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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:6203456..6204742- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006623-T1 ID=KJC3_006623-T1|Name=KJC3_006623-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1287bp|location=Sequence derived from alignment at ch4:6203456..6204742- (Aspergillus niger KJC3)
GAAAGTTGGCTACTTGAATGTTACTCCCTCATTGCTTTCAAATCATGGCT
CCCGTACGGTCTGTTCCGTCATCCTTCTATCCCACACCATCTGTCGATAT
GTCCGCTGATGAACAACACCCCAGATTTCGCCATGACCCCAGCTGGTCCT
ATCACCAAGGAGTGTCGGGTTCGATGCTCAAAGCTTTCCTCCGTACTTTT
ACTGCGTTGCACATGAAATGGCCGCTATCCCTCAAGCCACACCATGAGTC
GGATCGATTCGTGTTGATCAATCCTGCCGCCTCCGAGTGCTACACTGGAG
TGATGGTGGATGAGGCCGTCAAGCCGGAGACCATCGGCGCCACCTGGTAT
CCCCAGCCATTTACTCGCGGCACATCTCTCCCGGATGATGGGCATGTCAT
CTTGCACCTGCACGGTGGTTCCTATATCCTGGGAGACGGTCGCTCCTCTT
CCTGCAACTTCATGGCCCAGACCCTCCTCGAACAGACCCCAGCAAGTTAC
ATGCTCTGTCCCCAGTATCGACTGGCCTGCAACCACAACGGACGCTTTCC
CGCTCAATTGCAGGATGCCCTCGCAGCATATATGCATCTGATTCACACTC
TCCAAATCCCTCCTTCTCGAATCGTGCTCAGCGGCGACAGCTCCGGTGGC
CACCTCGTCCTAGCACTTCTCCGGTACATCGTCGAATTTAATCGGCCGGA
TCTTTTACCAGCACCGAAATGCAGCTGGGCCTGGTCTCCCTGGTGTGACG
TACCCGCTGCAGTCGACCCTAGTGCCTGGACGCACAGCACCAACTACAAA
ACCGAGTATATACCGGGGTCCTTCCCAGCCTGGGGAGCGAAGCAGTTCCT
TGGCGATTTGGAGATAACCCCAAAAGTCGAGCCATACGTAGCTCCCATCT
GGCATCCGTTTGTTGTTCCCTCGCCAGTACTGGTCATTACCGGCGGTCGT
GAAGTTCTGTGTCAGGATCATGAGAAGCTGGTGCAGGAGTTTCAGAAACT
GCCCGGGAATGAATCTTCCATTGATCTGGTAGTGGAGGAAAAGGTGCCGC
ATGATGTGTTAATGATTGGGTGGATTATGGGGTTCAAGGATGAGGCCCGT
CATTGCGCCACCAAGGCTGGGGAATTTCTACGTCAGGTGGACGCTTCGTC
CGGTAGAAAGGATGGTGCTCCTGAGATGTGAATGGGCTGAATTCCTCATT
GTATATATAGATGCTATGTTTCGGTTGGTCCCTGCCGGGTGCGTGGACTT
TGCCTGCATTCCATTATTGATGAATTATTCACTGGCG back to topCoding sequence (CDS) from alignment at ch4:6203456..6204742- >KJC3_006623-T1 ID=KJC3_006623-T1|Name=KJC3_006623-T1|organism=Aspergillus niger KJC3|type=CDS|length=2196bp|location=Sequence derived from alignment at ch4:6203456..6204742- (Aspergillus niger KJC3)
ATTTCGCCATGACCCCAGCTGGTCCTATCACCAAGGAGTGTCGGGTTCGA
TGCTCAAAGCTTTCCTCCGTACTTTTACTGCGTTGCACATGAAATGGCCG
CTATCCCTCAAGCCACACCATGAGTCGGATCGATTCGTGTTGATCAATCC
TGCCGCCTCCGAGTGCTACACTGGAGTGATGGTGGATGAGGCCGTCAAGC
CGGAGACCATCGGCGCCACCTGGTATCCCCAGCCATTTACTCGCGGCACA
TCTCTCCCGGATGATGGGCATGTCATCTTGCACCTGCACGGTGGTTCCTA
TATCCTGGGAGACGGTCGCTCCTCTTCCTGCAACTTCATGGCCCAGACCC
TCCTCGAACAGACCCCAGCAAGTTACATGCTCTGTCCCCAGTATCGACTG
GCCTGCAACCACAACGGACGCTTTCCCGCTCAATTGCAGGATGCCCTCGC
AGCATATATGCATCTGATTCACACTCTCCAAATCCCTCCTTCTCGAATCG
TGCTCAGCGGCGACAGCTCCGGTGGCCACCTCGTCCTAGCACTTCTCCGG
TACATCGTCGAATTTAATCGGCCGGATCTTTTACCAGCACCGAAATGCAG
CTGGGCCTGGTCTCCCTGGTGTGACGTACCCGCTGCAGTCGACCCTAGTG
CCTGGACGCACAGCACCAACTACAAAACCGAGTATATACCGGGGTCCTTC
CCAGCCTGGGGAGCGAAGCAGTTCCTTGGCGATTTGGAGATAACCCCAAA
AGTCGAGCCATACGTAGCTCCCATCTGGCATCCGTTTGTTGTTCCCTCGC
CAGTACTGGTCATTACCGGCGGTCGTGAAGTTCTGTGTCAGGATCATGAG
AAGCTGGTGCAGGAGTTTCAGAAACTGCCCGGGAATGAATCTTCCATTGA
TCTGGTAGTGGAGGAAAAGGTGCCGCATGATGTGTTAATGATTGGGTGGA
TTATGGGGTTCAAGGATGAGGCCCGTCATTGCGCCACCAAGGCTGGGGAA
TTTCTACGTCAGGTGGACGCTTCGTCCGGTAGAAAGGATGGTGCTCCTGA
GATGTGAATGTTACTCCCTCATTGCTTTCAAATCATGGCTCCCGTACGAT
TTCGCCATGACCCCAGCTGGTCCTATCACCAAGGAGTGTCGGGTTCGATG
CTCAAAGCTTTCCTCCGTACTTTTACTGCGTTGCACATGAAATGGCCGCT
ATCCCTCAAGCCACACCATGAGTCGGATCGATTCGTGTTGATCAATCCTG
CCGCCTCCGAGTGCTACACTGGAGTGATGGTGGATGAGGCCGTCAAGCCG
GAGACCATCGGCGCCACCTGGTATCCCCAGCCATTTACTCGCGGCACATC
TCTCCCGGATGATGGGCATGTCATCTTGCACCTGCACGGTGGTTCCTATA
TCCTGGGAGACGGTCGCTCCTCTTCCTGCAACTTCATGGCCCAGACCCTC
CTCGAACAGACCCCAGCAAGTTACATGCTCTGTCCCCAGTATCGACTGGC
CTGCAACCACAACGGACGCTTTCCCGCTCAATTGCAGGATGCCCTCGCAG
CATATATGCATCTGATTCACACTCTCCAAATCCCTCCTTCTCGAATCGTG
CTCAGCGGCGACAGCTCCGGTGGCCACCTCGTCCTAGCACTTCTCCGGTA
CATCGTCGAATTTAATCGGCCGGATCTTTTACCAGCACCGAAATGCAGCT
GGGCCTGGTCTCCCTGGTGTGACGTACCCGCTGCAGTCGACCCTAGTGCC
TGGACGCACAGCACCAACTACAAAACCGAGTATATACCGGGGTCCTTCCC
AGCCTGGGGAGCGAAGCAGTTCCTTGGCGATTTGGAGATAACCCCAAAAG
TCGAGCCATACGTAGCTCCCATCTGGCATCCGTTTGTTGTTCCCTCGCCA
GTACTGGTCATTACCGGCGGTCGTGAAGTTCTGTGTCAGGATCATGAGAA
GCTGGTGCAGGAGTTTCAGAAACTGCCCGGGAATGAATCTTCCATTGATC
TGGTAGTGGAGGAAAAGGTGCCGCATGATGTGTTAATGATTGGGTGGATT
ATGGGGTTCAAGGATGAGGCCCGTCATTGCGCCACCAAGGCTGGGGAATT
TCTACGTCAGGTGGACGCTTCGTCCGGTAGAAAGGATGGTGCTCCTGAGA
TGTGAATGTTACTCCCTCATTGCTTTCAAATCATGGCTCCCGTACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006623-T1.utr3p1 | KJC3_006623-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006623-T1.utr5p1 | KJC3_006623-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | CAZy:CE10 |
| DBxref | InterPro:IPR033140 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR013094 |
| DBxref | PFAM:PF10340 |
| DBxref | PFAM:PF07859 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:6203456..6204742 - |
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