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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:6248195..6249457- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006641-T1 ID=KJC3_006641-T1|Name=KJC3_006641-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1263bp|location=Sequence derived from alignment at ch4:6248195..6249457- (Aspergillus niger KJC3)
ATGACCAAAACCAGCAGCGATGATGTATCCCAAGCTCAGATTCCTCTTTC
CCCTCCCCCAGTCAAACCACCACCCGATGGGGGCCTGCAGGCATGGACCC
AATCTGTTATGGGCCACCTGGTATGCTTCAACACCTGGGGCTATCTGGCC
AGCTTCGGGGTCTTCCAATCGTACTATCAAAACGAGCTGGGGGTGTCTGA
GTCCGCCATCTCGTGGGTGGGGTCTATTCAAATCTTTCTCATCTTCTTTG
TCGGCACTTTTTCCGGCCGAGCCCTCGATGCTGGCCTGTTCCGCCCTGTC
TTCTGCGCTGGTGTTCTCCTGCAGGTGCTGGGGGTCTTCATGACCTCGCT
TGCCACCCGCTACTGGCAGCTCATCCTCGCCCAGGGACTCTGTACGGGGC
TGGGGAGCGGCTTGCAATTCTGCCCGACCATGGGCCTTGTGGCCACGTAC
TTTGACCAACGACGCGTCTTCGCGGTGGCATTTGCCCTGGTCGGCAGCGG
GACAGGGGGAATGGTGTTCCCCGGCCTGGTGAAGGGCCTGCTCCCAATTA
TTGGGTTTGGTTGGACGATGCGTGTTGTGGGATTCGTCATGCTCGCCACC
AGCCTACCTGCAATAGGTCTCCTACAGGCACGACTCCCGCCGCGCAAGTC
CGGGCCCCTAGTGGAGCTGGCTGCCTTCCGTGATCCTGTATACACGCTCT
TCATTGTGGGCATCTGGCTCAACTTTTGGGGCATGTATTTTGCTGTGTAC
TACCTGGGGGCGTTTGGGCGTACGGTCATCGGCTTCAGCTACTCCGAGTC
CACGAACCTGATCATTGTGTTGAACGGCGCAGCCGTCGTGGGCCGGTTGG
TCCCCGCATATTTAGCGTCCTTTCATCTGGGTCCGCTCAATACCATTATT
CCCCTGGCGGTGGCCGCCGGTGTGCTGATGCTCTGTTGGGCGGCGGTCCA
CTCGTCTGCGGGGCTGTACGTCTTTGCAGTGTTATACGGATTTTGCGCCA
ACGGGCTACAAGGCATGTGGCCACCGACGCTGTCAAGCTTGATCACGGAC
CTGAGTAGGGCTGGAACACGGATCGGCATGGGGTTCACAATAGTGAGTTT
CGCGTGTCTGACAGGGCCGCCATTGGGCGGTGCTCTCGTCGCCAAGGCGC
ATGGTTACATTGGAGCGCAGATTTGGGCGGGCGTGGCCATCTTACTGGGG
GCCTTGGTGCTTCTCGGTGCGCGAACAGCCAAGGAGGGCTGGCGTATTCC
AGTCAAGGTGTGA back to topCoding sequence (CDS) from alignment at ch4:6248195..6249457- >KJC3_006641-T1 ID=KJC3_006641-T1|Name=KJC3_006641-T1|organism=Aspergillus niger KJC3|type=CDS|length=1263bp|location=Sequence derived from alignment at ch4:6248195..6249457- (Aspergillus niger KJC3)
ATGACCAAAACCAGCAGCGATGATGTATCCCAAGCTCAGATTCCTCTTTC
CCCTCCCCCAGTCAAACCACCACCCGATGGGGGCCTGCAGGCATGGACCC
AATCTGTTATGGGCCACCTGGTATGCTTCAACACCTGGGGCTATCTGGCC
AGCTTCGGGGTCTTCCAATCGTACTATCAAAACGAGCTGGGGGTGTCTGA
GTCCGCCATCTCGTGGGTGGGGTCTATTCAAATCTTTCTCATCTTCTTTG
TCGGCACTTTTTCCGGCCGAGCCCTCGATGCTGGCCTGTTCCGCCCTGTC
TTCTGCGCTGGTGTTCTCCTGCAGGTGCTGGGGGTCTTCATGACCTCGCT
TGCCACCCGCTACTGGCAGCTCATCCTCGCCCAGGGACTCTGTACGGGGC
TGGGGAGCGGCTTGCAATTCTGCCCGACCATGGGCCTTGTGGCCACGTAC
TTTGACCAACGACGCGTCTTCGCGGTGGCATTTGCCCTGGTCGGCAGCGG
GACAGGGGGAATGGTGTTCCCCGGCCTGGTGAAGGGCCTGCTCCCAATTA
TTGGGTTTGGTTGGACGATGCGTGTTGTGGGATTCGTCATGCTCGCCACC
AGCCTACCTGCAATAGGTCTCCTACAGGCACGACTCCCGCCGCGCAAGTC
CGGGCCCCTAGTGGAGCTGGCTGCCTTCCGTGATCCTGTATACACGCTCT
TCATTGTGGGCATCTGGCTCAACTTTTGGGGCATGTATTTTGCTGTGTAC
TACCTGGGGGCGTTTGGGCGTACGGTCATCGGCTTCAGCTACTCCGAGTC
CACGAACCTGATCATTGTGTTGAACGGCGCAGCCGTCGTGGGCCGGTTGG
TCCCCGCATATTTAGCGTCCTTTCATCTGGGTCCGCTCAATACCATTATT
CCCCTGGCGGTGGCCGCCGGTGTGCTGATGCTCTGTTGGGCGGCGGTCCA
CTCGTCTGCGGGGCTGTACGTCTTTGCAGTGTTATACGGATTTTGCGCCA
ACGGGCTACAAGGCATGTGGCCACCGACGCTGTCAAGCTTGATCACGGAC
CTGAGTAGGGCTGGAACACGGATCGGCATGGGGTTCACAATAGTGAGTTT
CGCGTGTCTGACAGGGCCGCCATTGGGCGGTGCTCTCGTCGCCAAGGCGC
ATGGTTACATTGGAGCGCAGATTTGGGCGGGCGTGGCCATCTTACTGGGG
GCCTTGGTGCTTCTCGGTGCGCGAACAGCCAAGGAGGGCTGGCGTATTCC
AGTCAAGGTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:6248195..6249457 - |
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