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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:6097078..6098395- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006578-T1 ID=KJC3_006578-T1|Name=KJC3_006578-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1318bp|location=Sequence derived from alignment at ch4:6097078..6098395- (Aspergillus niger KJC3)
ATGAGTACAACAACAACTTCAATCGCCTCTGCCACCAGTGCTTTGGCCTC
TTCAACCCAAACATGCACCAACCCCAAACCAGGGAAGAATGGCTACCTGC
CTCCAGAAGCGTGTGACAGTATCCTGCTCTATGTTCCCTCTCTAACTGCC
GCAGTATTGTTCTGCGTGCTATACGGCCTAACCCTCATCTGCCACGGGGT
ACAAGCATATCTCTACAAGAAGGTACGTACAAGAAGCCTCTCATACAGAC
GCTTAATCCCAAGCGACTAACAACCACCTCCAGCGCTACGCCTGGGTCAT
CATGATGGGCGCAACCTGGGAACTACTCGCCTTTATATTCCGTGCTCTCC
TTACACGACAACAGAACAACTCGAATTGGGACACCGTCTACACGATCATG
TTCCTCCTTGCTCCGCTCTGTCCGTCCCCCTCTCTCCCCTCTCTCCTCTC
CCTACCCCACTAACCAACCTCACAGGGATAAACGCCTTCCTCTACATGAC
CCTCGGCCGACTCATCTACTTCTTCACTCCGGACCAACAACTCGCCGGCA
TCACCGCCCGACGCTACGGCCGACTCTTCGTCTGGCTCGACATCTTCGCC
TTCCTCGTCCAGCTCGGCGGCGCAGCCATCACCACCGAGACGGGTGTACC
GACCAGCAGAATCATGCTAGGCGTACATATATACATGGGTGGAATTGGAT
TGCAGGAGTTATTCGTCCTGATCTTCACTGGATTGGTCATCCATCTCCAT
CGGAAACTCATCCACTATGAACAGGCGGGGATTTTGAGTCCAGGCGGTGT
GGTAGGCATGAGCATGAGCAGACATAAGCCCCTCCCGTGGCGGTGGCTAT
TCTATGTGATGTATTCTGCGCTGGGGATGATTACCGTACGTCTTCCCTTT
ATCCTTTTACTCTTTCTCAGAGAATTTTACTAATGATCGGACGGTACAGA
TACGTATCATCTTCCGACTGTGCCAATACGCACAAGGCACGGATCCGAAT
AACCCCGTCCTGACGCATGAAGCATACGAATATGTCTTTGATGCGGTGCC
GATGTTCATTGCGCTGGCGTTGTTGAATGTGGTGCATCCGGGGCGGGTGT
TGCAGGGCCCGGAGTCGGAGTTTCCGAGGGTGAGTCGGGCGGAGAAGAAG
AGGCTGAAGAGGGAGAAGAAACAGTTGAAGAGGGAGAGGAAGGAGGCGAA
GAGAATGGAGAAGGAGATGAGGAAGGGAGGGAAGGGTGGGTGGTGGTGGA
AACGGGGGAGGGAGAGTGAGGCGTTTGAGATTATTCCGATGCAGGAGGAG
GTAGAGGGGAGGGTGTAG back to topCoding sequence (CDS) from alignment at ch4:6097078..6098395- >KJC3_006578-T1 ID=KJC3_006578-T1|Name=KJC3_006578-T1|organism=Aspergillus niger KJC3|type=CDS|length=4548bp|location=Sequence derived from alignment at ch4:6097078..6098395- (Aspergillus niger KJC3)
ATACGTATCATCTTCCGACTGTGCCAATACGCACAAGGCACGGATCCGAA
TAACCCCGTCCTGACGCATGAAGCATACGAATATGTCTTTGATGCGGTGC
CGATGTTCATTGCGCTGGCGTTGTTGAATGTGGTGCATCCGGGGCGGGTG
TTGCAGGGCCCGGAGTCGGAGTTTCCGAGGGTGAGTCGGGCGGAGAAGAA
GAGGCTGAAGAGGGAGAAGAAACAGTTGAAGAGGGAGAGGAAGGAGGCGA
AGAGAATGGAGAAGGAGATGAGGAAGGGAGGGAAGGGTGGGTGGTGGTGG
AAACGGGGGAGGGAGAGTGAGGCGTTTGAGATTATTCCGATGCAGGAGGA
GGTAGAGGGGAGGGTGTAGGGATAAACGCCTTCCTCTACATGACCCTCGG
CCGACTCATCTACTTCTTCACTCCGGACCAACAACTCGCCGGCATCACCG
CCCGACGCTACGGCCGACTCTTCGTCTGGCTCGACATCTTCGCCTTCCTC
GTCCAGCTCGGCGGCGCAGCCATCACCACCGAGACGGGTGTACCGACCAG
CAGAATCATGCTAGGCGTACATATATACATGGGTGGAATTGGATTGCAGG
AGTTATTCGTCCTGATCTTCACTGGATTGGTCATCCATCTCCATCGGAAA
CTCATCCACTATGAACAGGCGGGGATTTTGAGTCCAGGCGGTGTGGTAGG
CATGAGCATGAGCAGACATAAGCCCCTCCCGTGGCGGTGGCTATTCTATG
TGATGTATTCTGCGCTGGGGATGATTACCCGCTACGCCTGGGTCATCATG
ATGGGCGCAACCTGGGAACTACTCGCCTTTATATTCCGTGCTCTCCTTAC
ACGACAACAGAACAACTCGAATTGGGACACCGTCTACACGATCATGTTCC
TCCTTGCTCCGCTCTATGAGTACAACAACAACTTCAATCGCCTCTGCCAC
CAGTGCTTTGGCCTCTTCAACCCAAACATGCACCAACCCCAAACCAGGGA
AGAATGGCTACCTGCCTCCAGAAGCGTGTGACAGTATCCTGCTCTATGTT
CCCTCTCTAACTGCCGCAGTATTGTTCTGCGTGCTATACGGCCTAACCCT
CATCTGCCACGGGGTACAAGCATATCTCTACAAGAAGATACGTATCATCT
TCCGACTGTGCCAATACGCACAAGGCACGGATCCGAATAACCCCGTCCTG
ACGCATGAAGCATACGAATATGTCTTTGATGCGGTGCCGATGTTCATTGC
GCTGGCGTTGTTGAATGTGGTGCATCCGGGGCGGGTGTTGCAGGGCCCGG
AGTCGGAGTTTCCGAGGGTGAGTCGGGCGGAGAAGAAGAGGCTGAAGAGG
GAGAAGAAACAGTTGAAGAGGGAGAGGAAGGAGGCGAAGAGAATGGAGAA
GGAGATGAGGAAGGGAGGGAAGGGTGGGTGGTGGTGGAAACGGGGGAGGG
AGAGTGAGGCGTTTGAGATTATTCCGATGCAGGAGGAGGTAGAGGGGAGG
GTGTAGGGATAAACGCCTTCCTCTACATGACCCTCGGCCGACTCATCTAC
TTCTTCACTCCGGACCAACAACTCGCCGGCATCACCGCCCGACGCTACGG
CCGACTCTTCGTCTGGCTCGACATCTTCGCCTTCCTCGTCCAGCTCGGCG
GCGCAGCCATCACCACCGAGACGGGTGTACCGACCAGCAGAATCATGCTA
GGCGTACATATATACATGGGTGGAATTGGATTGCAGGAGTTATTCGTCCT
GATCTTCACTGGATTGGTCATCCATCTCCATCGGAAACTCATCCACTATG
AACAGGCGGGGATTTTGAGTCCAGGCGGTGTGGTAGGCATGAGCATGAGC
AGACATAAGCCCCTCCCGTGGCGGTGGCTATTCTATGTGATGTATTCTGC
GCTGGGGATGATTACCCGCTACGCCTGGGTCATCATGATGGGCGCAACCT
GGGAACTACTCGCCTTTATATTCCGTGCTCTCCTTACACGACAACAGAAC
AACTCGAATTGGGACACCGTCTACACGATCATGTTCCTCCTTGCTCCGCT
CTATGAGTACAACAACAACTTCAATCGCCTCTGCCACCAGTGCTTTGGCC
TCTTCAACCCAAACATGCACCAACCCCAAACCAGGGAAGAATGGCTACCT
GCCTCCAGAAGCGTGTGACAGTATCCTGCTCTATGTTCCCTCTCTAACTG
CCGCAGTATTGTTCTGCGTGCTATACGGCCTAACCCTCATCTGCCACGGG
GTACAAGCATATCTCTACAAGAAGATACGTATCATCTTCCGACTGTGCCA
ATACGCACAAGGCACGGATCCGAATAACCCCGTCCTGACGCATGAAGCAT
ACGAATATGTCTTTGATGCGGTGCCGATGTTCATTGCGCTGGCGTTGTTG
AATGTGGTGCATCCGGGGCGGGTGTTGCAGGGCCCGGAGTCGGAGTTTCC
GAGGGTGAGTCGGGCGGAGAAGAAGAGGCTGAAGAGGGAGAAGAAACAGT
TGAAGAGGGAGAGGAAGGAGGCGAAGAGAATGGAGAAGGAGATGAGGAAG
GGAGGGAAGGGTGGGTGGTGGTGGAAACGGGGGAGGGAGAGTGAGGCGTT
TGAGATTATTCCGATGCAGGAGGAGGTAGAGGGGAGGGTGTAGGGATAAA
CGCCTTCCTCTACATGACCCTCGGCCGACTCATCTACTTCTTCACTCCGG
ACCAACAACTCGCCGGCATCACCGCCCGACGCTACGGCCGACTCTTCGTC
TGGCTCGACATCTTCGCCTTCCTCGTCCAGCTCGGCGGCGCAGCCATCAC
CACCGAGACGGGTGTACCGACCAGCAGAATCATGCTAGGCGTACATATAT
ACATGGGTGGAATTGGATTGCAGGAGTTATTCGTCCTGATCTTCACTGGA
TTGGTCATCCATCTCCATCGGAAACTCATCCACTATGAACAGGCGGGGAT
TTTGAGTCCAGGCGGTGTGGTAGGCATGAGCATGAGCAGACATAAGCCCC
TCCCGTGGCGGTGGCTATTCTATGTGATGTATTCTGCGCTGGGGATGATT
ACCCGCTACGCCTGGGTCATCATGATGGGCGCAACCTGGGAACTACTCGC
CTTTATATTCCGTGCTCTCCTTACACGACAACAGAACAACTCGAATTGGG
ACACCGTCTACACGATCATGTTCCTCCTTGCTCCGCTCTATGAGTACAAC
AACAACTTCAATCGCCTCTGCCACCAGTGCTTTGGCCTCTTCAACCCAAA
CATGCACCAACCCCAAACCAGGGAAGAATGGCTACCTGCCTCCAGAAGCG
TGTGACAGTATCCTGCTCTATGTTCCCTCTCTAACTGCCGCAGTATTGTT
CTGCGTGCTATACGGCCTAACCCTCATCTGCCACGGGGTACAAGCATATC
TCTACAAGAAGATACGTATCATCTTCCGACTGTGCCAATACGCACAAGGC
ACGGATCCGAATAACCCCGTCCTGACGCATGAAGCATACGAATATGTCTT
TGATGCGGTGCCGATGTTCATTGCGCTGGCGTTGTTGAATGTGGTGCATC
CGGGGCGGGTGTTGCAGGGCCCGGAGTCGGAGTTTCCGAGGGTGAGTCGG
GCGGAGAAGAAGAGGCTGAAGAGGGAGAAGAAACAGTTGAAGAGGGAGAG
GAAGGAGGCGAAGAGAATGGAGAAGGAGATGAGGAAGGGAGGGAAGGGTG
GGTGGTGGTGGAAACGGGGGAGGGAGAGTGAGGCGTTTGAGATTATTCCG
ATGCAGGAGGAGGTAGAGGGGAGGGTGTAGGGATAAACGCCTTCCTCTAC
ATGACCCTCGGCCGACTCATCTACTTCTTCACTCCGGACCAACAACTCGC
CGGCATCACCGCCCGACGCTACGGCCGACTCTTCGTCTGGCTCGACATCT
TCGCCTTCCTCGTCCAGCTCGGCGGCGCAGCCATCACCACCGAGACGGGT
GTACCGACCAGCAGAATCATGCTAGGCGTACATATATACATGGGTGGAAT
TGGATTGCAGGAGTTATTCGTCCTGATCTTCACTGGATTGGTCATCCATC
TCCATCGGAAACTCATCCACTATGAACAGGCGGGGATTTTGAGTCCAGGC
GGTGTGGTAGGCATGAGCATGAGCAGACATAAGCCCCTCCCGTGGCGGTG
GCTATTCTATGTGATGTATTCTGCGCTGGGGATGATTACCCGCTACGCCT
GGGTCATCATGATGGGCGCAACCTGGGAACTACTCGCCTTTATATTCCGT
GCTCTCCTTACACGACAACAGAACAACTCGAATTGGGACACCGTCTACAC
GATCATGTTCCTCCTTGCTCCGCTCTATGAGTACAACAACAACTTCAATC
GCCTCTGCCACCAGTGCTTTGGCCTCTTCAACCCAAACATGCACCAACCC
CAAACCAGGGAAGAATGGCTACCTGCCTCCAGAAGCGTGTGACAGTATCC
TGCTCTATGTTCCCTCTCTAACTGCCGCAGTATTGTTCTGCGTGCTATAC
GGCCTAACCCTCATCTGCCACGGGGTACAAGCATATCTCTACAAGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:6097078..6098395 - |
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