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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:6162064..6163331+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006606-T1 ID=KJC3_006606-T1|Name=KJC3_006606-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1268bp|location=Sequence derived from alignment at ch4:6162064..6163331+ (Aspergillus niger KJC3)
AGATTTACACGAGCTTCGAGTGAAACCATATAAATGCTGGGTCAATCAGG
CCCTGCATCATTGTCAAATTAATAGTAGATTCATATGTCTTGTATTGTTC
ACCACATGGCTACCATGCCGTTCAATCCCAGCAAGTACAGCGACGAAGTT
CAGAAAGTGTCCAAGGACACCCCTCTGGAGGAAATCATCTATCTACTTAA
ACGAGATGGGGGCGTATTCGTGAAGGGTCTCATTTCAGAAGCAGACGTCG
ACCAAGCTCACCAAGAAGCCAAACCTCGTTTGGACGCAGACGTGGAATGG
AATGGCTCCTTCTTTCCGGGTGAGTCTGCTCTTCGCTGTCCTGTCTCGGA
CCGGCGCAGCTCATTTATCAGCACAAACTCAACGCGCACCGTCTCTGATC
GCGCACAGCCCGACCTATACCAAAACTCAAGTCATGAATCCGCTGTTTCG
TCAAGTCTGCGACCATTTTCTAACCTCCCGACGATGGTACTGGTGGGGAG
AAGAGAAGAAGATGTCTTTGTCTAAGCCGTACGTGCACTCCTGCACGGCC
ATGAGGATCGGCCCCGGCGCCAAGGCGCAGCCCTTGCATCGCGATGATTA
CATTAACCATCGCTATCACGCCGAAATTGGCCAGTGGGATGATGTACGGG
ATATGGAGCGCGAGTCTGCCGTTGGTCTCTTTGTAGCTGGCTGTCGCGTC
ACCCGGGAGAATGGTGGAACGCAGTTTATTCCTCGCAGCCATCTCTGGTG
GGTGGAATGACTCCTGACTACCAATGCGTTTAGTCATGTCTGATAGACAA
AGCAGGGGCACAGATCGCACTACACCTCCAAAGGTCGAGCAATGTATTTT
CGCTGATATGGAAAAAGGCGATGGCTTCATCATGCTGGCGTCGGCATTCC
ATGGAGGGGGCTCGAACATCACCAAAGACGAGTACAGGCTAGTCTTCGCC
ACGTTCGTTGTTCGAGGCTACCTGCGCCAGGAAGAGAACCAGTTCCTGGC
GGTGCCGGCGGATGTCGCGCGCAGGTATGACCGGGAGACTTTGGATTTTA
TGGGCTATGCCATGAGCGAGCCAGCTTGTGGTTACGTGGAGCAGATGGAT
CCCATCTATCATCTTTGCCCGGAGCTCAAGGAAAATGAGCGGCCGCGGGA
CTTTTAGTGGGGAATCCTGAGGTAAACCTGTCCATAGTGTATGCTGTCAT
CATCCTTACCATATTGGCCTGTACAAGTCCATGTTGTAGACTGAATCTAA
GGCATCTGCAATATTTTA back to topCoding sequence (CDS) from alignment at ch4:6162064..6163331+ >KJC3_006606-T1 ID=KJC3_006606-T1|Name=KJC3_006606-T1|organism=Aspergillus niger KJC3|type=CDS|length=2889bp|location=Sequence derived from alignment at ch4:6162064..6163331+ (Aspergillus niger KJC3)
ATGTCTTGTATTGTTCACCACATGGCTACCATGCCGTTCAATCCCAGCAA
GTACAGCGACGAAGTTCAGAAAGTGTCCAAGGACACCCCTCTGGAGGAAA
TCATCTATCTACTTAAACGAGATGGGGGCGTATTCGTGAAGGGTCTCATT
TCAGAAGCAGACGTCGACCAAGCTCACCAAGAAGCCAAACCTCGTTTGGA
CGCAGACGTGGAATGGAATGGCTCCTTCTTTCCGGCACAAACTCAACGCG
CACCGTCTCTGATCGCGCACAGCCCGACCTATACCAAAACTCAAGTCATG
AATCCGCTGTTTCGTCAAGTCTGCGACCATTTTCTAACCTCCCGACGATG
GTACTGGTGGGGAGAAGAGAAGAAGATGTCTTTGTCTAAGCCGTACGTGC
ACTCCTGCACGGCCATGAGGATCGGCCCCGGCGCCAAGGCGCAGCCCTTG
CATCGCGATGATTACATTAACCATCGCTATCACGCCGAAATTGGCCAGTG
GGATGATGTACGGGATATGGAGCGCGAGTCTGCCGTTGGTCTCTTTGTAG
CTGGCTGTCGCGTCACCCGGGAGAATGGTGGAACGCAGTTTATTCCTCGC
AGCCATCTCTGGGGCACAGATCGCACTACACCTCCAAAGGTCGAGCAATG
TATTTTCGCTGATATGGAAAAAGGCGATGGCTTCATCATGCTGGCGTCGG
CATTCCATGGAGGGGGCTCGAACATCACCAAAGACGAGTACAGGCTAGTC
TTCGCCACGTTCGTTGTTCGAGGCTACCTGCGCCAGGAAGAGAACCAGTT
CCTGGCGGTGCCGGCGGATGTCGCGCGCAGGTATGACCGGGAGACTTTGG
ATTTTATGGGCTATGCCATGAGCGAGCCAGCTTGTGGTTACGTGGAGCAG
ATGGATCCCATCTATCATCTTTGCCCGGAGCTCAAGGAAAATGAGCGGCC
GCGGGACTTTTAGATGTCTTGTATTGTTCACCACATGGCTACCATGCCGT
TCAATCCCAGCAAGTACAGCGACGAAGTTCAGAAAGTGTCCAAGGACACC
CCTCTGGAGGAAATCATCTATCTACTTAAACGAGATGGGGGCGTATTCGT
GAAGGGTCTCATTTCAGAAGCAGACGTCGACCAAGCTCACCAAGAAGCCA
AACCTCGTTTGGACGCAGACGTGGAATGGAATGGCTCCTTCTTTCCGGCA
CAAACTCAACGCGCACCGTCTCTGATCGCGCACAGCCCGACCTATACCAA
AACTCAAGTCATGAATCCGCTGTTTCGTCAAGTCTGCGACCATTTTCTAA
CCTCCCGACGATGGTACTGGTGGGGAGAAGAGAAGAAGATGTCTTTGTCT
AAGCCGTACGTGCACTCCTGCACGGCCATGAGGATCGGCCCCGGCGCCAA
GGCGCAGCCCTTGCATCGCGATGATTACATTAACCATCGCTATCACGCCG
AAATTGGCCAGTGGGATGATGTACGGGATATGGAGCGCGAGTCTGCCGTT
GGTCTCTTTGTAGCTGGCTGTCGCGTCACCCGGGAGAATGGTGGAACGCA
GTTTATTCCTCGCAGCCATCTCTGGGGCACAGATCGCACTACACCTCCAA
AGGTCGAGCAATGTATTTTCGCTGATATGGAAAAAGGCGATGGCTTCATC
ATGCTGGCGTCGGCATTCCATGGAGGGGGCTCGAACATCACCAAAGACGA
GTACAGGCTAGTCTTCGCCACGTTCGTTGTTCGAGGCTACCTGCGCCAGG
AAGAGAACCAGTTCCTGGCGGTGCCGGCGGATGTCGCGCGCAGGTATGAC
CGGGAGACTTTGGATTTTATGGGCTATGCCATGAGCGAGCCAGCTTGTGG
TTACGTGGAGCAGATGGATCCCATCTATCATCTTTGCCCGGAGCTCAAGG
AAAATGAGCGGCCGCGGGACTTTTAGATGTCTTGTATTGTTCACCACATG
GCTACCATGCCGTTCAATCCCAGCAAGTACAGCGACGAAGTTCAGAAAGT
GTCCAAGGACACCCCTCTGGAGGAAATCATCTATCTACTTAAACGAGATG
GGGGCGTATTCGTGAAGGGTCTCATTTCAGAAGCAGACGTCGACCAAGCT
CACCAAGAAGCCAAACCTCGTTTGGACGCAGACGTGGAATGGAATGGCTC
CTTCTTTCCGGCACAAACTCAACGCGCACCGTCTCTGATCGCGCACAGCC
CGACCTATACCAAAACTCAAGTCATGAATCCGCTGTTTCGTCAAGTCTGC
GACCATTTTCTAACCTCCCGACGATGGTACTGGTGGGGAGAAGAGAAGAA
GATGTCTTTGTCTAAGCCGTACGTGCACTCCTGCACGGCCATGAGGATCG
GCCCCGGCGCCAAGGCGCAGCCCTTGCATCGCGATGATTACATTAACCAT
CGCTATCACGCCGAAATTGGCCAGTGGGATGATGTACGGGATATGGAGCG
CGAGTCTGCCGTTGGTCTCTTTGTAGCTGGCTGTCGCGTCACCCGGGAGA
ATGGTGGAACGCAGTTTATTCCTCGCAGCCATCTCTGGGGCACAGATCGC
ACTACACCTCCAAAGGTCGAGCAATGTATTTTCGCTGATATGGAAAAAGG
CGATGGCTTCATCATGCTGGCGTCGGCATTCCATGGAGGGGGCTCGAACA
TCACCAAAGACGAGTACAGGCTAGTCTTCGCCACGTTCGTTGTTCGAGGC
TACCTGCGCCAGGAAGAGAACCAGTTCCTGGCGGTGCCGGCGGATGTCGC
GCGCAGGTATGACCGGGAGACTTTGGATTTTATGGGCTATGCCATGAGCG
AGCCAGCTTGTGGTTACGTGGAGCAGATGGATCCCATCTATCATCTTTGC
CCGGAGCTCAAGGAAAATGAGCGGCCGCGGGACTTTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006606-T1.utr5p1 | KJC3_006606-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006606-T1.utr3p1 | KJC3_006606-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.14 |
| DBxref | InterPro:IPR008775 |
| DBxref | PFAM:PF05721 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:6162064..6163331 + |
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