You are here

Home

KJC3_006579-T1, KJC3_006579-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006579-T1
Unique NameKJC3_006579-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:6102534..6103223-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006579-T1 ID=KJC3_006579-T1|Name=KJC3_006579-T1|organism=Aspergillus niger KJC3|type=mRNA|length=690bp|location=Sequence derived from alignment at ch4:6102534..6103223- (Aspergillus niger KJC3)
ATGACTGATTATATTGGCCATCCTTTGGGGCTAGTAGGATGGTTTGCCCG
AACGATCCAAGCCATCAGCTCGATCATCGTCCTCGGAATTACAGCCTGGG
CTGTACAAGAGAACAACAAGACGCTCAGCGTTATTTTTTCTCTTGTCATT
GTAAGTAGTTGGTCAAGTGACGTATATAATCAGATCTCGTTCTCACCTTG
GTACAGGCTACAACGAGTCTGGTCGTCTTAGCTGTAGCTGTAGGCATTAG
CTGCCTCGGACGTCGGGCCAAATGGCACATTATCCCACTACTTGTCACTG
ACGCAGTCATATCCTATCTGTAAGTAGCTATCGAATGGTATAGGTAAGAC
TTTTCAAGCTAAATGCTTACCACTGCAGATGGCTCACCTCGTTCATTCTG
CTCGCTCTGAACTTCAACCGGAGGACCTGTCGCGTGAACCGCTGGATCGG
AGAAGTATCTTGCTCCCGAAGCTATACTGCCGAGGCATTTAGTTTTATTG
CATTGTAAGTGACTCGGAGAGACCCCGTCAATCTTCTTTGTTGACTTGTT
ACAGTTTCACTACTCTCATGGGCCTATTCTTGGAGACTGCCTACCTTTAC
TGGGCGAAGCCCGATAACGTCCTGCGAACAGAAAAGAGGCCACACCAAGA
ACGCCTTTCTGAAAACCTCAATGCGGCTGGACTGACATAA
back to top

Coding sequence (CDS) from alignment at ch4:6102534..6103223-

>KJC3_006579-T1 ID=KJC3_006579-T1|Name=KJC3_006579-T1|organism=Aspergillus niger KJC3|type=CDS|length=2100bp|location=Sequence derived from alignment at ch4:6102534..6103223- (Aspergillus niger KJC3)
TTTCACTACTCTCATGGGCCTATTCTTGGAGACTGCCTACCTTTACTGGG
CGAAGCCCGATAACGTCCTGCGAACAGAAAAGAGGCCACACCAAGAACGC
CTTTCTGAAAACCTCAATGCGGCTGGACTGACATAAATGGCTCACCTCGT
TCATTCTGCTCGCTCTGAACTTCAACCGGAGGACCTGTCGCGTGAACCGC
TGGATCGGAGAAGTATCTTGCTCCCGAAGCTATACTGCCGAGGCATTTAG
TTTTATTGCATTGCTACAACGAGTCTGGTCGTCTTAGCTGTAGCTGTAGG
CATTAGCTGCCTCGGACGTCGGGCCAAATGGCACATTATCCCACTACTTG
TCACTGACGCAGTCATATCCTATCTATGACTGATTATATTGGCCATCCTT
TGGGGCTAGTAGGATGGTTTGCCCGAACGATCCAAGCCATCAGCTCGATC
ATCGTCCTCGGAATTACAGCCTGGGCTGTACAAGAGAACAACAAGACGCT
CAGCGTTATTTTTTCTCTTGTCATTTTTCACTACTCTCATGGGCCTATTC
TTGGAGACTGCCTACCTTTACTGGGCGAAGCCCGATAACGTCCTGCGAAC
AGAAAAGAGGCCACACCAAGAACGCCTTTCTGAAAACCTCAATGCGGCTG
GACTGACATAAATGGCTCACCTCGTTCATTCTGCTCGCTCTGAACTTCAA
CCGGAGGACCTGTCGCGTGAACCGCTGGATCGGAGAAGTATCTTGCTCCC
GAAGCTATACTGCCGAGGCATTTAGTTTTATTGCATTGCTACAACGAGTC
TGGTCGTCTTAGCTGTAGCTGTAGGCATTAGCTGCCTCGGACGTCGGGCC
AAATGGCACATTATCCCACTACTTGTCACTGACGCAGTCATATCCTATCT
ATGACTGATTATATTGGCCATCCTTTGGGGCTAGTAGGATGGTTTGCCCG
AACGATCCAAGCCATCAGCTCGATCATCGTCCTCGGAATTACAGCCTGGG
CTGTACAAGAGAACAACAAGACGCTCAGCGTTATTTTTTCTCTTGTCATT
TTTCACTACTCTCATGGGCCTATTCTTGGAGACTGCCTACCTTTACTGGG
CGAAGCCCGATAACGTCCTGCGAACAGAAAAGAGGCCACACCAAGAACGC
CTTTCTGAAAACCTCAATGCGGCTGGACTGACATAAATGGCTCACCTCGT
TCATTCTGCTCGCTCTGAACTTCAACCGGAGGACCTGTCGCGTGAACCGC
TGGATCGGAGAAGTATCTTGCTCCCGAAGCTATACTGCCGAGGCATTTAG
TTTTATTGCATTGCTACAACGAGTCTGGTCGTCTTAGCTGTAGCTGTAGG
CATTAGCTGCCTCGGACGTCGGGCCAAATGGCACATTATCCCACTACTTG
TCACTGACGCAGTCATATCCTATCTATGACTGATTATATTGGCCATCCTT
TGGGGCTAGTAGGATGGTTTGCCCGAACGATCCAAGCCATCAGCTCGATC
ATCGTCCTCGGAATTACAGCCTGGGCTGTACAAGAGAACAACAAGACGCT
CAGCGTTATTTTTTCTCTTGTCATTTTTCACTACTCTCATGGGCCTATTC
TTGGAGACTGCCTACCTTTACTGGGCGAAGCCCGATAACGTCCTGCGAAC
AGAAAAGAGGCCACACCAAGAACGCCTTTCTGAAAACCTCAATGCGGCTG
GACTGACATAAATGGCTCACCTCGTTCATTCTGCTCGCTCTGAACTTCAA
CCGGAGGACCTGTCGCGTGAACCGCTGGATCGGAGAAGTATCTTGCTCCC
GAAGCTATACTGCCGAGGCATTTAGTTTTATTGCATTGCTACAACGAGTC
TGGTCGTCTTAGCTGTAGCTGTAGGCATTAGCTGCCTCGGACGTCGGGCC
AAATGGCACATTATCCCACTACTTGTCACTGACGCAGTCATATCCTATCT
ATGACTGATTATATTGGCCATCCTTTGGGGCTAGTAGGATGGTTTGCCCG
AACGATCCAAGCCATCAGCTCGATCATCGTCCTCGGAATTACAGCCTGGG
CTGTACAAGAGAACAACAAGACGCTCAGCGTTATTTTTTCTCTTGTCATT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006579KJC3_006579Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006579-T1KJC3_006579-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006579-T1.cdsKJC3_006579-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006579-T1.exon4KJC3_006579-T1.exon4Aspergillus niger KJC3exon
KJC3_006579-T1.exon3KJC3_006579-T1.exon3Aspergillus niger KJC3exon
KJC3_006579-T1.exon2KJC3_006579-T1.exon2Aspergillus niger KJC3exon
KJC3_006579-T1.exon1KJC3_006579-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteantiSMASH:Cluster_4.13
DBxrefInterPro:IPR008253
DBxrefPFAM:PF01284
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:6102534..6103223 -
Powered by Drupal