAAGACCAAGATGAAGACCCGGCAGGTGGAGCAGCT
GGAGCACGGTCAAGTGGATATAGAGTCCAAGATTGAAACCCGCCACGCAG
AGACCACTGAGACCGCTCCCAAATCCCAGGAGGCCACAGCATAAATGTTG
ATTGGCAACATCTACGTGATTGCGAGCGTCGCCGTCGTCGGCGGCGGCTT
GTTTGGCTTTGATATTTCCTCCATGTCCGCTCAGCTGAGCGAGAATTCCT
ATCTATGCTATTTCAACCAGGGCCCTAAGGGTCCTCCCTTCACTGACGAT
GAGGACTGTTCTGGTCCCACATCCCTCAACCAGGGTGGCATCACGGCAGC
CATGGCAGCTGGATCTTGGCTGGGTGCTTTGATTTCAGGTCCGCTTTCCG
ATCGCATCGGACGTAAGACGTCCATCATGGTCGGCTGTGTCGTTTGGCTG
ATTGGTTCCACCATTATGTGCGCTTCTCAGAACATCGGTATGCTCGTTGT
TGGGCGGGTCATCAACGGTCTCGCGGTGGGCATTGAGTCTGCTCAGGTCC
CCGTCTACATCAGTGAACTTTCGCCACCCTCCAAGCGCGGTCGGTTCGTA
GGTATGCAGCAATGGGCCATTACATGGGGTATCCTCATTATGTTCTATAT
CTCGTATGGCTGCTCCTTCATCGGGGGACAGAAGTCCTACAACTACAGCA
CTGCTTCTTGGCGAGTCCCCTGGGGCTTGCAGATGCTGCCGGCTGTTTTC
CTTTTCCTTGGAATGCTGGTTCTGCCCGAATCTCCTCGTTGGCTGGCGCG
CAAGGATCGTTGGGAGGACTGCCATCGGGTCTTGGCTCTCGTCCACGCCA
AGGGGGATCTCAACCATCCTTTCGTTGCGCTAGAGTTGCAGGACATTCGG
GATATGTGTGAGCTTGAACGTCAGTTCAAAGATGTCACTTACCTTGACCT
GTTCAAACCGAGGATGATCAACCGCACGTTGATCGGTCTGTTCATGCAGA
TCTGGTCTCAGCTGACCGGCATGAATGTGATGATGTACTACATCACGTAT
CTCTTTTCTATGGCTGGATACACCGGCGATTCCACCCTCCTTGCCTCCTC
CATTCAGTATATTATCAATGTGTTTATGACCCTCCCGGCACTGATCTGGA
TGGACAAGTGGGGTCGTCGCATGCCATTGCTGGTTGGCGCAGCTCTGATG
GCCATCTTGATGTATGCCAATGGTGCGATCATGGCGGTTCATGGTGTTGT
GGTGCCCGGGGGCATCAATGGGGTTGCAGCTGAGTCCATGCGTCTTCACG
GCGCTCCTGCCAAAGGTTTGATTGCTTGCACATACCTCTTCGTCGCGTCG
TATGCGCCTACCTGGGGTCCTGTATCCTGGACGTACCCCCCTGAGCTGTA
TCCGCTGCGGCTGCGTGGTAAGGGAGTGGCTTTGTCGACCTCAGGTAACT
GGGCGTTTAACACTGCATTGGGGCTGTTTACACCCACTGCATTTGAGAAC
ATCCGCTGGAAGACCTACATCATGTTTGGGGTGTTCAACACTGCCATGTT
CTTGCACGTGCTGTTCCTGTTCCCGGAGACTGCAGGAAAGACGCTCGAAG
AGACCGAAGCCATGTTCGAGGATCCCAACGGCATCAAGTACATTGGCACA
CCGGCCTGGAAGACCAAGATGAAGACCCGGCAGGTGGAGCAGCTGGAGCA
CGGTCAAGTGGATATAGAGTCCAAGATTGAAACCCGCCACGCAGAGACCA
CTGAGACCGCTCCCAAATCCCAGGAGGCCACAGCATAAATGTTGATTGGC
AACATCTACGTGATTGCGAGCGTCGCCGTCGTCGGCGGCGGCTTGTTTGG
CTTTGATATTTCCTCCATGTCCGCTCAGCTGAGCGAGAATTCCTATCTAT
GCTATTTCAACCAGGGCCCTAAGGGTCCTCCCTTCACTGACGATGAGGAC
TGTTCTGGTCCCACATCCCTCAACCAGGGTGGCATCACGGCAGCCATGGC
AGCTGGATCTTGGCTGGGTGCTTTGATTTCAGGTCCGCTTTCCGATCGCA
TCGGACGTAAGACGTCCATCATGGTCGGCTGTGTCGTTTGGCTGATTGGT
TCCACCATTATGTGCGCTTCTCAGAACATCGGTATGCTCGTTGTTGGGCG
GGTCATCAACGGTCTCGCGGTGGGCATTGAGTCTGCTCAGGTCCCCGTCT
ACATCAGTGAACTTTCGCCACCCTCCAAGCGCGGTCGGTTCGTAGGTATG
CAGCAATGGGCCATTACATGGGGTATCCTCATTATGTTCTATATCTCGTA
TGGCTGCTCCTTCATCGGGGGACAGAAGTCCTACAACTACAGCACTGCTT
CTTGGCGAGTCCCCTGGGGCTTGCAGATGCTGCCGGCTGTTTTCCTTTTC
CTTGGAATGCTGGTTCTGCCCGAATCTCCTCGTTGGCTGGCGCGCAAGGA
TCGTTGGGAGGACTGCCATCGGGTCTTGGCTCTCGTCCACGCCAAGGGGG
ATCTCAACCATCCTTTCGTTGCGCTAGAGTTGCAGGACATTCGGGATATG
TGTGAGCTTGAACGTCAGTTCAAAGATGTCACTTACCTTGACCTGTTCAA
ACCGAGGATGATCAACCGCACGTTGATCGGTCTGTTCATGCAGATCTGGT
CTCAGCTGACCGGCATGAATGTGATGATGTACTACATCACGTATCTCTTT
TCTATGGCTGGATACACCGGCGATTCCACCCTCCTTGCCTCCTCCATTCA
GTATATTATCAATGTGTTTATGACCCTCCCGGCACTGATCTGGATGGACA
AGTGGGGTCGTCGCATGCCATTGCTGGTTGGCGCAGCTCTGATGGCCATC
TTGATGTATGCCAATGGTGCGATCATGGCGGTTCATGGTGTTGTGGTGCC
CGGGGGCATCAATGGGGTTGCAGCTGAGTCCATGCGTCTTCACGGCGCTC
CTGCCAAAGGTTTGATTGCTTGCACATACCTCTTCGTCGCGTCGTATGCG
CCTACCTGGGGTCCTGTATCCTGGACGTACCCCCCTGAGCTGTATCCGCT
GCGGCTGCGTGGTAAGGGAGTGGCTTTGTCGACCTCAGGTAACTGGGCGT
TTAACACTGCATTGGGGCTGTTTACACCCACTGCATTTGAGAACATCCGC
TGGAAGACCTACATCATGTTTGGGGTGTTCAACACTGCCATGTTCTTGCA
CGTGCTGTTCCTGTTCCCGGAGACTGCAGGAAAGACGCTCGAAGAGACCG
AAGCCATGTTCGAGGATCCCAACGGCATCAAGTACATTGGCACACCGGCC
TGGAAGACCAAGATGAAGACCCGGCAGGTGGAGCAGCTGGAGCACGGTCA
AGTGGATATAGAGTCCAAGATTGAAACCCGCCACGCAGAGACCACTGAGA
CCGCTCCCAAATCCCAGGAGGCCACAGCATAAATGTTGATTGGCAACATC
TACGTGATTGCGAGCGTCGCCGTCGTCGGCGGCGGCTTGTTTGGCTTTGA
TATTTCCTCCATGTCCGCTCAGCTGAGCGAGAATTCCTATCTATGCTATT
TCAACCAGGGCCCTAAGGGTCCTCCCTTCACTGACGATGAGGACTGTTCT
GGTCCCACATCCCTCAACCAGGGTGGCATCACGGCAGCCATGGCAGCTGG
ATCTTGGCTGGGTGCTTTGATTTCAGGTCCGCTTTCCGATCGCATCGGAC
GTAAGACGTCCATCATGGTCGGCTGTGTCGTTTGGCTGATTGGTTCCACC
ATTATGTGCGCTTCTCAGAACATCGGTATGCTCGTTGTTGGGCGGGTCAT
CAACGGTCTCGCGGTGGGCATTGAGTCTGCTCAGGTCCCCGTCTACATCA
GTGAACTTTCGCCACCCTCCAAGCGCGGTCGGTTCGTAGGTATGCAGCAA
TGGGCCATTACATGGGGTATCCTCATTATGTTCTATATCTCGTATGGCTG
CTCCTTCATCGGGGGACAGAAGTCCTACAACTACAGCACTGCTTCTTGGC
GAGTCCCCTGGGGCTTGCAGATGCTGCCGGCTGTTTTCCTTTTCCTTGGA
ATGCTGGTTCTGCCCGAATCTCCTCGTTGGCTGGCGCGCAAGGATCGTTG
GGAGGACTGCCATCGGGTCTTGGCTCTCGTCCACGCCAAGGGGGATCTCA
ACCATCCTTTCGTTGCGCTAGAGTTGCAGGACATTCGGGATATGTGTGAG
CTTGAACGTCAGTTCAAAGATGTCACTTACCTTGACCTGTTCAAACCGAG
GATGATCAACCGCACGTTGATCGGTCTGTTCATGCAGATCTGGTCTCAGC
TGACCGGCATGAATGTGATGATGTACTACATCACGTATCTCTTTTCTATG
GCTGGATACACCGGCGATTCCACCCTCCTTGCCTCCTCCATTCAGTATAT
TATCAATGTGTTTATGACCCTCCCGGCACTGATCTGGATGGACAAGTGGG
GTCGTCGCATGCCATTGCTGGTTGGCGCAGCTCTGATGGCCATCTTGATG
TATGCCAATGGTGCGATCATGGCGGTTCATGGTGTTGTGGTGCCCGGGGG
CATCAATGGGGTTGCAGCTGAGTCCATGCGTCTTCACGGCGCTCCTGCCA
AAGGTTTGATTGCTTGCACATACCTCTTCGTCGCGTCGTATGCGCCTACC
TGGGGTCCTGTATCCTGGACGTACCCCCCTGAGCTGTATCCGCTGCGGCT
GCGTGGTAAGGGAGTGGCTTTGTCGACCTCAGGTAACTGGGCGTTTAACA
CTGCATTGGGGCTGTTTACACCCACTGCATTTGAGAACATCCGCTGGAAG
ACCTACATCATGTTTGGGGTGTTCAACACTGCCATGTTCTTGCACGTGCT
GTTCCTGTTCCCGGAGACTGCAGGAAAGACGCTCGAAGAGACCGAAGCCA
TGTTCGAGGATCCCAACGGCATCAAGTACATTGGCACACCGGCCTGGAAG
ACCAAGATGAAGACCCGGCAGGTGGAGCAGCTGGAGCACGGTCAAGTGGA
TATAGAGTCCAAGATTGAAACCCGCCACGCAGAGACCACTGAGACCGCTC
CCAAATCCCAGGAGGCCACAGCATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006572KJC3_006572Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006572-T1.exon1KJC3_006572-T1.exon1Aspergillus niger KJC3exon
KJC3_006572-T1.exon2KJC3_006572-T1.exon2Aspergillus niger KJC3exon
KJC3_006572-T1.exon3KJC3_006572-T1.exon3Aspergillus niger KJC3exon
KJC3_006572-T1.exon4KJC3_006572-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006572-T1.cdsKJC3_006572-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006572-T1KJC3_006572-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:6085809..6087627 +
Powered by Drupal