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KJC3_006600-T2, KJC3_006600-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006600-T2
Unique NameKJC3_006600-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:6150004..6152630-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006600-T2 ID=KJC3_006600-T2|Name=KJC3_006600-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2627bp|location=Sequence derived from alignment at ch4:6150004..6152630- (Aspergillus niger KJC3)
CTCTAGCGCACTCCGGTAATCACCTTATTGTTCAGCGGTTGTCGCGGCAT
GGCTGATCGAGCAAGCACCCTCGCGCGCGGAAATGGCAAGCAGAAGTCGT
GCGAAGCCTGTCAGAAGACGAAGGTCAAATGCGATTATAAGACGCCATCC
TGTGGTCGGTGTTCTCGAAGGGGAACTATGTGCTTGTACAGCCGTACACC
TGGGACAAGCAAATTTCGGATCACAAAAGGGGAGGCCAGTGCCCCATATA
CTGTCTCGTGGGCTCCTACCCGCTCCAATAGTTTGTATTGTGATTGCGTA
GTCACTAATCCGCGCAGAAGGCCATGCTCAGATCCGCCATTTGCCCCACC
CCGAGAAGACATACCGGCACAGGGCATCACAATCCACACAGTGGCCTCAG
CAGACACGGGCTTCCTGGGGCCGACCAGCTATCGGGCCGAAGTGCAACAC
GCCGCACATTCGCACATCATTGTAAATACTGCTCAAAGTATGGGACATGA
GGGAGCGGCGGACGCTCAAGGAACCCTGACGGTCGAACTGGAGCGCCTGG
AGCAGGGTCTAAGGATCATTGACTATCTGAATGCGCACGCCACCTTGATC
CGCAAACTGGTCGACCGGATGTATACGCTGGGCCGACTTGTGATCATCCC
GAAAGTCATCATGCGAGGTGTACTAGATAGCCTATGGGAGGCACTCAGCG
AGGATCCCGTCCAGAGCGATGCTTTGAATTCGAGAAGTGTGGTTCACATC
TTTGAAAACTCATACAAGCCCATGCCCTCGGGCAAGCCCATTGGGGTGGA
GCAGTTTTGCTCCTTGATTACTGGGGTCAATGTCCGGTGGGAGACTATTG
GGAACGTCCTAGTGATGGCCTGCTTGTGCTTGTGTCATATTGCCGAATCG
GAGGCGACACTGTTGGATCCGTCAGCTAGCTCCACGCCGGCGCAGATTCT
ATCTCGACTCCGAGAAATGACGAATCGGGCGATATTTCTCTGCAGTGGAC
TCCCACTGTGCAATGAGCTGGTGGTCTGTCTGAAATATAACCACATGTTG
CTTATGTCTCAGCTCTGGGGCAATACCGGTGTGTGGCTACCGGCCCGCCA
TCTGAGACACTTCTGGTGCTTGAGCTGACTTCGCAAAATGCCAGATCAGC
GAATTTATTATGCCCTTGGGGAGCTGACGTCTGCTGTATATGCCACGGGC
ATGCACCAGCACAGGGGGTCTGGTGACAAATATCCCAAATTTCTCAGTGC
ATGGCGCCAGAGATGTTTCGCTATTGTTTATTCGATGGACAAAATCTTTG
CCACCTTCTTCGGGAGACCACCATTCCTCAATCGCCACTACTGCAATATA
GAGCCAGTCGTTGAGCTACGCGGCGTGATAAAAGATCCAAGCCACCCAAC
ACTGGAGAGGCTCGACGAGGTCTATTGTAATGAAAAGAGCGGGAACGATC
AACCGGAGCCGCCAGGCTACCTCCGTGTTCGTTACCTCCTGTCCATTGTT
CGTGAGGAGATTCTCGAACTTCACCTCGGAACAGCGACTGACGACGTTTC
TGTAAAATCAGAGTATGATTTATTACCGGTCTAGGCTCAACCACCTCGCT
TTCGTTACTACTAGTCCTCTGGATACCGCACTAACAGTTTCGCAGACAGT
TAATCCGCATGCTCCAGTCCCTCTGGGAGTCCTGCTCCCCTCGGTTACAA
TATTCCCCGCAGCTATGGACAATACCCATGCCACGTCAAACCATCTGGTT
CATCTTTGCTCTCTACTTGGAACATCGCTACTCGTTGTTTTTAATTCAAC
GGCTCCGGGCCCAAAAGTGTCCCTCCGAGTCCCCCGCTCCGTTGCTGTCT
ATAGCCAAAGATATCCTGTCAACCATTCTGGTGCTTAACAAGGAACGCGA
GCGCCTGCGAGAGATCCGTAGTGACTTGGGCAGTGTGGTGGGTTCAAATC
ACAATTCTTCGCGGCAAAACATGCTGATGGGCCGCTGCCAGCTTCTTCCC
TTTGGACTTCCCACCGCAGAAGTACTATTGCAAGATCTCCTTCATACTCC
CGTGGAATTTCCGAGCATACCGTGTGGACGACCTTCCCGGTCGGATACCA
TCCGCGACCTCATTCTGTTCGTCTCGTGTCTCGAATGGGCTGTTAAGCCG
GAGTCGGGTCATTTCGAATTCGCGCAAACCATCCAAGAGAGGTTCACCCG
ACTGCTCGATGCGATCCTTGACCCGCATCGTAGTAGACCAGTTCAGGTAC
CTGGTGGCGCTACAGGTGCGGACTGGCCTCCTGAAGACAGCGGATACCTT
AACTCAGAGGTCGATGTTAACCACTTCGTCGATTGGGATTTTACTAGTAC
CCAGGGTGTCGGTTTTGATTTGTTGAGCGGGTCGATAATCTGAGCGTCGC
AAATAGTAATTGTGGACCAAAACAAGTACGCAGTGCTTCCCAACATATAA
AACGCATGAACTTGACAAGAACACTGGGAGATGGATGATGGATGAACTTA
GAGTACGTGAGGAAATCTGAGGAACTAGCTAAGGCCACCAAGGTGGGCGC
TGAGTGTGCAGCCTGAGGCCGCAGAGCCGTCAGAACTTTGAACGACTTGT
CATGACATGATTATGAGAAAATTTATG
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Coding sequence (CDS) from alignment at ch4:6150004..6152630-

>KJC3_006600-T2 ID=KJC3_006600-T2|Name=KJC3_006600-T2|organism=Aspergillus niger KJC3|type=CDS|length=4680bp|location=Sequence derived from alignment at ch4:6150004..6152630- (Aspergillus niger KJC3)
AGTATGATTTATTACCGGTCTAGGCTCAACCACCTCGCTTTCGTTACTAC
TAGTCCTCTGGATACCGCACTAACAGTTTCGCAGACAGTTAATCCGCATG
CTCCAGTCCCTCTGGGAGTCCTGCTCCCCTCGGTTACAATATTCCCCGCA
GCTATGGACAATACCCATGCCACGTCAAACCATCTGGTTCATCTTTGCTC
TCTACTTGGAACATCGCTACTCGTTGTTTTTAATTCAACGGCTCCGGGCC
CAAAAGTGTCCCTCCGAGTCCCCCGCTCCGTTGCTGTCTATAGCCAAAGA
TATCCTGTCAACCATTCTGGTGCTTAAATCAGCGAATTTATTATGCCCTT
GGGGAGCTGACGTCTGCTGTATATGCCACGGGCATGCACCAGCACAGGGG
GTCTGGTGACAAATATCCCAAATTTCTCAGTGCATGGCGCCAGAGATGTT
TCGCTATTGTTTATTCGATGGACAAAATCTTTGCCACCTTCTTCGGGAGA
CCACCATTCCTCAATCGCCACTACTGCAATATAGAGCCAGTCGTTGAGCT
ACGCGGCGTGATAAAAGATCCAAGCCACCCAACACTGGAGAGGCTCGACG
AGGTCTATTGTAATGAAAAGAGCGGGAACGATCAACCGGAGCCGCCAGGC
TACCTCCGTATGTGCTTGTACAGCCGTACACCTGGGACAAGCAAATTTCG
GATCACAAAAGGGGAGGCCAGTGCCCCATATACTGTCTCGTGGGCTCCTA
CCCGCTCCAATAGTTTGTATTGTGATTGCGTAGTCACTAATCCGCGCAGA
AGGCCATGCTCAGATCCGCCATTTGCCCCACCCCGAGAAGACATACCGGC
ACAGGGCATCACAATCCACACAGTGGCCTCAGCAGACACGGGCTTCCTGG
GGCCGACCAGCTATCGGGCCGAAGTGCAACACGCCGCACATTCGCACATC
ATTGTAAATACTGCTCAAAGTATGGGACATGAGGGAGCGGCGGACGCTCA
AGGAACCCTGACGGTCGAACTGGAGCGCCTGGAGCAGGGTCTAAGGATCA
TTGACTATCTGAATGCGCACGCCACCTTGATCCGCAAACTGGTCGACCGG
ATGTATACGCTGGGCCGACTTGTGATCATCCCGAAAGTCATCATGCGAGG
TGTACTAGATAGCCTATGGGAGGCACTCAGCGAGGATCCCGTCCAGAGCG
ATGCTTTGAATTCGAGAAGTGTGGTTCACATCTTTGAAAACTCATACAAG
CCCATGCCCTCGGGCAAGCCCATTGGGGTGGAGCAGTTTTGCTCCTTGAT
TACTGGGGTCAATGTCCGGTGGGAGACTATTGGGAACGTCCTAGTGATGG
CCTGCTTGTGCTTGTGTCATATTGCCGAATCGGAGGCGACACTGTTGGAT
CCGTCAGCTAGCTCCACGCCGGCGCAGATTCTATCTCGACTCCGAGAAAT
GACGAATCGGGCGATATTTCTCTGCAGTGGACTCCCACTGTGCAATGAGC
TGGTGGTCTGTCTGAAATATAACCACATGTTGCTTATGTCTCAGCTCTGG
GGCAATACCGAGTATGATTTATTACCGGTCTAGGCTCAACCACCTCGCTT
TCGTTACTACTAGTCCTCTGGATACCGCACTAACAGTTTCGCAGACAGTT
AATCCGCATGCTCCAGTCCCTCTGGGAGTCCTGCTCCCCTCGGTTACAAT
ATTCCCCGCAGCTATGGACAATACCCATGCCACGTCAAACCATCTGGTTC
ATCTTTGCTCTCTACTTGGAACATCGCTACTCGTTGTTTTTAATTCAACG
GCTCCGGGCCCAAAAGTGTCCCTCCGAGTCCCCCGCTCCGTTGCTGTCTA
TAGCCAAAGATATCCTGTCAACCATTCTGGTGCTTAAATCAGCGAATTTA
TTATGCCCTTGGGGAGCTGACGTCTGCTGTATATGCCACGGGCATGCACC
AGCACAGGGGGTCTGGTGACAAATATCCCAAATTTCTCAGTGCATGGCGC
CAGAGATGTTTCGCTATTGTTTATTCGATGGACAAAATCTTTGCCACCTT
CTTCGGGAGACCACCATTCCTCAATCGCCACTACTGCAATATAGAGCCAG
TCGTTGAGCTACGCGGCGTGATAAAAGATCCAAGCCACCCAACACTGGAG
AGGCTCGACGAGGTCTATTGTAATGAAAAGAGCGGGAACGATCAACCGGA
GCCGCCAGGCTACCTCCGTATGTGCTTGTACAGCCGTACACCTGGGACAA
GCAAATTTCGGATCACAAAAGGGGAGGCCAGTGCCCCATATACTGTCTCG
TGGGCTCCTACCCGCTCCAATAGTTTGTATTGTGATTGCGTAGTCACTAA
TCCGCGCAGAAGGCCATGCTCAGATCCGCCATTTGCCCCACCCCGAGAAG
ACATACCGGCACAGGGCATCACAATCCACACAGTGGCCTCAGCAGACACG
GGCTTCCTGGGGCCGACCAGCTATCGGGCCGAAGTGCAACACGCCGCACA
TTCGCACATCATTGTAAATACTGCTCAAAGTATGGGACATGAGGGAGCGG
CGGACGCTCAAGGAACCCTGACGGTCGAACTGGAGCGCCTGGAGCAGGGT
CTAAGGATCATTGACTATCTGAATGCGCACGCCACCTTGATCCGCAAACT
GGTCGACCGGATGTATACGCTGGGCCGACTTGTGATCATCCCGAAAGTCA
TCATGCGAGGTGTACTAGATAGCCTATGGGAGGCACTCAGCGAGGATCCC
GTCCAGAGCGATGCTTTGAATTCGAGAAGTGTGGTTCACATCTTTGAAAA
CTCATACAAGCCCATGCCCTCGGGCAAGCCCATTGGGGTGGAGCAGTTTT
GCTCCTTGATTACTGGGGTCAATGTCCGGTGGGAGACTATTGGGAACGTC
CTAGTGATGGCCTGCTTGTGCTTGTGTCATATTGCCGAATCGGAGGCGAC
ACTGTTGGATCCGTCAGCTAGCTCCACGCCGGCGCAGATTCTATCTCGAC
TCCGAGAAATGACGAATCGGGCGATATTTCTCTGCAGTGGACTCCCACTG
TGCAATGAGCTGGTGGTCTGTCTGAAATATAACCACATGTTGCTTATGTC
TCAGCTCTGGGGCAATACCGAGTATGATTTATTACCGGTCTAGGCTCAAC
CACCTCGCTTTCGTTACTACTAGTCCTCTGGATACCGCACTAACAGTTTC
GCAGACAGTTAATCCGCATGCTCCAGTCCCTCTGGGAGTCCTGCTCCCCT
CGGTTACAATATTCCCCGCAGCTATGGACAATACCCATGCCACGTCAAAC
CATCTGGTTCATCTTTGCTCTCTACTTGGAACATCGCTACTCGTTGTTTT
TAATTCAACGGCTCCGGGCCCAAAAGTGTCCCTCCGAGTCCCCCGCTCCG
TTGCTGTCTATAGCCAAAGATATCCTGTCAACCATTCTGGTGCTTAAATC
AGCGAATTTATTATGCCCTTGGGGAGCTGACGTCTGCTGTATATGCCACG
GGCATGCACCAGCACAGGGGGTCTGGTGACAAATATCCCAAATTTCTCAG
TGCATGGCGCCAGAGATGTTTCGCTATTGTTTATTCGATGGACAAAATCT
TTGCCACCTTCTTCGGGAGACCACCATTCCTCAATCGCCACTACTGCAAT
ATAGAGCCAGTCGTTGAGCTACGCGGCGTGATAAAAGATCCAAGCCACCC
AACACTGGAGAGGCTCGACGAGGTCTATTGTAATGAAAAGAGCGGGAACG
ATCAACCGGAGCCGCCAGGCTACCTCCGTATGTGCTTGTACAGCCGTACA
CCTGGGACAAGCAAATTTCGGATCACAAAAGGGGAGGCCAGTGCCCCATA
TACTGTCTCGTGGGCTCCTACCCGCTCCAATAGTTTGTATTGTGATTGCG
TAGTCACTAATCCGCGCAGAAGGCCATGCTCAGATCCGCCATTTGCCCCA
CCCCGAGAAGACATACCGGCACAGGGCATCACAATCCACACAGTGGCCTC
AGCAGACACGGGCTTCCTGGGGCCGACCAGCTATCGGGCCGAAGTGCAAC
ACGCCGCACATTCGCACATCATTGTAAATACTGCTCAAAGTATGGGACAT
GAGGGAGCGGCGGACGCTCAAGGAACCCTGACGGTCGAACTGGAGCGCCT
GGAGCAGGGTCTAAGGATCATTGACTATCTGAATGCGCACGCCACCTTGA
TCCGCAAACTGGTCGACCGGATGTATACGCTGGGCCGACTTGTGATCATC
CCGAAAGTCATCATGCGAGGTGTACTAGATAGCCTATGGGAGGCACTCAG
CGAGGATCCCGTCCAGAGCGATGCTTTGAATTCGAGAAGTGTGGTTCACA
TCTTTGAAAACTCATACAAGCCCATGCCCTCGGGCAAGCCCATTGGGGTG
GAGCAGTTTTGCTCCTTGATTACTGGGGTCAATGTCCGGTGGGAGACTAT
TGGGAACGTCCTAGTGATGGCCTGCTTGTGCTTGTGTCATATTGCCGAAT
CGGAGGCGACACTGTTGGATCCGTCAGCTAGCTCCACGCCGGCGCAGATT
CTATCTCGACTCCGAGAAATGACGAATCGGGCGATATTTCTCTGCAGTGG
ACTCCCACTGTGCAATGAGCTGGTGGTCTGTCTGAAATATAACCACATGT
TGCTTATGTCTCAGCTCTGGGGCAATACCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006600KJC3_006600Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006600-T2KJC3_006600-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006600-T2.cdsKJC3_006600-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006600-T2.utr3p2KJC3_006600-T2.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_006600-T2.utr3p1KJC3_006600-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006600-T2.exon5KJC3_006600-T2.exon5Aspergillus niger KJC3exon
KJC3_006600-T2.exon4KJC3_006600-T2.exon4Aspergillus niger KJC3exon
KJC3_006600-T2.exon3KJC3_006600-T2.exon3Aspergillus niger KJC3exon
KJC3_006600-T2.exon2KJC3_006600-T2.exon2Aspergillus niger KJC3exon
KJC3_006600-T2.exon1KJC3_006600-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006600-T2.utr5p2KJC3_006600-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006600-T2.utr5p1KJC3_006600-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_4.14
DBxrefInterPro:IPR007219
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:6150004..6152630 -
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