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KJC3_006639-T1, KJC3_006639-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006639-T1
Unique NameKJC3_006639-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:6239360..6242630-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006639-T1 ID=KJC3_006639-T1|Name=KJC3_006639-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3271bp|location=Sequence derived from alignment at ch4:6239360..6242630- (Aspergillus niger KJC3)
AGGGCCGACTTGAATTATGCACAACCGTCGGGTTAAACGCTCATCGCTGG
CCTGCTTGCCCTGTCGCTCTCGGCATGCCAAATGTGATGGGAAGCGACCG
AGCTGTACGCGCTGTGGCGAGGTCGGCCAGCGGTGCAGCTATGCCCCTTC
GCGGCGCGGTCTCGTCTCCCGGCACACACAAAGGACAGATTATCGCATGA
ACCATGGGAGCCCGCAACAAGATGCCAGCACATCTGGGTTTGGACTCAGT
ACGATGTCGTCCACCCCGGCAGGTATTCCCCCCAGGTCGGCCATGCTCAG
TGTCGATCTGGGTGACCCCAGTACGGACGGTATTCCTCCCTCAGGGAACT
CCTCCCGGTCGGAGAATATTGCAGATGATCCCTTGATCCACTCCTACTAC
AAGGACTTTCACATATGCCATCCATTTGTCCCACCACGGAAACATCTTGT
AGACCTATGTCGAGACCCTCGCACAGAGCATGCGCTTGCACCCTTAATTG
CCGCTATGCGCTTCATGGGAAATATCTACAGTGCGCGGGAATGGTCGGTC
CCACTCAAAGACACAGTCGAATCTACCCTTTCCCACTTGTCGCCGTCTGA
TCCGATTCAAGTTCAGTGTCGAATCTTGTACTCCGTAGCCTTATTCTGGT
ATGACTACAATGCCGATGCGCAGTCACAATTGGACCAGGCGGCTCAGATC
GCCATTGGCCTGCACATGTTCAAGGCGGAATTTGCAGCGTCCCAGGAAGC
CAACGACCAGGTATTGAGGGAATCTTGGAGGCGCACGTGGTGGATGCTGT
ACATTGTAGATGCCTACTACGCCGGCACCCTGGGGACGATGAATTTTAGG
GTCATGGATCTTGACGTGACCGTCGAATTGCCCTGCGACGAGTCCGATTA
CGAGTTGGGGGTAAGTGCGAACGCTCTCAATCCCATTTACCAGTACTGGG
TTGGCTCATGCTAGATGTTGAGTTGAAAGGTCATTCCCAGCCCCAGGACT
CTTGAGGATTTCAATCAACGTGAATTCCTCTCCGACGATGTTCACTTCTC
CTCTTTTGCATATCTCATTGGCGCCGTGCAGTGCGCCGCATCTGCTATAT
CCATAACCCCCAAGGTGGCAACTGTAGAAGACTCCATGCATGTGATCGAA
GCGGTTGATTGTGGCTTGGATGGATGGCGACTACTATTACCCCCGGAGCA
GAAACACGTCATCAAGGCAGATGGGGAGATCGACGAGCTCTTGTTCCAAG
CACATCTGCTTATCCATGTGTAAGCTTCACGTTCCTTCCTTGCAAGTCCC
GCCACTCACTAGCTAGATCCACTATTGGCCTCCATCGTCCGTTGTCGGCC
CTCGATTTCAATGCCATCGAGAACGTATCCAGCTGTGCCCGGGAGCCTCC
CCGGGACACACCCACGCCCGATCTAGTAAACGTCCATACCATCCGCGTCT
TGCGGGCGGTCAAGGCTCAGATCGGTCTCCTGGCTTTACCGGCCTCAAGA
TTTCACCACACACCTTTCACCACATGTATGGTCAGCGAGGGGATACTGGC
GCTTCTCTCCGCTTGCAGTACTCTTCTCAAGGGGAGAGATCTTGGCATCG
CAAGAGACCAGATCCGGATGACGCTCGGGTGTCTCAAGGTCCTGGGAGAA
GTCTGGCCGAGGACAGCGAGGAATGTATTCGAGATTCAGACGATCGCTCG
GTGTGTCCTGGGCCTCGGGCGAGGTCCCACTGATCAGGGTATACTTGGAG
CCAGTGGTCTGTCGTCTTTCGGTGCAAACGAGGTGGATCCAAAACCGGTC
ACCGACAGTCTGTCGAAACACGACAACGACCCGGGCACTTCCGTCTGTGC
GATTGAAGATCTCTGCGGCTGGTACACTACTGAAGCAGATGAATTTTCAT
GGGGACTGATTGATGGATTATGATTGACTAATTGGTCATGGCACAGAGAC
CAAACCTAAATGAGCCGATAATAGGATTCGGCATTGACAGTCCAACAAGA
ATACGTCAGACGGCAAGAATTACCTTCCCACGCCCATACGCCCTTCCATT
TGCCATATCATACGCTTCACGGGCTCGAGCAAGTGGATAGATGTCTGCGA
CGAGAGGCCGGACGGCTCCATGACTTGCCGCTTCGGCAAGGTAGTGCAAT
GCATCTAGACTGCCCCTGACAATGAAGAACAGCGCATGTACCCCGGCCTT
GCGAAGTCCACGCTTCTCATGCTCCTTGACGAAGTTGAAGCTTGCCGAAT
CCACTGAAATCAGCACTCCTGTGTCAGCGACGTATTCCCAACACTTCTCC
AATACTTTCCCGCCAACGGCATCGACGATGACATCGAACTCCCCGCGACG
CTCGTCCAGCGTGCTATACTCCACGACCTCGTCGGCCCCAAGGTCTTGAA
GAAAGTCGCGGTTGCGGGCATTGGAGCTGCTAGCGGCGACAACTTTTACC
CCTGCCGCTGCGGCCAACTGCACGAGATACACGCCCACCGCCCCCGCGGC
ACCAGTAATTAGCACAGAGTACTCCTTCGTAGCGGAGTGGGTCGTGAACT
CTGCCACCGTGGGTCGGGGAATACGTGCGTGCTCAAATAGGGCCTCGTAG
GCAGTTTGTGCGCTGAGGGGGATTGCTGCCGCCTCGGCGAATGTTAATGT
AGAGGGCTTCCGGGCTACCTCCTCCTCCTTGACGATGGTGTATTCAGCCC
AGGTAGCTGCCCGGGCAGCATTGGTCATGCCGAAGACCTCGTCGCCGGGC
TTGAACTGGCTCGTGGATGAGAACACCTCCACCACAATACCGGCCACATC
GTTGCCCAAGATGGCATACTCGTGTGTATAGGATTCCGGCCAAGTGAGCA
TGTCCCGAATGACGGTTGTTGCTTTGACGCGGATGAGAAGCTCCCCGGGC
GCAGAGGGCACCGGAATGGGGACATCTCGGTCTAGCCGCAGGGCAGTGGA
TGGCGCCGGGTTCGCTGGTGAATAGGGTGTGGATGTCGGTGAAGCAGGAT
GAAGACGGATAGCTTCCATGATGCTGGCTGGGGAAGGAGATGAGGTGGAA
GCTTTCCCAGAATTGCTTTCACCGTGGGTCAACTTATAGAAAGAAACCTT
GCGGTTGGTGGTTGCGTCACGTGCTTGTATAGCCTATGAATAGGCTATCG
GATACGAACGTCTAGGGGGCCATCGCATCCAATGAAGACCGATAGTTGAA
CCCCGCTTGCGTTATTTAAAAAATATTCTAGGGACTATCTTATATGTGTA
GTATACCTTTCGAAGTCAGAG
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Coding sequence (CDS) from alignment at ch4:6239360..6242630-

>KJC3_006639-T1 ID=KJC3_006639-T1|Name=KJC3_006639-T1|organism=Aspergillus niger KJC3|type=CDS|length=5373bp|location=Sequence derived from alignment at ch4:6239360..6242630- (Aspergillus niger KJC3)
ATCCACTATTGGCCTCCATCGTCCGTTGTCGGCCCTCGATTTCAATGCCA
TCGAGAACGTATCCAGCTGTGCCCGGGAGCCTCCCCGGGACACACCCACG
CCCGATCTAGTAAACGTCCATACCATCCGCGTCTTGCGGGCGGTCAAGGC
TCAGATCGGTCTCCTGGCTTTACCGGCCTCAAGATTTCACCACACACCTT
TCACCACATGTATGGTCAGCGAGGGGATACTGGCGCTTCTCTCCGCTTGC
AGTACTCTTCTCAAGGGGAGAGATCTTGGCATCGCAAGAGACCAGATCCG
GATGACGCTCGGGTGTCTCAAGGTCCTGGGAGAAGTCTGGCCGAGGACAG
CGAGGAATGTATTCGAGATTCAGACGATCGCTCGGTGTGTCCTGGGCCTC
GGGCGAGGTCCCACTGATCAGGGTATACTTGGAGCCAGTGGTCTGTCGTC
TTTCGGTGCAAACGAGGTGGATCCAAAACCGGTCACCGACAGTCTGTCGA
AACACGACAACGACCCGGGCACTTCCGTCTGTGCGATTGAAGATCTCTGC
GGCTGGTACACTACTGAAGCAGATGAATTTTCATGGGGACTGATTGATGG
ATTATGAGTCATTCCCAGCCCCAGGACTCTTGAGGATTTCAATCAACGTG
AATTCCTCTCCGACGATGTTCACTTCTCCTCTTTTGCATATCTCATTGGC
GCCGTGCAGTGCGCCGCATCTGCTATATCCATAACCCCCAAGGTGGCAAC
TGTAGAAGACTCCATGCATGTGATCGAAGCGGTTGATTGTGGCTTGGATG
GATGGCGACTACTATTACCCCCGGAGCAGAAACACGTCATCAAGGCAGAT
GGGGAGATCGACGAGCTCTTGTTCCAAGCACATCTGCTTATCCATGTATG
CACAACCGTCGGGTTAAACGCTCATCGCTGGCCTGCTTGCCCTGTCGCTC
TCGGCATGCCAAATGTGATGGGAAGCGACCGAGCTGTACGCGCTGTGGCG
AGGTCGGCCAGCGGTGCAGCTATGCCCCTTCGCGGCGCGGTCTCGTCTCC
CGGCACACACAAAGGACAGATTATCGCATGAACCATGGGAGCCCGCAACA
AGATGCCAGCACATCTGGGTTTGGACTCAGTACGATGTCGTCCACCCCGG
CAGGTATTCCCCCCAGGTCGGCCATGCTCAGTGTCGATCTGGGTGACCCC
AGTACGGACGGTATTCCTCCCTCAGGGAACTCCTCCCGGTCGGAGAATAT
TGCAGATGATCCCTTGATCCACTCCTACTACAAGGACTTTCACATATGCC
ATCCATTTGTCCCACCACGGAAACATCTTGTAGACCTATGTCGAGACCCT
CGCACAGAGCATGCGCTTGCACCCTTAATTGCCGCTATGCGCTTCATGGG
AAATATCTACAGTGCGCGGGAATGGTCGGTCCCACTCAAAGACACAGTCG
AATCTACCCTTTCCCACTTGTCGCCGTCTGATCCGATTCAAGTTCAGTGT
CGAATCTTGTACTCCGTAGCCTTATTCTGGTATGACTACAATGCCGATGC
GCAGTCACAATTGGACCAGGCGGCTCAGATCGCCATTGGCCTGCACATGT
TCAAGGCGGAATTTGCAGCGTCCCAGGAAGCCAACGACCAGGTATTGAGG
GAATCTTGGAGGCGCACGTGGTGGATGCTGTACATTGTAGATGCCTACTA
CGCCGGCACCCTGGGGACGATGAATTTTAGGGTCATGGATCTTGACGTGA
CCGTCGAATTGCCCTGCGACGAGTCCGATTACGAGTTGGGGATCCACTAT
TGGCCTCCATCGTCCGTTGTCGGCCCTCGATTTCAATGCCATCGAGAACG
TATCCAGCTGTGCCCGGGAGCCTCCCCGGGACACACCCACGCCCGATCTA
GTAAACGTCCATACCATCCGCGTCTTGCGGGCGGTCAAGGCTCAGATCGG
TCTCCTGGCTTTACCGGCCTCAAGATTTCACCACACACCTTTCACCACAT
GTATGGTCAGCGAGGGGATACTGGCGCTTCTCTCCGCTTGCAGTACTCTT
CTCAAGGGGAGAGATCTTGGCATCGCAAGAGACCAGATCCGGATGACGCT
CGGGTGTCTCAAGGTCCTGGGAGAAGTCTGGCCGAGGACAGCGAGGAATG
TATTCGAGATTCAGACGATCGCTCGGTGTGTCCTGGGCCTCGGGCGAGGT
CCCACTGATCAGGGTATACTTGGAGCCAGTGGTCTGTCGTCTTTCGGTGC
AAACGAGGTGGATCCAAAACCGGTCACCGACAGTCTGTCGAAACACGACA
ACGACCCGGGCACTTCCGTCTGTGCGATTGAAGATCTCTGCGGCTGGTAC
ACTACTGAAGCAGATGAATTTTCATGGGGACTGATTGATGGATTATGAGT
CATTCCCAGCCCCAGGACTCTTGAGGATTTCAATCAACGTGAATTCCTCT
CCGACGATGTTCACTTCTCCTCTTTTGCATATCTCATTGGCGCCGTGCAG
TGCGCCGCATCTGCTATATCCATAACCCCCAAGGTGGCAACTGTAGAAGA
CTCCATGCATGTGATCGAAGCGGTTGATTGTGGCTTGGATGGATGGCGAC
TACTATTACCCCCGGAGCAGAAACACGTCATCAAGGCAGATGGGGAGATC
GACGAGCTCTTGTTCCAAGCACATCTGCTTATCCATGTATGCACAACCGT
CGGGTTAAACGCTCATCGCTGGCCTGCTTGCCCTGTCGCTCTCGGCATGC
CAAATGTGATGGGAAGCGACCGAGCTGTACGCGCTGTGGCGAGGTCGGCC
AGCGGTGCAGCTATGCCCCTTCGCGGCGCGGTCTCGTCTCCCGGCACACA
CAAAGGACAGATTATCGCATGAACCATGGGAGCCCGCAACAAGATGCCAG
CACATCTGGGTTTGGACTCAGTACGATGTCGTCCACCCCGGCAGGTATTC
CCCCCAGGTCGGCCATGCTCAGTGTCGATCTGGGTGACCCCAGTACGGAC
GGTATTCCTCCCTCAGGGAACTCCTCCCGGTCGGAGAATATTGCAGATGA
TCCCTTGATCCACTCCTACTACAAGGACTTTCACATATGCCATCCATTTG
TCCCACCACGGAAACATCTTGTAGACCTATGTCGAGACCCTCGCACAGAG
CATGCGCTTGCACCCTTAATTGCCGCTATGCGCTTCATGGGAAATATCTA
CAGTGCGCGGGAATGGTCGGTCCCACTCAAAGACACAGTCGAATCTACCC
TTTCCCACTTGTCGCCGTCTGATCCGATTCAAGTTCAGTGTCGAATCTTG
TACTCCGTAGCCTTATTCTGGTATGACTACAATGCCGATGCGCAGTCACA
ATTGGACCAGGCGGCTCAGATCGCCATTGGCCTGCACATGTTCAAGGCGG
AATTTGCAGCGTCCCAGGAAGCCAACGACCAGGTATTGAGGGAATCTTGG
AGGCGCACGTGGTGGATGCTGTACATTGTAGATGCCTACTACGCCGGCAC
CCTGGGGACGATGAATTTTAGGGTCATGGATCTTGACGTGACCGTCGAAT
TGCCCTGCGACGAGTCCGATTACGAGTTGGGGATCCACTATTGGCCTCCA
TCGTCCGTTGTCGGCCCTCGATTTCAATGCCATCGAGAACGTATCCAGCT
GTGCCCGGGAGCCTCCCCGGGACACACCCACGCCCGATCTAGTAAACGTC
CATACCATCCGCGTCTTGCGGGCGGTCAAGGCTCAGATCGGTCTCCTGGC
TTTACCGGCCTCAAGATTTCACCACACACCTTTCACCACATGTATGGTCA
GCGAGGGGATACTGGCGCTTCTCTCCGCTTGCAGTACTCTTCTCAAGGGG
AGAGATCTTGGCATCGCAAGAGACCAGATCCGGATGACGCTCGGGTGTCT
CAAGGTCCTGGGAGAAGTCTGGCCGAGGACAGCGAGGAATGTATTCGAGA
TTCAGACGATCGCTCGGTGTGTCCTGGGCCTCGGGCGAGGTCCCACTGAT
CAGGGTATACTTGGAGCCAGTGGTCTGTCGTCTTTCGGTGCAAACGAGGT
GGATCCAAAACCGGTCACCGACAGTCTGTCGAAACACGACAACGACCCGG
GCACTTCCGTCTGTGCGATTGAAGATCTCTGCGGCTGGTACACTACTGAA
GCAGATGAATTTTCATGGGGACTGATTGATGGATTATGAGTCATTCCCAG
CCCCAGGACTCTTGAGGATTTCAATCAACGTGAATTCCTCTCCGACGATG
TTCACTTCTCCTCTTTTGCATATCTCATTGGCGCCGTGCAGTGCGCCGCA
TCTGCTATATCCATAACCCCCAAGGTGGCAACTGTAGAAGACTCCATGCA
TGTGATCGAAGCGGTTGATTGTGGCTTGGATGGATGGCGACTACTATTAC
CCCCGGAGCAGAAACACGTCATCAAGGCAGATGGGGAGATCGACGAGCTC
TTGTTCCAAGCACATCTGCTTATCCATGTATGCACAACCGTCGGGTTAAA
CGCTCATCGCTGGCCTGCTTGCCCTGTCGCTCTCGGCATGCCAAATGTGA
TGGGAAGCGACCGAGCTGTACGCGCTGTGGCGAGGTCGGCCAGCGGTGCA
GCTATGCCCCTTCGCGGCGCGGTCTCGTCTCCCGGCACACACAAAGGACA
GATTATCGCATGAACCATGGGAGCCCGCAACAAGATGCCAGCACATCTGG
GTTTGGACTCAGTACGATGTCGTCCACCCCGGCAGGTATTCCCCCCAGGT
CGGCCATGCTCAGTGTCGATCTGGGTGACCCCAGTACGGACGGTATTCCT
CCCTCAGGGAACTCCTCCCGGTCGGAGAATATTGCAGATGATCCCTTGAT
CCACTCCTACTACAAGGACTTTCACATATGCCATCCATTTGTCCCACCAC
GGAAACATCTTGTAGACCTATGTCGAGACCCTCGCACAGAGCATGCGCTT
GCACCCTTAATTGCCGCTATGCGCTTCATGGGAAATATCTACAGTGCGCG
GGAATGGTCGGTCCCACTCAAAGACACAGTCGAATCTACCCTTTCCCACT
TGTCGCCGTCTGATCCGATTCAAGTTCAGTGTCGAATCTTGTACTCCGTA
GCCTTATTCTGGTATGACTACAATGCCGATGCGCAGTCACAATTGGACCA
GGCGGCTCAGATCGCCATTGGCCTGCACATGTTCAAGGCGGAATTTGCAG
CGTCCCAGGAAGCCAACGACCAGGTATTGAGGGAATCTTGGAGGCGCACG
TGGTGGATGCTGTACATTGTAGATGCCTACTACGCCGGCACCCTGGGGAC
GATGAATTTTAGGGTCATGGATCTTGACGTGACCGTCGAATTGCCCTGCG
ACGAGTCCGATTACGAGTTGGGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006639KJC3_006639Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006639-T1KJC3_006639-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006639-T1.cdsKJC3_006639-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006639-T1.utr3p1KJC3_006639-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006639-T1.exon3KJC3_006639-T1.exon3Aspergillus niger KJC3exon
KJC3_006639-T1.exon2KJC3_006639-T1.exon2Aspergillus niger KJC3exon
KJC3_006639-T1.exon1KJC3_006639-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006639-T1.utr5p1KJC3_006639-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR007219
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:6239360..6242630 -
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