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KJC3_006624-T1, KJC3_006624-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006624-T1
Unique NameKJC3_006624-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:6205493..6207037-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006624-T1 ID=KJC3_006624-T1|Name=KJC3_006624-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1545bp|location=Sequence derived from alignment at ch4:6205493..6207037- (Aspergillus niger KJC3)
ATGTTGTCCCTAAGAGGAAAGCCCCTGGTCTATCTGGTCACCGTCGTCAG
CTCGACTGGCTTCTGCCTGTTCGGCTACGATAATGGCCTGATGGGCCAGG
TCATCTCAGAGCCCAACTTCCTCAACATGATCGGAAATCCAGACGCAGCC
GTGCAAGGGCTTGCAGTATCATCCTACGACATCGGATGCATGGTAGGGGC
GTTGGCTGCCGTGCTTATTAGTGAGCAGATCGGGAGAAGACGGACGATCT
TACTAGCTTGTGTTGTGCACATTGTGGGAGACGTCGTCAACGCCTCCACC
TTCTCCCTCGCCCAACTTTTGGTGTCGCGTATCATCCTTGGTATCGGTCT
GGGGCTCTTTACGAGTGCCTCTCCCGTCTGGCTGGCCGAGACTGCTACAG
CGCAGATGCGGGCTGTTATGGTGGCCGTGCAGCTGACCTTCCTCATTATC
GGCACGAACATTGCCTACTGGGTCGATTATGGGCTTGGCTTCCTTGACAA
TGAAATCAGCTGGCGTGTACCTTTTGCATTGCAGGCCATCTACCCCATTG
TGGCCTTCGGGTTTACTTTGGTGCTCCCCGAATCCCCTCGATGGCTTGCT
TCCCACGGCCATACTGAGGCTGCCGCCGCCGCTCTATCGGCCTTCCGCGA
TCTGCCAGAGGACCACGAGTTGGTCCAAGCTGAATTGCAGGATATTGCTT
CGGCAATCGCTTTGGAATCGGACGGTGGATCCTGGGGAAGCTTGTTCCGC
CAAGGCCCCAGTAAGGTGCGGACGCGTGTTATTATCGCCTGCGCGGCCAA
CTCGATGCAATCCTACACCGGGATCAACTTTGTGGAGTACTACTTCCCTT
TCATCTTGACCAATTCGGTCGGACTCGGTACCAATCTTGCGAACCTTGTG
TCGGGGTGCTCACAGATCTGGTTCCTCCTATCATCCTTCGTGACGTGGTA
CTATATCAACAAGCTGGGCCGTCGCCGACTGTTCTGCCTGGGTAATCTCG
GGATGGGGTGCTGCATGATTGCGGTGTGTATCACTCTGTGGAAAGATAGT
CAAGTTTCGGTCATCATCACCGTCGTCTTCTTCTTCCTTTATCTCTCGTT
TTTCACTTGGGGATGGATGTCGAACATGTGGACCTATCCTGCGGAGATCC
TACCACTCCATGTCCGCAGTAAAGCGCTGGCACTGTCCGTCTTCTTCCAA
TGGGCAAATCAGTTCTGGACGGTGGAAATTGCGCCCGTCACGATTGACAA
CATCGGCTGGCGAACATATATCATCTGGGCCATTCTTAACTTCGTTTGCT
GCGTGATTGTGTATTTATTTTTTCCGGAAACATCGTCCCTCACGCTCGAG
TCAGTCGATTTCCTATTTTCCTCGTCTAACAACATCCGCGAGGTGGTGGC
GCGCAGCGAGGAGATCTATTTGAATCACTCCCATCTTGATGTTGGAGCTG
CGGCGGCGGCGGCGGTGGGCGCAGACGGCAAGGAAAAGGCCTTGGAAGAC
GGGGTCGCACAAGTGACGCACGTCGAGAGACACATGGGGGTGTAG
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Coding sequence (CDS) from alignment at ch4:6205493..6207037-

>KJC3_006624-T1 ID=KJC3_006624-T1|Name=KJC3_006624-T1|organism=Aspergillus niger KJC3|type=CDS|length=1545bp|location=Sequence derived from alignment at ch4:6205493..6207037- (Aspergillus niger KJC3)
ATGTTGTCCCTAAGAGGAAAGCCCCTGGTCTATCTGGTCACCGTCGTCAG
CTCGACTGGCTTCTGCCTGTTCGGCTACGATAATGGCCTGATGGGCCAGG
TCATCTCAGAGCCCAACTTCCTCAACATGATCGGAAATCCAGACGCAGCC
GTGCAAGGGCTTGCAGTATCATCCTACGACATCGGATGCATGGTAGGGGC
GTTGGCTGCCGTGCTTATTAGTGAGCAGATCGGGAGAAGACGGACGATCT
TACTAGCTTGTGTTGTGCACATTGTGGGAGACGTCGTCAACGCCTCCACC
TTCTCCCTCGCCCAACTTTTGGTGTCGCGTATCATCCTTGGTATCGGTCT
GGGGCTCTTTACGAGTGCCTCTCCCGTCTGGCTGGCCGAGACTGCTACAG
CGCAGATGCGGGCTGTTATGGTGGCCGTGCAGCTGACCTTCCTCATTATC
GGCACGAACATTGCCTACTGGGTCGATTATGGGCTTGGCTTCCTTGACAA
TGAAATCAGCTGGCGTGTACCTTTTGCATTGCAGGCCATCTACCCCATTG
TGGCCTTCGGGTTTACTTTGGTGCTCCCCGAATCCCCTCGATGGCTTGCT
TCCCACGGCCATACTGAGGCTGCCGCCGCCGCTCTATCGGCCTTCCGCGA
TCTGCCAGAGGACCACGAGTTGGTCCAAGCTGAATTGCAGGATATTGCTT
CGGCAATCGCTTTGGAATCGGACGGTGGATCCTGGGGAAGCTTGTTCCGC
CAAGGCCCCAGTAAGGTGCGGACGCGTGTTATTATCGCCTGCGCGGCCAA
CTCGATGCAATCCTACACCGGGATCAACTTTGTGGAGTACTACTTCCCTT
TCATCTTGACCAATTCGGTCGGACTCGGTACCAATCTTGCGAACCTTGTG
TCGGGGTGCTCACAGATCTGGTTCCTCCTATCATCCTTCGTGACGTGGTA
CTATATCAACAAGCTGGGCCGTCGCCGACTGTTCTGCCTGGGTAATCTCG
GGATGGGGTGCTGCATGATTGCGGTGTGTATCACTCTGTGGAAAGATAGT
CAAGTTTCGGTCATCATCACCGTCGTCTTCTTCTTCCTTTATCTCTCGTT
TTTCACTTGGGGATGGATGTCGAACATGTGGACCTATCCTGCGGAGATCC
TACCACTCCATGTCCGCAGTAAAGCGCTGGCACTGTCCGTCTTCTTCCAA
TGGGCAAATCAGTTCTGGACGGTGGAAATTGCGCCCGTCACGATTGACAA
CATCGGCTGGCGAACATATATCATCTGGGCCATTCTTAACTTCGTTTGCT
GCGTGATTGTGTATTTATTTTTTCCGGAAACATCGTCCCTCACGCTCGAG
TCAGTCGATTTCCTATTTTCCTCGTCTAACAACATCCGCGAGGTGGTGGC
GCGCAGCGAGGAGATCTATTTGAATCACTCCCATCTTGATGTTGGAGCTG
CGGCGGCGGCGGCGGTGGGCGCAGACGGCAAGGAAAAGGCCTTGGAAGAC
GGGGTCGCACAAGTGACGCACGTCGAGAGACACATGGGGGTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006624KJC3_006624Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006624-T1.cdsKJC3_006624-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006624-T1.exon1KJC3_006624-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006624-T1KJC3_006624-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:6205493..6207037 -
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