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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:6144218..6145306- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006596-T1 ID=KJC3_006596-T1|Name=KJC3_006596-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1089bp|location=Sequence derived from alignment at ch4:6144218..6145306- (Aspergillus niger KJC3)
GTCCGACACTTTGCCGCTTTTGAAAGACTAATCATCAATGTAACCAGTGA
ATACCACCCTTGACACACACAAATTTCCGGATCCCTTGCCAAAATGGCCA
GAATGCCCTGGACTGGGAAATGAATGTCTATGATGCGTGACTGCGCCAGG
ACAGTGGCACTCAAAGATCCCTTGGCTAGCATTTGCGAGCCTAGAGTCAT
TTTCGACCAAAGCAGGGCCAAGGGAAAGAACATTTAGCCCGAACGTGCCC
TGGACGCGGCCACATACCGACCACGAGCACTCAAGAAACACAACATTCCT
CAGGCTTTATTTAATGCCTCGTGTCTCCCCACAATTGCGTGCAGGGTAGC
TATTCCCTGCACATCTTCCAGAATTACACTGAGCCCCTCATTATCTATCA
GCCATGCGCATCGTTGCCATTGTCACCGGTCTTGTGTCCCTAAGCATCCT
GACGGCGGCTCAGGGGGTCGGGGCCGAGGGCCCCGATGAGTTCACTGCGC
TCGGCTGCCCCGACACCACCAAACCGCAGGCCTCCCAAGCCGAACAGCTC
GCCGCCTGGGACGACTTTACCAATCTGCTCTACACCGAGAAGCGCCTCAC
TGACGCCTTCACCAAATATGTCGCGACCGGCTATATCAATCATTCGCCCC
TCGTGTCTGCGAACGGCATAGATACCACCCTGGGCGAATTGTCAGGCATC
GTCCCCAACGTGGATTCTCAATTGCAGCATGTGTTTGTCGGATGGGATAA
GAATGGCACCGCCTATGGAACTGCTCATACCAAGGTTACTGGCAATGCGA
CCATGGGGATTCCCAACTCCGCCTTGGTCGACATGATCCGCATGGTGGGG
ACATGTTTAGTGGAACATTATGACGTGCAGCAAGCCGTGGATGGAACTGC
CCCGAATCCCATCGCGTTCTTCTAAATGCAGAAGATACATGGACCGGAGT
GGGGAGCCACTGATTAGCACGAGAAAGATGGACGCAAGCGCAAATCTCTG
TATGAACACTCACCGTTATGCATGTATAACAGAACTAGTTGAGAGAGGTG
GACGAATCCCAAGAGTTATGGCTATTACTTATGAAGATG back to topCoding sequence (CDS) from alignment at ch4:6144218..6145306- >KJC3_006596-T1 ID=KJC3_006596-T1|Name=KJC3_006596-T1|organism=Aspergillus niger KJC3|type=CDS|length=522bp|location=Sequence derived from alignment at ch4:6144218..6145306- (Aspergillus niger KJC3)
ATGCGCATCGTTGCCATTGTCACCGGTCTTGTGTCCCTAAGCATCCTGAC
GGCGGCTCAGGGGGTCGGGGCCGAGGGCCCCGATGAGTTCACTGCGCTCG
GCTGCCCCGACACCACCAAACCGCAGGCCTCCCAAGCCGAACAGCTCGCC
GCCTGGGACGACTTTACCAATCTGCTCTACACCGAGAAGCGCCTCACTGA
CGCCTTCACCAAATATGTCGCGACCGGCTATATCAATCATTCGCCCCTCG
TGTCTGCGAACGGCATAGATACCACCCTGGGCGAATTGTCAGGCATCGTC
CCCAACGTGGATTCTCAATTGCAGCATGTGTTTGTCGGATGGGATAAGAA
TGGCACCGCCTATGGAACTGCTCATACCAAGGTTACTGGCAATGCGACCA
TGGGGATTCCCAACTCCGCCTTGGTCGACATGATCCGCATGGTGGGGACA
TGTTTAGTGGAACATTATGACGTGCAGCAAGCCGTGGATGGAACTGCCCC
GAATCCCATCGCGTTCTTCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006596-T1.utr3p1 | KJC3_006596-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.14 |
| Note | SECRETED:SignalP(1-24) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:6144218..6145306 - |
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