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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:6094716..6097017+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006577-T1 ID=KJC3_006577-T1|Name=KJC3_006577-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2302bp|location=Sequence derived from alignment at ch4:6094716..6097017+ (Aspergillus niger KJC3)
ATGAGCTCCATCCGTCGACGCCTGGCCTGTGTGGAGTGCACCCGGCGCAA
AATACGCTGTGACAAGGTTGTCCCATGTCGCAATTGCACCAGGAGGTAAG
CTTCCCTCAATTTGTTCCTGACATCGGCTAACTCCGACAGAGGCATTACC
TGCTCTCGCGCCAGAGGTACCGATGATGAGGTGGACCGATTACAGGCCCG
TGTTCAGGAGCTTGAAGCTGCTCTGAAGGAGGCCACTGATCCACAATCTC
AACCTAGTCCTCTACCCAAATCTGAGATTATCCACAATGCCAGCAATACC
CCTGTCTCCGAGACGGTGGAGACCCCCGAACGTGAGATGGCGGACGCCGC
CACCATCCTTGAGTTCCTTGCCTGGGGCCGACGGAAGAACCCGGACTATC
ACGATATGCTAGCTCGCAGAGATGGTGTCGAGCATCATTCCCCTGGCGAC
GTGACGGCCGAAGGAAGCGGCGATGAGCGGAACCCCGAGGTTGCCTCCGC
ACTAGCCTATCTCCAGCTCCTCCTCCCAGATCGCGAGCTCATGCAGCAGC
TTGTCTCCTACCATTGCGACTGCGTGCTTTGGTATCACGGCTCTTTTCAC
TCTGTCCGTTTTCAAGAAGAACTGGACGATTTCTTCCGGCTCGCCAATGG
TCACATCGCCCATCCCCGCGTCGACCTGCAATGGGTCGCGCTTCTCTTCT
CTGTCCTTACCGGCGCCCTCGCCTGCGCTCCTCGCATGACTGCTCAGGCA
TGGGGCTTTTCTGAATGGGAGCAGACCACTCTAGCACAGAGGTGGTTCAA
AGCTGTCTCGACCTGTCTACACCATGCCGACTTTACTGCGGTCCACTCGC
TCTACGCCGTCCAGGCCATTGCCACTCTTACCATGTCTGCTCATCTCCTC
GGCTTCTCTAACAGCCTCTCCGTGCTACTTGCAGCCGCTACCCGCATCGC
CCAAGGGCTGGGCCTACACCGTCTCGGCTCGGAAAGAGAAACGGCACCCA
CTCCTGTCATGATTGACCGCGAAATCGGCCGTCGTGCATGGTGCCAACTC
TGCATCCAGGACTGGTTCTCCATTCCCTTCTCCGAAAGCTACCTCATCCC
GCGATCTTGCTTGAACACTGCACGTCCCCGGAACTGTCGCGACGAAGATA
TGCTGAAGCTGCCTGATGATGAACCAAGTGTCGCGGGCTACTCCAGGTTC
TTTTACCAGGTTGCCGCTCTTATGCCTTCATTGCAAGACAGCATGGCTGC
GTCGAATACGTTGTATACACGTTACGAACAGGTTCTGGAACATGACCGTC
GATTGCGCAGTTTAGCTACCCAGGGTCTCCCACTTTACTTGAGGAATGTT
CCTGTCGAAGAGCATCCGGAGTGGCCGAAATATGTCCTCTGGGCGAGACG
TAGCTTGGCGATCAGCTCGTCGCATAAAATCATCATGATACATCGGAAGT
TCCTCGAGCTAAGCTTCACAAATCCTGTATTTGCCAGGACACGTCGCACG
TGCGTTGCCGCCGCCCGGACAATCATCAAAGAGCAGAAAGAGGCGATCCA
TGACGGCGGACCGGTGCTTTGGATTCACCAGGCCTTTAGTGTTGCTGCTA
GCGTACGCTTCCACTTACTACCCCGAAGTAACTTCATCATTGGCTAATAA
AATAACAGATAATATTATGTCTTGACCTCTTCCACCGCACCACCTCCGAC
CCGGAAACAACCTACCACCGCCAACTCATCAACGACGGTCTGGAGATCCT
TTCGCACAGCGAATCAAACATGATCGCCCGACGCGGAGTGCATCTGCTCG
AGGCATTGCTAGCGAAAGAGCGCGACCGTAGTAGTCCGAAACATTTACCC
TCACCGGAGCAGGATGCAGATCGGGACTTGGATCTGGTGGGAGTGATTCG
AAGTTTCTGCGAGAAGGGCCGCTGGCAGAGGAGTCGAACGGCTTCGCGGG
ATGGGAGCCAGGGATGGCCGCCTGTGGATCGGGGGTCGACTGAGAGAACT
GGACAGGTGCAGACGCCGGTTGGAGTCACGTCGCCGACATTGGAGAGGTT
GTCCATGTCGTATGGGTTGGAATGTGCGGAGAGCTTAGAGGATATTTTGG
TCTTGGCGGCGAATTATGCGGCTTGATGATGTTGGGGATAGGAGGGTAGG
GACTGTGATGTCTTCGGTCCCTGCTTACAAAACTTGAGGATATGTCTGCA
TTTATGCTTTGCTAGGCAAGTGAGCGTTACGATATAGATTGTGGATACGT
TACATATTGTACATAGATTGTGAATGCTCAGAATGAAGATAGTTTATCGG
GA back to topCoding sequence (CDS) from alignment at ch4:6094716..6097017+ >KJC3_006577-T1 ID=KJC3_006577-T1|Name=KJC3_006577-T1|organism=Aspergillus niger KJC3|type=CDS|length=6075bp|location=Sequence derived from alignment at ch4:6094716..6097017+ (Aspergillus niger KJC3)
ATGAGCTCCATCCGTCGACGCCTGGCCTGTGTGGAGTGCACCCGGCGCAA
AATACGCTGTGACAAGGTTGTCCCATGTCGCAATTGCACCAGGAGAGGCA
TTACCTGCTCTCGCGCCAGAGGTACCGATGATGAGGTGGACCGATTACAG
GCCCGTGTTCAGGAGCTTGAAGCTGCTCTGAAGGAGGCCACTGATCCACA
ATCTCAACCTAGTCCTCTACCCAAATCTGAGATTATCCACAATGCCAGCA
ATACCCCTGTCTCCGAGACGGTGGAGACCCCCGAACGTGAGATGGCGGAC
GCCGCCACCATCCTTGAGTTCCTTGCCTGGGGCCGACGGAAGAACCCGGA
CTATCACGATATGCTAGCTCGCAGAGATGGTGTCGAGCATCATTCCCCTG
GCGACGTGACGGCCGAAGGAAGCGGCGATGAGCGGAACCCCGAGGTTGCC
TCCGCACTAGCCTATCTCCAGCTCCTCCTCCCAGATCGCGAGCTCATGCA
GCAGCTTGTCTCCTACCATTGCGACTGCGTGCTTTGGTATCACGGCTCTT
TTCACTCTGTCCGTTTTCAAGAAGAACTGGACGATTTCTTCCGGCTCGCC
AATGGTCACATCGCCCATCCCCGCGTCGACCTGCAATGGGTCGCGCTTCT
CTTCTCTGTCCTTACCGGCGCCCTCGCCTGCGCTCCTCGCATGACTGCTC
AGGCATGGGGCTTTTCTGAATGGGAGCAGACCACTCTAGCACAGAGGTGG
TTCAAAGCTGTCTCGACCTGTCTACACCATGCCGACTTTACTGCGGTCCA
CTCGCTCTACGCCGTCCAGGCCATTGCCACTCTTACCATGTCTGCTCATC
TCCTCGGCTTCTCTAACAGCCTCTCCGTGCTACTTGCAGCCGCTACCCGC
ATCGCCCAAGGGCTGGGCCTACACCGTCTCGGCTCGGAAAGAGAAACGGC
ACCCACTCCTGTCATGATTGACCGCGAAATCGGCCGTCGTGCATGGTGCC
AACTCTGCATCCAGGACTGGTTCTCCATTCCCTTCTCCGAAAGCTACCTC
ATCCCGCGATCTTGCTTGAACACTGCACGTCCCCGGAACTGTCGCGACGA
AGATATGCTGAAGCTGCCTGATGATGAACCAAGTGTCGCGGGCTACTCCA
GGTTCTTTTACCAGGTTGCCGCTCTTATGCCTTCATTGCAAGACAGCATG
GCTGCGTCGAATACGTTGTATACACGTTACGAACAGGTTCTGGAACATGA
CCGTCGATTGCGCAGTTTAGCTACCCAGGGTCTCCCACTTTACTTGAGGA
ATGTTCCTGTCGAAGAGCATCCGGAGTGGCCGAAATATGTCCTCTGGGCG
AGACGTAGCTTGGCGATCAGCTCGTCGCATAAAATCATCATGATACATCG
GAAGTTCCTCGAGCTAAGCTTCACAAATCCTGTATTTGCCAGGACACGTC
GCACGTGCGTTGCCGCCGCCCGGACAATCATCAAAGAGCAGAAAGAGGCG
ATCCATGACGGCGGACCGGTGCTTTGGATTCACCAGGCCTTTAGTGTTGC
TGCTAGCATAATATTATGTCTTGACCTCTTCCACCGCACCACCTCCGACC
CGGAAACAACCTACCACCGCCAACTCATCAACGACGGTCTGGAGATCCTT
TCGCACAGCGAATCAAACATGATCGCCCGACGCGGAGTGCATCTGCTCGA
GGCATTGCTAGCGAAAGAGCGCGACCGTAGTAGTCCGAAACATTTACCCT
CACCGGAGCAGGATGCAGATCGGGACTTGGATCTGGTGGGAGTGATTCGA
AGTTTCTGCGAGAAGGGCCGCTGGCAGAGGAGTCGAACGGCTTCGCGGGA
TGGGAGCCAGGGATGGCCGCCTGTGGATCGGGGGTCGACTGAGAGAACTG
GACAGGTGCAGACGCCGGTTGGAGTCACGTCGCCGACATTGGAGAGGTTG
TCCATGTCGTATGGGTTGGAATGTGCGGAGAGCTTAGAGGATATTTTGGT
CTTGGCGGCGAATTATGCGGCTTGAATGAGCTCCATCCGTCGACGCCTGG
CCTGTGTGGAGTGCACCCGGCGCAAAATACGCTGTGACAAGGTTGTCCCA
TGTCGCAATTGCACCAGGAGAGGCATTACCTGCTCTCGCGCCAGAGGTAC
CGATGATGAGGTGGACCGATTACAGGCCCGTGTTCAGGAGCTTGAAGCTG
CTCTGAAGGAGGCCACTGATCCACAATCTCAACCTAGTCCTCTACCCAAA
TCTGAGATTATCCACAATGCCAGCAATACCCCTGTCTCCGAGACGGTGGA
GACCCCCGAACGTGAGATGGCGGACGCCGCCACCATCCTTGAGTTCCTTG
CCTGGGGCCGACGGAAGAACCCGGACTATCACGATATGCTAGCTCGCAGA
GATGGTGTCGAGCATCATTCCCCTGGCGACGTGACGGCCGAAGGAAGCGG
CGATGAGCGGAACCCCGAGGTTGCCTCCGCACTAGCCTATCTCCAGCTCC
TCCTCCCAGATCGCGAGCTCATGCAGCAGCTTGTCTCCTACCATTGCGAC
TGCGTGCTTTGGTATCACGGCTCTTTTCACTCTGTCCGTTTTCAAGAAGA
ACTGGACGATTTCTTCCGGCTCGCCAATGGTCACATCGCCCATCCCCGCG
TCGACCTGCAATGGGTCGCGCTTCTCTTCTCTGTCCTTACCGGCGCCCTC
GCCTGCGCTCCTCGCATGACTGCTCAGGCATGGGGCTTTTCTGAATGGGA
GCAGACCACTCTAGCACAGAGGTGGTTCAAAGCTGTCTCGACCTGTCTAC
ACCATGCCGACTTTACTGCGGTCCACTCGCTCTACGCCGTCCAGGCCATT
GCCACTCTTACCATGTCTGCTCATCTCCTCGGCTTCTCTAACAGCCTCTC
CGTGCTACTTGCAGCCGCTACCCGCATCGCCCAAGGGCTGGGCCTACACC
GTCTCGGCTCGGAAAGAGAAACGGCACCCACTCCTGTCATGATTGACCGC
GAAATCGGCCGTCGTGCATGGTGCCAACTCTGCATCCAGGACTGGTTCTC
CATTCCCTTCTCCGAAAGCTACCTCATCCCGCGATCTTGCTTGAACACTG
CACGTCCCCGGAACTGTCGCGACGAAGATATGCTGAAGCTGCCTGATGAT
GAACCAAGTGTCGCGGGCTACTCCAGGTTCTTTTACCAGGTTGCCGCTCT
TATGCCTTCATTGCAAGACAGCATGGCTGCGTCGAATACGTTGTATACAC
GTTACGAACAGGTTCTGGAACATGACCGTCGATTGCGCAGTTTAGCTACC
CAGGGTCTCCCACTTTACTTGAGGAATGTTCCTGTCGAAGAGCATCCGGA
GTGGCCGAAATATGTCCTCTGGGCGAGACGTAGCTTGGCGATCAGCTCGT
CGCATAAAATCATCATGATACATCGGAAGTTCCTCGAGCTAAGCTTCACA
AATCCTGTATTTGCCAGGACACGTCGCACGTGCGTTGCCGCCGCCCGGAC
AATCATCAAAGAGCAGAAAGAGGCGATCCATGACGGCGGACCGGTGCTTT
GGATTCACCAGGCCTTTAGTGTTGCTGCTAGCATAATATTATGTCTTGAC
CTCTTCCACCGCACCACCTCCGACCCGGAAACAACCTACCACCGCCAACT
CATCAACGACGGTCTGGAGATCCTTTCGCACAGCGAATCAAACATGATCG
CCCGACGCGGAGTGCATCTGCTCGAGGCATTGCTAGCGAAAGAGCGCGAC
CGTAGTAGTCCGAAACATTTACCCTCACCGGAGCAGGATGCAGATCGGGA
CTTGGATCTGGTGGGAGTGATTCGAAGTTTCTGCGAGAAGGGCCGCTGGC
AGAGGAGTCGAACGGCTTCGCGGGATGGGAGCCAGGGATGGCCGCCTGTG
GATCGGGGGTCGACTGAGAGAACTGGACAGGTGCAGACGCCGGTTGGAGT
CACGTCGCCGACATTGGAGAGGTTGTCCATGTCGTATGGGTTGGAATGTG
CGGAGAGCTTAGAGGATATTTTGGTCTTGGCGGCGAATTATGCGGCTTGA
ATGAGCTCCATCCGTCGACGCCTGGCCTGTGTGGAGTGCACCCGGCGCAA
AATACGCTGTGACAAGGTTGTCCCATGTCGCAATTGCACCAGGAGAGGCA
TTACCTGCTCTCGCGCCAGAGGTACCGATGATGAGGTGGACCGATTACAG
GCCCGTGTTCAGGAGCTTGAAGCTGCTCTGAAGGAGGCCACTGATCCACA
ATCTCAACCTAGTCCTCTACCCAAATCTGAGATTATCCACAATGCCAGCA
ATACCCCTGTCTCCGAGACGGTGGAGACCCCCGAACGTGAGATGGCGGAC
GCCGCCACCATCCTTGAGTTCCTTGCCTGGGGCCGACGGAAGAACCCGGA
CTATCACGATATGCTAGCTCGCAGAGATGGTGTCGAGCATCATTCCCCTG
GCGACGTGACGGCCGAAGGAAGCGGCGATGAGCGGAACCCCGAGGTTGCC
TCCGCACTAGCCTATCTCCAGCTCCTCCTCCCAGATCGCGAGCTCATGCA
GCAGCTTGTCTCCTACCATTGCGACTGCGTGCTTTGGTATCACGGCTCTT
TTCACTCTGTCCGTTTTCAAGAAGAACTGGACGATTTCTTCCGGCTCGCC
AATGGTCACATCGCCCATCCCCGCGTCGACCTGCAATGGGTCGCGCTTCT
CTTCTCTGTCCTTACCGGCGCCCTCGCCTGCGCTCCTCGCATGACTGCTC
AGGCATGGGGCTTTTCTGAATGGGAGCAGACCACTCTAGCACAGAGGTGG
TTCAAAGCTGTCTCGACCTGTCTACACCATGCCGACTTTACTGCGGTCCA
CTCGCTCTACGCCGTCCAGGCCATTGCCACTCTTACCATGTCTGCTCATC
TCCTCGGCTTCTCTAACAGCCTCTCCGTGCTACTTGCAGCCGCTACCCGC
ATCGCCCAAGGGCTGGGCCTACACCGTCTCGGCTCGGAAAGAGAAACGGC
ACCCACTCCTGTCATGATTGACCGCGAAATCGGCCGTCGTGCATGGTGCC
AACTCTGCATCCAGGACTGGTTCTCCATTCCCTTCTCCGAAAGCTACCTC
ATCCCGCGATCTTGCTTGAACACTGCACGTCCCCGGAACTGTCGCGACGA
AGATATGCTGAAGCTGCCTGATGATGAACCAAGTGTCGCGGGCTACTCCA
GGTTCTTTTACCAGGTTGCCGCTCTTATGCCTTCATTGCAAGACAGCATG
GCTGCGTCGAATACGTTGTATACACGTTACGAACAGGTTCTGGAACATGA
CCGTCGATTGCGCAGTTTAGCTACCCAGGGTCTCCCACTTTACTTGAGGA
ATGTTCCTGTCGAAGAGCATCCGGAGTGGCCGAAATATGTCCTCTGGGCG
AGACGTAGCTTGGCGATCAGCTCGTCGCATAAAATCATCATGATACATCG
GAAGTTCCTCGAGCTAAGCTTCACAAATCCTGTATTTGCCAGGACACGTC
GCACGTGCGTTGCCGCCGCCCGGACAATCATCAAAGAGCAGAAAGAGGCG
ATCCATGACGGCGGACCGGTGCTTTGGATTCACCAGGCCTTTAGTGTTGC
TGCTAGCATAATATTATGTCTTGACCTCTTCCACCGCACCACCTCCGACC
CGGAAACAACCTACCACCGCCAACTCATCAACGACGGTCTGGAGATCCTT
TCGCACAGCGAATCAAACATGATCGCCCGACGCGGAGTGCATCTGCTCGA
GGCATTGCTAGCGAAAGAGCGCGACCGTAGTAGTCCGAAACATTTACCCT
CACCGGAGCAGGATGCAGATCGGGACTTGGATCTGGTGGGAGTGATTCGA
AGTTTCTGCGAGAAGGGCCGCTGGCAGAGGAGTCGAACGGCTTCGCGGGA
TGGGAGCCAGGGATGGCCGCCTGTGGATCGGGGGTCGACTGAGAGAACTG
GACAGGTGCAGACGCCGGTTGGAGTCACGTCGCCGACATTGGAGAGGTTG
TCCATGTCGTATGGGTTGGAATGTGCGGAGAGCTTAGAGGATATTTTGGT
CTTGGCGGCGAATTATGCGGCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006577-T1.utr3p1 | KJC3_006577-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:6094716..6097017 + |
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