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KJC3_006603-T1, KJC3_006603-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006603-T1
Unique NameKJC3_006603-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:6156077..6158666+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006603-T1 ID=KJC3_006603-T1|Name=KJC3_006603-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2590bp|location=Sequence derived from alignment at ch4:6156077..6158666+ (Aspergillus niger KJC3)
GGCGGATAGCCCGTCTCTGAGAGCCAGTCCTGCTATCAAAGTCCCGAGCG
CATGTCAGCGCTGTCGACGCCAAAAGCTAAAGGTCCGCTGAAACAAGTAA
GCCTGGAACAACCGATCGATCTGCTCACTTCTCGCCAGTGTGACATCCAA
CGGCCTTGTACCCTCTGCACCCGCGCCGGCGTCAGCTGTCTTCCCGGTTC
GGTGACCCGCTGGCGACCCTATCGACATCCGCAGGATAAGCCTGCATCAC
CAACGGTCGGAACGCTAAACGCAAGTGCCTCGACACGCCATGCATGTTCC
CCCCCCGTCCTCGATCCTGACCAGCATCCCCCCGAGGCTTCAAGTCCAGG
ATCACCTTCACACCGAAGAGATCGTGATTGGATATCAAGCTCTACTATAT
CTCTTCTAGGCGGAGTAAGGTCCCTGAACTCACTCACACCATGGGCCACT
TTAACAATCATTCGAATAGGCATTCAGCCTTCACAATGTGGCCGCACCGG
GGCCTCCTGCAACCAACGCACTCCCGGGAGCCCCTTTGCGTGAACCAGGA
TCTGCTTCCCCCAGCATTGAGGTTGAGACTTCTGACCTTCCCTCCTCAAC
TGCACTCGCGCCTTATGATCCGTCCTCTTCCGTTCTGAATGTTTTGATGT
CTCTACTGCCCAACTTTGATGCGGCCAGCCTTCTCGTAGATACGTATTTT
GATCGAGTGCACTGGTTCATGTTGATCTTCTATCAAGATGAGTTCCGTCA
ACGGTGGCCCAAATTATACGGTCGCTCTACTGAGAGGCCTCTAACATACG
CCCACCGTCACCTCGGCTTTCTTAGCACCTTCCTGATCGTAATCGCCATC
GGGCTGCAGTACGCCGGGCCTTACCGACAAGGGATTCTCTCGAGACATGG
GGTCGACATCAACCTAAGGGATCGCATCCTCTTTACTGTGAGATCGGGGC
TTCTTGACATAATGTCCCTCGGCTCTTTAGAAGCAGTCCAAACCTGCATT
TTACTGGGTACATATTATTTATATCATGGTGCTCCACGACTGGCATGGCC
GGTATGCGGATGTGGGCTTCGTATCGCCCAAGCTCTACATCTACACCGCC
GACAGCACCCCGTCCAATCGACTGATTTCCGAACCCGCAATGAGACTCGC
AAAAGATGCTGGTGGGCAGTGTATGAGATCGAAACCTTCTCTGCTGTGGC
ATATGGCTATCCGCACAGTATCCGCGATGATGATTGCGACGTAGAACCGT
TAGATCCATCAGCCAAGCTTCAGACTATGCAGTCTCCGGGTTCATTTAAT
GAACCCTTGACGTCCGATCCAACGCTACTTTCCTACAAGTACTTTATAAC
TAAACTGTCCACCATCACTAAAGGAGCCTTGGATGATCTGTATCGCGTTC
GCTCACATCCAGCTAGCCGATCTCATACAAATTCACCGGATATCCAAAGA
ATCGTTCGAAAGGTCGCCGACTACGATAACCGACTCCGCCAGTGGGAAGC
AGAGATCCCTTCCCCACTTCAGTGGCGCTGTGTTTCTCACCATTCTCATT
ATGCCTCCGCTGAAGAAGTCGATCGCGCTATTGGAGCCTCGGGGCCTCGC
TTCGAGAATCACATTTATCAACTCCAAGCTCTCGCTCTGTGGCTTGCCTA
TCAGAACGCACGCATCCTCACACATCGTCCTCTTCTTTCCTACACGCTTG
CCACTAGAGAGCGAACCAGCAAGTACAATGGCGAGGCTGCGTATTCGGTC
GACCCATTCAGGGCCTCCTTAAACGCCTGTCGTGATGCAGCGCTCAGCAT
GTCGGAGATCCTGTCTAGTCCGCTACTGGAAATTGTTCCGGAAACCTATG
CCGCTTCATTCGTTAGCATTCACACATTTACAGCAGGTGTAACCCTTGGC
ATTCTCAGCAGCATGGATCCTCTGGGCCCACAGTCTGCTGAGACGAAGTC
CGGGCTCCGCAAACTGATCGGCATTCAGGACAAGCTCCGAACACATTCAG
TCGCAGCACAGCAGGGATTATCCATTCTTCAGCGGCTGGCGAAATTAGTC
TTGGAAAAAGAACTTAGTGTGATGATGGAATTGTCTACCTCTACAACCAC
TGCGCGATCAGACGAGGCGACAATTACGGATTCTCCATCAACTCAGAGAA
CATCGGGTCAGGTCTCCGATAGATCAATAGCTAGAAATGATATTATTGAT
CCTATCGAGGTGTCCACGGCAATCCCAGCCCTCGATATCCCAGCTGAAGA
TGGCTCTGCCCAATACATGCACGATCCTGCTCTAACGGCTGCCCTTCAAG
ATTTCGATCAAGGTATTGCTCCCTAACACTTTGACCAAACTGTGCTAATA
CTTTCTATAGCTCTGTCGAATTATGCTCCTCGAGTTTCAGCAGGGTCTGA
CAGCTGTTCGGAAAACCCGTCATTTTGGCCCACCACGGAGGGCTTTCCGA
TCCTAGAGCAGAGCTGGATATGGGGTCTAGAGGGTGCACCTTTATACGGG
GAATACGCGGGTCCGAACCAGGATATATAAGTATCCTAAGGTGTATTACT
ATAACTGCGACACCACGAGTAGTGGTTCGATATCTTTGAG
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Coding sequence (CDS) from alignment at ch4:6156077..6158666+

>KJC3_006603-T1 ID=KJC3_006603-T1|Name=KJC3_006603-T1|organism=Aspergillus niger KJC3|type=CDS|length=3672bp|location=Sequence derived from alignment at ch4:6156077..6158666+ (Aspergillus niger KJC3)
ATGTCTCTACTGCCCAACTTTGATGCGGCCAGCCTTCTCGTAGATACGTA
TTTTGATCGAGTGCACTGGTTCATGTTGATCTTCTATCAAGATGAGTTCC
GTCAACGGTGGCCCAAATTATACGGTCGCTCTACTGAGAGGCCTCTAACA
TACGCCCACCGTCACCTCGGCTTTCTTAGCACCTTCCTGATCGTAATCGC
CATCGGGCTGCAGTACGCCGGGCCTTACCGACAAGGGATTCTCTCGAGAC
ATGGGGTCGACATCAACCTAAGGGATCGCATCCTCTTTACTGTGAGATCG
GGGCTTCTTGACATAATGTCCCTCGGCTCTTTAGAAGCAGTCCAAACCTG
CATTTTACTGGGTACATATTATTTATATCATGGTGCTCCACGACTGGCAT
GGCCGGTATGCGGATGTGGGCTTCGTATCGCCCAAGCTCTACATCTACAC
CGCCGACAGCACCCCGTCCAATCGACTGATTTCCGAACCCGCAATGAGAC
TCGCAAAAGATGCTGGTGGGCAGTGTATGAGATCGAAACCTTCTCTGCTG
TGGCATATGGCTATCCGCACAGTATCCGCGATGATGATTGCGACGTAGAA
CCGTTAGATCCATCAGCCAAGCTTCAGACTATGCAGTCTCCGGGTTCATT
TAATGAACCCTTGACGTCCGATCCAACGCTACTTTCCTACAAGTACTTTA
TAACTAAACTGTCCACCATCACTAAAGGAGCCTTGGATGATCTGTATCGC
GTTCGCTCACATCCAGCTAGCCGATCTCATACAAATTCACCGGATATCCA
AAGAATCGTTCGAAAGGTCGCCGACTACGATAACCGACTCCGCCAGTGGG
AAGCAGAGATCCCTTCCCCACTTCAGTGGCGCTGTGTTTCTCACCATTCT
CATTATGCCTCCGCTGAAGAAGTCGATCGCGCTATTGGAGCCTCGGGGCC
TCGCTTCGAGAATCACATTTATCAACTCCAAGCTCTCGCTCTGTGGCTTG
CCTATCAGAACGCACGCATCCTCACACATCGTCCTCTTCTTTCCTACACG
CTTGCCACTAGAGAGCGAACCAGCAAGTACAATGGCGAGGCTGCGTATTC
GGTCGACCCATTCAGGGCCTCCTTAAACGCCTGTCGTGATGCAGCGCTCA
GCATGTCGGAGATCCTGTCTAGTCCGCTACTGGAAATTGTTCCGGAAACC
TATGCCGCTTCATTCGTTAGCATTCACACATTTACAGCAGGTGTAACCCT
TGGCATTCTCAGCAGCATGGATCCTCTGGGCCCACAGTCTGCTGAGACGA
AGTCCGGGCTCCGCAAACTGATCGGCATTCAGGACAAGCTCCGAACACAT
TCAGTCGCAGCACAGCAGGGATTATCCATTCTTCAGCGGCTGGCGAAATT
AGTCTTGGAAAAAGAACTTAGTGTGATGATGGAATTGTCTACCTCTACAA
CCACTGCGCGATCAGACGAGGCGACAATTACGGATTCTCCATCAACTCAG
AGAACATCGGGTCAGGTCTCCGATAGATCAATAGCTAGAAATGATATTAT
TGATCCTATCGAGGTGTCCACGGCAATCCCAGCCCTCGATATCCCAGCTG
AAGATGGCTCTGCCCAATACATGCACGATCCTGCTCTAACGGCTGCCCTT
CAAGATTTCGATCAAGCTCTGTCGAATTATGCTCCTCGAGTTTCAGCAGG
GTCTGACAGCTGTTCGGAAAACCCGTCATTTTGGCCCACCACGGAGGGCT
TTCCGATCCTAGAGCAGAGCTGGATATGGGGTCTAGAGGGTGCACCTTTA
TACGGGGAATACGCGGGTCCGAACCAGGATATATAAATGTCTCTACTGCC
CAACTTTGATGCGGCCAGCCTTCTCGTAGATACGTATTTTGATCGAGTGC
ACTGGTTCATGTTGATCTTCTATCAAGATGAGTTCCGTCAACGGTGGCCC
AAATTATACGGTCGCTCTACTGAGAGGCCTCTAACATACGCCCACCGTCA
CCTCGGCTTTCTTAGCACCTTCCTGATCGTAATCGCCATCGGGCTGCAGT
ACGCCGGGCCTTACCGACAAGGGATTCTCTCGAGACATGGGGTCGACATC
AACCTAAGGGATCGCATCCTCTTTACTGTGAGATCGGGGCTTCTTGACAT
AATGTCCCTCGGCTCTTTAGAAGCAGTCCAAACCTGCATTTTACTGGGTA
CATATTATTTATATCATGGTGCTCCACGACTGGCATGGCCGGTATGCGGA
TGTGGGCTTCGTATCGCCCAAGCTCTACATCTACACCGCCGACAGCACCC
CGTCCAATCGACTGATTTCCGAACCCGCAATGAGACTCGCAAAAGATGCT
GGTGGGCAGTGTATGAGATCGAAACCTTCTCTGCTGTGGCATATGGCTAT
CCGCACAGTATCCGCGATGATGATTGCGACGTAGAACCGTTAGATCCATC
AGCCAAGCTTCAGACTATGCAGTCTCCGGGTTCATTTAATGAACCCTTGA
CGTCCGATCCAACGCTACTTTCCTACAAGTACTTTATAACTAAACTGTCC
ACCATCACTAAAGGAGCCTTGGATGATCTGTATCGCGTTCGCTCACATCC
AGCTAGCCGATCTCATACAAATTCACCGGATATCCAAAGAATCGTTCGAA
AGGTCGCCGACTACGATAACCGACTCCGCCAGTGGGAAGCAGAGATCCCT
TCCCCACTTCAGTGGCGCTGTGTTTCTCACCATTCTCATTATGCCTCCGC
TGAAGAAGTCGATCGCGCTATTGGAGCCTCGGGGCCTCGCTTCGAGAATC
ACATTTATCAACTCCAAGCTCTCGCTCTGTGGCTTGCCTATCAGAACGCA
CGCATCCTCACACATCGTCCTCTTCTTTCCTACACGCTTGCCACTAGAGA
GCGAACCAGCAAGTACAATGGCGAGGCTGCGTATTCGGTCGACCCATTCA
GGGCCTCCTTAAACGCCTGTCGTGATGCAGCGCTCAGCATGTCGGAGATC
CTGTCTAGTCCGCTACTGGAAATTGTTCCGGAAACCTATGCCGCTTCATT
CGTTAGCATTCACACATTTACAGCAGGTGTAACCCTTGGCATTCTCAGCA
GCATGGATCCTCTGGGCCCACAGTCTGCTGAGACGAAGTCCGGGCTCCGC
AAACTGATCGGCATTCAGGACAAGCTCCGAACACATTCAGTCGCAGCACA
GCAGGGATTATCCATTCTTCAGCGGCTGGCGAAATTAGTCTTGGAAAAAG
AACTTAGTGTGATGATGGAATTGTCTACCTCTACAACCACTGCGCGATCA
GACGAGGCGACAATTACGGATTCTCCATCAACTCAGAGAACATCGGGTCA
GGTCTCCGATAGATCAATAGCTAGAAATGATATTATTGATCCTATCGAGG
TGTCCACGGCAATCCCAGCCCTCGATATCCCAGCTGAAGATGGCTCTGCC
CAATACATGCACGATCCTGCTCTAACGGCTGCCCTTCAAGATTTCGATCA
AGCTCTGTCGAATTATGCTCCTCGAGTTTCAGCAGGGTCTGACAGCTGTT
CGGAAAACCCGTCATTTTGGCCCACCACGGAGGGCTTTCCGATCCTAGAG
CAGAGCTGGATATGGGGTCTAGAGGGTGCACCTTTATACGGGGAATACGC
GGGTCCGAACCAGGATATATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006603KJC3_006603Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006603-T1KJC3_006603-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006603-T1.utr5p1KJC3_006603-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_006603-T1.utr5p2KJC3_006603-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006603-T1.utr5p3KJC3_006603-T1.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006603-T1.exon1KJC3_006603-T1.exon1Aspergillus niger KJC3exon
KJC3_006603-T1.exon2KJC3_006603-T1.exon2Aspergillus niger KJC3exon
KJC3_006603-T1.exon3KJC3_006603-T1.exon3Aspergillus niger KJC3exon
KJC3_006603-T1.exon4KJC3_006603-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006603-T1.cdsKJC3_006603-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006603-T1.utr3p1KJC3_006603-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_4.14
DBxrefInterPro:IPR007219
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:6156077..6158666 +
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