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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:6213609..6216153+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006629-T1 ID=KJC3_006629-T1|Name=KJC3_006629-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2545bp|location=Sequence derived from alignment at ch4:6213609..6216153+ (Aspergillus niger KJC3)
TGCGTGCCAGAGATAATCCACATCAGCGGGAGAATGATCCAGTCCACCTT
GCGCACCAGCCGGCGGTACTGGGCCGGTGTGTATTCGGCCTCACTGGCGT
GGACCAGATCGGCCACCAGGCCAGCCTGCTTTTCATCTCCAACCGGCAGA
GGGTCCGGCGACCTCTCGGCCAACGCTATCTCCATTTTCTCAGACGCCAT
GTATATGAACTGCTGAACCCGTCACTTGTGCTTTTGGTGTCGTGCTAGCT
GCAGGCTGCCCGTATTTATCGGCCGCGTCTATCTCTGGCCATGAGATGAT
TTTCTGGTCTGTCCGCCACTTCGGATCTCGGGCCGTGGCCGATAAGAAAA
GAAGAGACAAGTGTCGTCCAGCTTGACGATCCTCCTCGTTCTGTGCCTGT
TATTTCTTGTTCATTTTCCTATCGTTCTTCGCTTCCTCCCTCTATTTGTC
CATTTCACATTTATCTGTCTACTAACCGCCACAGATACCATGGCCCAATC
CCAATTCACGAATGGGCTCCCCACAGCTGTTGACTTGGGCCACCATATCA
ATTCGAAATCCCGGGCCCGACACCCAAGCCCTTTGAAGGACATTATCCAG
TTCATGGCCGTTGATGACATGGTCAGCTTGGCCGGAGGTATGTTAAATGC
GGAGATGAATATTTCTAGCTTTGCGTCTCCATCGGACTGTATCTTCCCGA
GTTCATTTCTCTGCTACTTGGTTTGCAGTAATTATGCACGGCCCATCCTT
GTCCTTTCACCTTTTAGCTGTTTGAATATTTGAACCCTTTCCCTGCTTTG
TCTGTCCGTGGTTTATTCTACGATTGAGCCAACAAGCACGCCAAAAACAT
AAACTTTATAAACACAAGGTTATTGTTTTGATGCAGTCAGGGCCAATGCT
TTGAGTCGTTAGGGCGAATAGCAAGAAGATATACACCTTCTAACACATGT
TTTCAGGCCTTCCACATCCTTCTTTCTTCCCATTTAGGACAGTCATCGTG
ACAGCATCACCCCCAACAGCGGAGGAAAGTCCCTGCTTGCTCGAACTACC
CCTAGATGGCTTCTTGCAGTATGGGTCGGGAACAGGCAACGCACAACTGC
GCGCCTGGTGCCGGGAGTTTACCCAGCGGGTGCATCGACCAGCCTATGCC
GACTGGACCGTGTTACTTCACCCCGGAAATACCAACGCATGGAGTAAAGT
GGTCAGCTTGTTGTGTGAGACAGACGACTACATATTGTGTGAGACTTACA
CCTATCCATCAGCACAGGCCTTCTGGATCCCTCTGGGCATCAAAGCGGCC
CCGGTTGCTTCAGATGCAGAAGGCATGCGTGCTGATACTCTCGCTCAAAC
ATTGCGCGATTGGGAAGATACTCACCCCGGCACCCGGCGGCCGCGTGTGC
TGTATCTTGTCAGTGTCGGCTCTAACCCATCGGGCGTCACGATGAGTACA
AAGCGACGACGAGATGTTTACGATGTGTGTATTGAATACGGTGCGCCATC
CCACCTTCACTAATGGCTCGTCGACCTGCGCTGACAGTAGGGCAGATGTC
ATCATTGTGGAGGACGATCCGTACTTCTTCCTCCAGTACCCGGAATACAA
TGCCGGTGACTCGGTCACGGAAGGCCCAGAATTCGTCCCCAGCGATGAGT
TCCTAAGGTCCTTGACACCGTCAATGCTCCAATTTGACCACCAGGGCCGT
GTAATCCGGCTGGAGTCTTTTAGTAAAACGCTGGCACCGGGTCTGCGGCT
CGGTTACTTTGTCGCAAATCCATTGTTTACCGAACGACTGCTGCGTGCGA
CCGAGGTTGAGACGCAGGACCCATCTGGCCTATCACAAGCACTTACCCTC
CGCCTCATGCAAAGCTGGGGTATCGACGGCTATCTTGGATGGCTGCAAGG
GCTGGGCGTTGAATACTGTCGCCGACGCGACTGGATGATAGACGCCTTTT
CGCAGCATTTTCGCGTCGGTTACGCGGCGAAGGCAAGCGGAACCCTTGTC
GCCCATCTCGGCGACGTCCCTATTTTCTCCTTTGTACCACCCACAGGGGG
TATGTTTATATGGGCATGCTTTAATCTGGCCCAGAATCCTGCCTTCGAGC
AGCTACGGCATGATGAGAACGTGGTTGATCCGGAGCAGGTCATGGCCGAC
CGGCTTTGGCGGCAGTTCGCCGAGGCCAAGGTAAGTAGTTCACACGTCGT
TTCGCTGAATATGCAGAGGACACACTGACACCCGCTTACAGGTTCTCTTA
ACCCCGGGGTCATATTATCATCCCTGGCAGGGGCCGGACAAGGTTACAAC
AAATGCGCGCGGAGCTACACCCTTGACGACCTACTTTCGGTTTTCCTTCT
CCATGACGACGGTATATGCGAGCCCTGAAAAGACGGTCTGATTAAATGAG
CTAACCATTGTGCAGCAAGAGGAGATGGAACGTGGTATTGCACGAATGGC
TCAAGTGATACGGGCGTCGTGGAAGCTGGAGCAGTAGGTTAGATCCGTCT
TAGTAGGGTAGACGATACGATGTACTCTGTCAATACTTAGTCCAG back to topCoding sequence (CDS) from alignment at ch4:6213609..6216153+ >KJC3_006629-T1 ID=KJC3_006629-T1|Name=KJC3_006629-T1|organism=Aspergillus niger KJC3|type=CDS|length=7545bp|location=Sequence derived from alignment at ch4:6213609..6216153+ (Aspergillus niger KJC3)
ATGGCCCAATCCCAATTCACGAATGGGCTCCCCACAGCTGTTGACTTGGG
CCACCATATCAATTCGAAATCCCGGGCCCGACACCCAAGCCCTTTGAAGG
ACATTATCCAGTTCATGGCCGTTGATGACATGGTCAGCTTGGCCGGAGGC
CTTCCACATCCTTCTTTCTTCCCATTTAGGACAGTCATCGTGACAGCATC
ACCCCCAACAGCGGAGGAAAGTCCCTGCTTGCTCGAACTACCCCTAGATG
GCTTCTTGCAGTATGGGTCGGGAACAGGCAACGCACAACTGCGCGCCTGG
TGCCGGGAGTTTACCCAGCGGGTGCATCGACCAGCCTATGCCGACTGGAC
CGTGTTACTTCACCCCGGAAATACCAACGCATGGAGTAAAGTGGTCAGCT
TGTTGTGTGAGACAGACGACTACATATTGTGTGAGACTTACACCTATCCA
TCAGCACAGGCCTTCTGGATCCCTCTGGGCATCAAAGCGGCCCCGGTTGC
TTCAGATGCAGAAGGCATGCGTGCTGATACTCTCGCTCAAACATTGCGCG
ATTGGGAAGATACTCACCCCGGCACCCGGCGGCCGCGTGTGCTGTATCTT
GTCAGTGTCGGCTCTAACCCATCGGGCGTCACGATGAGTACAAAGCGACG
ACGAGATGTTTACGATGTGTGTATTGAATACGATGTCATCATTGTGGAGG
ACGATCCGTACTTCTTCCTCCAGTACCCGGAATACAATGCCGGTGACTCG
GTCACGGAAGGCCCAGAATTCGTCCCCAGCGATGAGTTCCTAAGGTCCTT
GACACCGTCAATGCTCCAATTTGACCACCAGGGCCGTGTAATCCGGCTGG
AGTCTTTTAGTAAAACGCTGGCACCGGGTCTGCGGCTCGGTTACTTTGTC
GCAAATCCATTGTTTACCGAACGACTGCTGCGTGCGACCGAGGTTGAGAC
GCAGGACCCATCTGGCCTATCACAAGCACTTACCCTCCGCCTCATGCAAA
GCTGGGGTATCGACGGCTATCTTGGATGGCTGCAAGGGCTGGGCGTTGAA
TACTGTCGCCGACGCGACTGGATGATAGACGCCTTTTCGCAGCATTTTCG
CGTCGGTTACGCGGCGAAGGCAAGCGGAACCCTTGTCGCCCATCTCGGCG
ACGTCCCTATTTTCTCCTTTGTACCACCCACAGGGGGTATGTTTATATGG
GCATGCTTTAATCTGGCCCAGAATCCTGCCTTCGAGCAGCTACGGCATGA
TGAGAACGTGGTTGATCCGGAGCAGGTCATGGCCGACCGGCTTTGGCGGC
AGTTCGCCGAGGCCAAGGTTCTCTTAACCCCGGGGTCATATTATCATCCC
TGGCAGGGGCCGGACAAGGTTACAACAAATGCGCGCGGAGCTACACCCTT
GACGACCTACTTTCGGTTTTCCTTCTCCATGACGACGCAAGAGGAGATGG
AACGTGGTATTGCACGAATGGCTCAAGTGATACGGGCGTCGTGGAAGCTG
GAGCAGTAGATGGCCCAATCCCAATTCACGAATGGGCTCCCCACAGCTGT
TGACTTGGGCCACCATATCAATTCGAAATCCCGGGCCCGACACCCAAGCC
CTTTGAAGGACATTATCCAGTTCATGGCCGTTGATGACATGGTCAGCTTG
GCCGGAGGCCTTCCACATCCTTCTTTCTTCCCATTTAGGACAGTCATCGT
GACAGCATCACCCCCAACAGCGGAGGAAAGTCCCTGCTTGCTCGAACTAC
CCCTAGATGGCTTCTTGCAGTATGGGTCGGGAACAGGCAACGCACAACTG
CGCGCCTGGTGCCGGGAGTTTACCCAGCGGGTGCATCGACCAGCCTATGC
CGACTGGACCGTGTTACTTCACCCCGGAAATACCAACGCATGGAGTAAAG
TGGTCAGCTTGTTGTGTGAGACAGACGACTACATATTGTGTGAGACTTAC
ACCTATCCATCAGCACAGGCCTTCTGGATCCCTCTGGGCATCAAAGCGGC
CCCGGTTGCTTCAGATGCAGAAGGCATGCGTGCTGATACTCTCGCTCAAA
CATTGCGCGATTGGGAAGATACTCACCCCGGCACCCGGCGGCCGCGTGTG
CTGTATCTTGTCAGTGTCGGCTCTAACCCATCGGGCGTCACGATGAGTAC
AAAGCGACGACGAGATGTTTACGATGTGTGTATTGAATACGATGTCATCA
TTGTGGAGGACGATCCGTACTTCTTCCTCCAGTACCCGGAATACAATGCC
GGTGACTCGGTCACGGAAGGCCCAGAATTCGTCCCCAGCGATGAGTTCCT
AAGGTCCTTGACACCGTCAATGCTCCAATTTGACCACCAGGGCCGTGTAA
TCCGGCTGGAGTCTTTTAGTAAAACGCTGGCACCGGGTCTGCGGCTCGGT
TACTTTGTCGCAAATCCATTGTTTACCGAACGACTGCTGCGTGCGACCGA
GGTTGAGACGCAGGACCCATCTGGCCTATCACAAGCACTTACCCTCCGCC
TCATGCAAAGCTGGGGTATCGACGGCTATCTTGGATGGCTGCAAGGGCTG
GGCGTTGAATACTGTCGCCGACGCGACTGGATGATAGACGCCTTTTCGCA
GCATTTTCGCGTCGGTTACGCGGCGAAGGCAAGCGGAACCCTTGTCGCCC
ATCTCGGCGACGTCCCTATTTTCTCCTTTGTACCACCCACAGGGGGTATG
TTTATATGGGCATGCTTTAATCTGGCCCAGAATCCTGCCTTCGAGCAGCT
ACGGCATGATGAGAACGTGGTTGATCCGGAGCAGGTCATGGCCGACCGGC
TTTGGCGGCAGTTCGCCGAGGCCAAGGTTCTCTTAACCCCGGGGTCATAT
TATCATCCCTGGCAGGGGCCGGACAAGGTTACAACAAATGCGCGCGGAGC
TACACCCTTGACGACCTACTTTCGGTTTTCCTTCTCCATGACGACGCAAG
AGGAGATGGAACGTGGTATTGCACGAATGGCTCAAGTGATACGGGCGTCG
TGGAAGCTGGAGCAGTAGATGGCCCAATCCCAATTCACGAATGGGCTCCC
CACAGCTGTTGACTTGGGCCACCATATCAATTCGAAATCCCGGGCCCGAC
ACCCAAGCCCTTTGAAGGACATTATCCAGTTCATGGCCGTTGATGACATG
GTCAGCTTGGCCGGAGGCCTTCCACATCCTTCTTTCTTCCCATTTAGGAC
AGTCATCGTGACAGCATCACCCCCAACAGCGGAGGAAAGTCCCTGCTTGC
TCGAACTACCCCTAGATGGCTTCTTGCAGTATGGGTCGGGAACAGGCAAC
GCACAACTGCGCGCCTGGTGCCGGGAGTTTACCCAGCGGGTGCATCGACC
AGCCTATGCCGACTGGACCGTGTTACTTCACCCCGGAAATACCAACGCAT
GGAGTAAAGTGGTCAGCTTGTTGTGTGAGACAGACGACTACATATTGTGT
GAGACTTACACCTATCCATCAGCACAGGCCTTCTGGATCCCTCTGGGCAT
CAAAGCGGCCCCGGTTGCTTCAGATGCAGAAGGCATGCGTGCTGATACTC
TCGCTCAAACATTGCGCGATTGGGAAGATACTCACCCCGGCACCCGGCGG
CCGCGTGTGCTGTATCTTGTCAGTGTCGGCTCTAACCCATCGGGCGTCAC
GATGAGTACAAAGCGACGACGAGATGTTTACGATGTGTGTATTGAATACG
ATGTCATCATTGTGGAGGACGATCCGTACTTCTTCCTCCAGTACCCGGAA
TACAATGCCGGTGACTCGGTCACGGAAGGCCCAGAATTCGTCCCCAGCGA
TGAGTTCCTAAGGTCCTTGACACCGTCAATGCTCCAATTTGACCACCAGG
GCCGTGTAATCCGGCTGGAGTCTTTTAGTAAAACGCTGGCACCGGGTCTG
CGGCTCGGTTACTTTGTCGCAAATCCATTGTTTACCGAACGACTGCTGCG
TGCGACCGAGGTTGAGACGCAGGACCCATCTGGCCTATCACAAGCACTTA
CCCTCCGCCTCATGCAAAGCTGGGGTATCGACGGCTATCTTGGATGGCTG
CAAGGGCTGGGCGTTGAATACTGTCGCCGACGCGACTGGATGATAGACGC
CTTTTCGCAGCATTTTCGCGTCGGTTACGCGGCGAAGGCAAGCGGAACCC
TTGTCGCCCATCTCGGCGACGTCCCTATTTTCTCCTTTGTACCACCCACA
GGGGGTATGTTTATATGGGCATGCTTTAATCTGGCCCAGAATCCTGCCTT
CGAGCAGCTACGGCATGATGAGAACGTGGTTGATCCGGAGCAGGTCATGG
CCGACCGGCTTTGGCGGCAGTTCGCCGAGGCCAAGGTTCTCTTAACCCCG
GGGTCATATTATCATCCCTGGCAGGGGCCGGACAAGGTTACAACAAATGC
GCGCGGAGCTACACCCTTGACGACCTACTTTCGGTTTTCCTTCTCCATGA
CGACGCAAGAGGAGATGGAACGTGGTATTGCACGAATGGCTCAAGTGATA
CGGGCGTCGTGGAAGCTGGAGCAGTAGATGGCCCAATCCCAATTCACGAA
TGGGCTCCCCACAGCTGTTGACTTGGGCCACCATATCAATTCGAAATCCC
GGGCCCGACACCCAAGCCCTTTGAAGGACATTATCCAGTTCATGGCCGTT
GATGACATGGTCAGCTTGGCCGGAGGCCTTCCACATCCTTCTTTCTTCCC
ATTTAGGACAGTCATCGTGACAGCATCACCCCCAACAGCGGAGGAAAGTC
CCTGCTTGCTCGAACTACCCCTAGATGGCTTCTTGCAGTATGGGTCGGGA
ACAGGCAACGCACAACTGCGCGCCTGGTGCCGGGAGTTTACCCAGCGGGT
GCATCGACCAGCCTATGCCGACTGGACCGTGTTACTTCACCCCGGAAATA
CCAACGCATGGAGTAAAGTGGTCAGCTTGTTGTGTGAGACAGACGACTAC
ATATTGTGTGAGACTTACACCTATCCATCAGCACAGGCCTTCTGGATCCC
TCTGGGCATCAAAGCGGCCCCGGTTGCTTCAGATGCAGAAGGCATGCGTG
CTGATACTCTCGCTCAAACATTGCGCGATTGGGAAGATACTCACCCCGGC
ACCCGGCGGCCGCGTGTGCTGTATCTTGTCAGTGTCGGCTCTAACCCATC
GGGCGTCACGATGAGTACAAAGCGACGACGAGATGTTTACGATGTGTGTA
TTGAATACGATGTCATCATTGTGGAGGACGATCCGTACTTCTTCCTCCAG
TACCCGGAATACAATGCCGGTGACTCGGTCACGGAAGGCCCAGAATTCGT
CCCCAGCGATGAGTTCCTAAGGTCCTTGACACCGTCAATGCTCCAATTTG
ACCACCAGGGCCGTGTAATCCGGCTGGAGTCTTTTAGTAAAACGCTGGCA
CCGGGTCTGCGGCTCGGTTACTTTGTCGCAAATCCATTGTTTACCGAACG
ACTGCTGCGTGCGACCGAGGTTGAGACGCAGGACCCATCTGGCCTATCAC
AAGCACTTACCCTCCGCCTCATGCAAAGCTGGGGTATCGACGGCTATCTT
GGATGGCTGCAAGGGCTGGGCGTTGAATACTGTCGCCGACGCGACTGGAT
GATAGACGCCTTTTCGCAGCATTTTCGCGTCGGTTACGCGGCGAAGGCAA
GCGGAACCCTTGTCGCCCATCTCGGCGACGTCCCTATTTTCTCCTTTGTA
CCACCCACAGGGGGTATGTTTATATGGGCATGCTTTAATCTGGCCCAGAA
TCCTGCCTTCGAGCAGCTACGGCATGATGAGAACGTGGTTGATCCGGAGC
AGGTCATGGCCGACCGGCTTTGGCGGCAGTTCGCCGAGGCCAAGGTTCTC
TTAACCCCGGGGTCATATTATCATCCCTGGCAGGGGCCGGACAAGGTTAC
AACAAATGCGCGCGGAGCTACACCCTTGACGACCTACTTTCGGTTTTCCT
TCTCCATGACGACGCAAGAGGAGATGGAACGTGGTATTGCACGAATGGCT
CAAGTGATACGGGCGTCGTGGAAGCTGGAGCAGTAGATGGCCCAATCCCA
ATTCACGAATGGGCTCCCCACAGCTGTTGACTTGGGCCACCATATCAATT
CGAAATCCCGGGCCCGACACCCAAGCCCTTTGAAGGACATTATCCAGTTC
ATGGCCGTTGATGACATGGTCAGCTTGGCCGGAGGCCTTCCACATCCTTC
TTTCTTCCCATTTAGGACAGTCATCGTGACAGCATCACCCCCAACAGCGG
AGGAAAGTCCCTGCTTGCTCGAACTACCCCTAGATGGCTTCTTGCAGTAT
GGGTCGGGAACAGGCAACGCACAACTGCGCGCCTGGTGCCGGGAGTTTAC
CCAGCGGGTGCATCGACCAGCCTATGCCGACTGGACCGTGTTACTTCACC
CCGGAAATACCAACGCATGGAGTAAAGTGGTCAGCTTGTTGTGTGAGACA
GACGACTACATATTGTGTGAGACTTACACCTATCCATCAGCACAGGCCTT
CTGGATCCCTCTGGGCATCAAAGCGGCCCCGGTTGCTTCAGATGCAGAAG
GCATGCGTGCTGATACTCTCGCTCAAACATTGCGCGATTGGGAAGATACT
CACCCCGGCACCCGGCGGCCGCGTGTGCTGTATCTTGTCAGTGTCGGCTC
TAACCCATCGGGCGTCACGATGAGTACAAAGCGACGACGAGATGTTTACG
ATGTGTGTATTGAATACGATGTCATCATTGTGGAGGACGATCCGTACTTC
TTCCTCCAGTACCCGGAATACAATGCCGGTGACTCGGTCACGGAAGGCCC
AGAATTCGTCCCCAGCGATGAGTTCCTAAGGTCCTTGACACCGTCAATGC
TCCAATTTGACCACCAGGGCCGTGTAATCCGGCTGGAGTCTTTTAGTAAA
ACGCTGGCACCGGGTCTGCGGCTCGGTTACTTTGTCGCAAATCCATTGTT
TACCGAACGACTGCTGCGTGCGACCGAGGTTGAGACGCAGGACCCATCTG
GCCTATCACAAGCACTTACCCTCCGCCTCATGCAAAGCTGGGGTATCGAC
GGCTATCTTGGATGGCTGCAAGGGCTGGGCGTTGAATACTGTCGCCGACG
CGACTGGATGATAGACGCCTTTTCGCAGCATTTTCGCGTCGGTTACGCGG
CGAAGGCAAGCGGAACCCTTGTCGCCCATCTCGGCGACGTCCCTATTTTC
TCCTTTGTACCACCCACAGGGGGTATGTTTATATGGGCATGCTTTAATCT
GGCCCAGAATCCTGCCTTCGAGCAGCTACGGCATGATGAGAACGTGGTTG
ATCCGGAGCAGGTCATGGCCGACCGGCTTTGGCGGCAGTTCGCCGAGGCC
AAGGTTCTCTTAACCCCGGGGTCATATTATCATCCCTGGCAGGGGCCGGA
CAAGGTTACAACAAATGCGCGCGGAGCTACACCCTTGACGACCTACTTTC
GGTTTTCCTTCTCCATGACGACGCAAGAGGAGATGGAACGTGGTATTGCA
CGAATGGCTCAAGTGATACGGGCGTCGTGGAAGCTGGAGCAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009058 | biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030170 | pyridoxal phosphate binding |
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006629-T1.utr5p1 | KJC3_006629-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006629-T1.utr3p1 | KJC3_006629-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR015424 |
| DBxref | InterPro:IPR004839 |
| DBxref | InterPro:IPR015421 |
| DBxref | PFAM:PF00155 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:6213609..6216153 + |
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